Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0423
(359 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G9.03 |adk1||adenylate kinase Adk1|Schizosaccharomyces pomb... 78 4e-16
SPCC1795.05c |||uridylate kinase|Schizosaccharomyces pombe|chr 3... 56 1e-09
SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces pom... 34 0.006
SPBC1271.02 |stt3||oligosaccharyltransferase subunit Stt3|Schizo... 33 0.013
SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr 3... 31 0.041
SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit... 29 0.16
SPBC3B9.15c |scp1||sterol regulatory element binding protein Scp... 26 1.5
SPCC162.11c |||uridine kinase |Schizosaccharomyces pombe|chr 3||... 26 2.0
SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase... 26 2.0
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 2.0
SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces pomb... 26 2.0
SPCC338.15 |||dolichyl-di-phosphooligosaccharide-protein glycotr... 26 2.0
SPBC3H7.13 |||FHA domain protein Far10 |Schizosaccharomyces pomb... 25 3.5
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 25 4.7
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 24 6.2
SPAC1639.01c ||SPAC806.09c|GNS1/SUR4 family protein|Schizosaccha... 24 6.2
SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyce... 24 6.2
SPCC14G10.01 ||SPCC18B5.12|dephospho-CoA kinase |Schizosaccharom... 24 6.2
SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 24 8.2
SPBC12C2.07c |||spermidine synthase |Schizosaccharomyces pombe|c... 24 8.2
>SPAC4G9.03 |adk1||adenylate kinase Adk1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 220
Score = 78.2 bits (184), Expect = 4e-16
Identities = 37/79 (46%), Positives = 55/79 (69%)
Frame = +1
Query: 28 LKALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVP 207
++ +++G P +GKGT + I KKY I H+++GD LR +A+QTELGKE K +D+G LV
Sbjct: 4 MRLILVGPPGAGKGTQAPNIQKKYGIAHLATGDMLRSQVARQTELGKEAKKIMDQGGLVS 63
Query: 208 DDLMIKFMIKELKEVNNKP 264
DD+ + MIK+ E+ N P
Sbjct: 64 DDI-VTGMIKD--EILNNP 79
>SPCC1795.05c |||uridylate kinase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 191
Score = 56.4 bits (130), Expect = 1e-09
Identities = 26/76 (34%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Frame = +1
Query: 40 ILGAPASGKGTISSRIVKKYN-IEHVSSGDKLRDHIAKQ-TELGKEVKAYLDEGKLVPDD 213
+LG P +GKGT R+ +K++ H+S+GD LR+ + ++ G +K Y+ +GK+VP +
Sbjct: 7 VLGGPGAGKGTQCDRLAEKFDKFVHISAGDCLREEQNRPGSKYGNLIKEYIKDGKIVPME 66
Query: 214 LMIKFMIKELKEVNNK 261
+ I + ++KE ++K
Sbjct: 67 ITISLLETKMKECHDK 82
>SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 592
Score = 34.3 bits (75), Expect = 0.006
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +1
Query: 10 FGTRKLLKALILGAPASGKGTISSRIVK-----KYNIEHVSSGDKLRD 138
+G R+ L +++G PA+GK I S++ + KYN S GDK R+
Sbjct: 138 YGIREKLIIILVGIPATGKSYIGSKLSRYYNWLKYNCRFFSVGDKRRE 185
>SPBC1271.02 |stt3||oligosaccharyltransferase subunit
Stt3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 752
Score = 33.1 bits (72), Expect = 0.013
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Frame = -1
Query: 311 SISLFYCSREIHSKSHGLLLTSFNSFIMNLIIKSSGTSFPSSRYALTSLPSSVCFAMWSL 132
+I+ +Y +RE+ S + GLL +F +S S+ + A+T L S+ FA+W
Sbjct: 134 AIATYYLARELKSDACGLLAAAFMGIAPGYTSRSVAGSYDNEAIAITLLMST--FALWIK 191
Query: 131 SL----SPLDTCS-ILYFFTI 84
++ S C+ +LYF+ +
Sbjct: 192 AVKSGSSFWGACTGLLYFYMV 212
>SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 175
Score = 31.5 bits (68), Expect = 0.041
Identities = 11/41 (26%), Positives = 26/41 (63%)
Frame = +1
Query: 19 RKLLKALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDH 141
