Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0426
         (594 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    29   0.15 
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    26   1.1  
AF457557-1|AAL68787.1|   90|Anopheles gambiae hypothetical prote...    24   3.2  
AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal ...    24   4.3  
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    24   4.3  
AJ618921-1|CAF02000.1|  172|Anopheles gambiae putative odorant-b...    24   4.3  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   9.8  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 28.7 bits (61), Expect = 0.15
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 4   EDTVEQKMVLLLGHAVLEADSSFCRFR 84
           E T++ ++VLL  H V + DSS C  R
Sbjct: 615 EGTIDYEVVLLAVHCVFKRDSSVCTLR 641


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 10/28 (35%), Positives = 20/28 (71%)
 Frame = -1

Query: 153 KVTHGITALYRDYLFSICLGSVVTESAK 70
           K+T G+T L    +FS+ +G V+T++++
Sbjct: 262 KLTLGLTILVSQTVFSLLVGHVITKTSE 289


>AF457557-1|AAL68787.1|   90|Anopheles gambiae hypothetical protein
           10 protein.
          Length = 90

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -3

Query: 136 HRALSRLSFFDMSRLSSYGICKRKNPPQGRRDLTARPFFVLQ 11
           H A +RLS     +L  + +CKR NP     D   R    LQ
Sbjct: 39  HLAANRLSL----QLEEFAVCKRSNPGYDCSDSIHRAISDLQ 76


>AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal
           carrier protein A5 protein.
          Length = 211

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -2

Query: 338 FFIFKCPSQIVFSLFIFSNR 279
           F ++K PS+IVF+  + S+R
Sbjct: 146 FLVYKQPSRIVFNETVLSSR 165


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 12/54 (22%), Positives = 21/54 (38%)
 Frame = +2

Query: 419 YATVVQGIAKISIYRFMTISCGHTHDVRLTRLRGGAFSSQARRRPNSYSFSLTC 580
           + T+ +    I I+     SC    +    +  G   ++ A + PNS    L C
Sbjct: 20  WQTLAEDCMDIKIFTTKVASCCQLEEFLTLKTYGNCLNTMAEKYPNSTLDYLVC 73


>AJ618921-1|CAF02000.1|  172|Anopheles gambiae putative
           odorant-binding protein OBP5479 protein.
          Length = 172

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 12/54 (22%), Positives = 21/54 (38%)
 Frame = +2

Query: 419 YATVVQGIAKISIYRFMTISCGHTHDVRLTRLRGGAFSSQARRRPNSYSFSLTC 580
           + T+ +    I I+     SC    +    +  G   ++ A + PNS    L C
Sbjct: 20  WQTLAEDCMDIKIFTTKVASCCQLEEFLTLKTYGNCLNTMAEKYPNSTLDYLVC 73


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -1

Query: 93  SVVTESAKGRIRLKDGVT*QQDHFLFYSIL 4
           S+ T + KG +RL   +  ++ HF   ++L
Sbjct: 219 SISTSNGKGVVRLARALDYERQHFYHINVL 248


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,767
Number of Sequences: 2352
Number of extensions: 11842
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)