Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0426
         (594 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    24   1.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   5.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   5.9  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   7.8  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 398 TSLTKRTYATVVQGIAKISIYRFMTISCGHTHD 496
           T L   T  TV+    +I  ++F+TI  G T D
Sbjct: 46  TYLILLTTWTVISASTRIKSFKFLTIGVGITTD 78


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 460 SFYDNIVRPYP 492
           +FY N+VRP+P
Sbjct: 324 TFYLNVVRPFP 334


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 263 FQIQRYDWK 289
           F++QRY WK
Sbjct: 39  FEVQRYTWK 47


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -3

Query: 433 DYCCVCPLSQTRQSLDV 383
           DY C CP   T ++ ++
Sbjct: 438 DYACYCPPKHTGKNCEI 454


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 454 YISFYDNIVRPYP 492
           Y+ FY    RPYP
Sbjct: 252 YVPFYRYCYRPYP 264


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,115
Number of Sequences: 336
Number of extensions: 3007
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)