Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0424
         (678 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   2.2  
AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative deoxynucl...    24   3.8  
AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate deo...    24   3.8  
AY045760-2|AAK84943.1|  169|Anopheles gambiae D7-related 3 prote...    23   8.9  
AJ133854-1|CAB39729.1|  169|Anopheles gambiae D7-related 3 prote...    23   8.9  

>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +1

Query: 172 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLH 273
           +L+ E L  G   CN +  K CGK   HIR   H
Sbjct: 487 RLTFERLSGG---CNLHRCKLCGKVVTHIRNHYH 517


>AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative
           deoxynucleoside kinase protein.
          Length = 245

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +2

Query: 521 SMNVMSLRSC-VKRAASLMTAALCSTARNMDLSTLGGRFRLRSSMYNLINTFY 676
           ++ ++ + +C   ++  LM  +L S ARN  + ++     L   MYN++  +Y
Sbjct: 80  TLTMLDMHTCQTDKSVKLMERSLFS-ARNCFVESMLASGSLHQGMYNVLQEWY 131


>AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate
           deoxyribonucleoside kinaseprotein.
          Length = 246

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +2

Query: 521 SMNVMSLRSC-VKRAASLMTAALCSTARNMDLSTLGGRFRLRSSMYNLINTFY 676
           ++ ++ + +C   ++  LM  +L S ARN  + ++     L   MYN++  +Y
Sbjct: 80  TLTMLDMHTCQTDKSVKLMERSLFS-ARNCFVESMLASGSLHQGMYNVLQEWY 131


>AY045760-2|AAK84943.1|  169|Anopheles gambiae D7-related 3 protein
           protein.
          Length = 169

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -1

Query: 498 YVDLLTSGELELGT 457
           YV+LL +G+L++GT
Sbjct: 136 YVELLRAGKLDMGT 149


>AJ133854-1|CAB39729.1|  169|Anopheles gambiae D7-related 3 protein
           protein.
          Length = 169

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -1

Query: 498 YVDLLTSGELELGT 457
           YV+LL +G+L++GT
Sbjct: 136 YVELLRAGKLDMGT 149


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 794,044
Number of Sequences: 2352
Number of extensions: 17370
Number of successful extensions: 34
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)