R+L +I G P +GK T++ ++ + +E++ GD ++++
Sbjct: 6 RELPNIIICGTPGTGKTTLAEQVAETTELENICIGDVVKEN 46
>SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit
Gpa2 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 354
Score = 29.5 bits (63), Expect = 0.16
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 19 RKLLKALILGAPASGKGTISSRI 87
+K+ K L+LGA SGK TIS +I
Sbjct: 32 KKIYKVLLLGASDSGKSTISKQI 54
>SPBC3B9.15c |scp1||sterol regulatory element binding protein
Scp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1086
Score = 26.2 bits (55), Expect = 1.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 113 TCSILYFFTIRDDIVPFPDA 54
TCS+LYFF I P+P A
Sbjct: 279 TCSLLYFFERTGPICPWPMA 298
>SPCC162.11c |||uridine kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 454
Score = 25.8 bits (54), Expect = 2.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 19 RKLLKALILGAPASGKGTISSRIVKKYNIEHV 114
RK+ I G SGK +++ IVK N+ HV
Sbjct: 19 RKVRFIGIAGPSGSGKTSVAQLIVKALNLPHV 50
>SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase
Gpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1448
Score = 25.8 bits (54), Expect = 2.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 56 AGAPKINAFSSFLVPNSC 3
+GAPK+ AFSS + SC
Sbjct: 102 SGAPKLQAFSSIVQSRSC 119
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.8 bits (54), Expect = 2.0
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = -1
Query: 269 SHGLLLTSFNSFIMNLIIKSSGTSFPSSRYALTSLPSSVCFAMWSLSLSPLDTCSIL 99
+ GL + +SF+ ++I T FPSS PSS M+ + C+++
Sbjct: 1904 AEGLTMMESSSFMDSIISFIDSTCFPSSSRWFQYAPSSTACQMFDCFMCWFFGCTLI 1960
>SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 695
Score = 25.8 bits (54), Expect = 2.0
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 31 KALILGAPASGKGTISSRI 87
K L+LG P SGK T+ SR+
Sbjct: 282 KLLLLGPPKSGKKTLLSRL 300
>SPCC338.15 |||dolichyl-di-phosphooligosaccharide-protein
glycotransferase subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 437
Score = 25.8 bits (54), Expect = 2.0
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -3
Query: 243 QFLYHEFNH*IIRYKFSFVKVCFNLFAQFCLFC 145
QF ++EF + + + + CF++ F LFC
Sbjct: 386 QFFHNEFPR-FLPHAYPYYASCFSVLGAFLLFC 417
>SPBC3H7.13 |||FHA domain protein Far10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 25.0 bits (52), Expect = 3.5
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -1
Query: 353 YKIKYHIHRLNFP*SISLFYCSREIHSKSHGLLLTSFNSFIMNL--IIKSSGTSFPSSRY 180
YKI H ++ P +LF+ S+ + S+ H L ++ + + + S+GT +R
Sbjct: 27 YKIGRHTNKSTSPSPSNLFFNSK-VLSRQHAELWLDKDTLSVYIRDVKSSNGTFVNETRL 85
Query: 179 ALTSLPSSVC 150
+ + PS+ C
Sbjct: 86 SPENKPSAPC 95
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 24.6 bits (51), Expect = 4.7
Identities = 7/21 (33%), Positives = 15/21 (71%)
Frame = +1
Query: 40 ILGAPASGKGTISSRIVKKYN 102
++G P +GK T+ +V++Y+
Sbjct: 79 VMGPPGTGKSTLIKSLVRRYS 99
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 24.2 bits (50), Expect = 6.2
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 11/79 (13%)
Frame = -1
Query: 302 LFYCSREIHSKSHGLLLTSFNSFIM-NLIIKSS----------GTSFPSSRYALTSLPSS 156
+FY EI K+H L+ S + ++ N + SS G + L+ +P
Sbjct: 1272 VFYPPYEIIEKNHQLVGRSLSKAVLDNFFLLSSLSDNVRCRCCGIKHLPAHCPLSIVPLE 1331
Query: 155 VCFAMWSLSLSPLDTCSIL 99
+CF + S DTC +L
Sbjct: 1332 ICFLCGTPHFSGRDTCPML 1350
>SPAC1639.01c ||SPAC806.09c|GNS1/SUR4 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 24.2 bits (50), Expect = 6.2
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -3
Query: 210 IRYKFSFVKVCFNLFAQFCLFCYVVPELISTRHMLNIVFFHYT 82
+ Y+ F K C + L + IS+ +L IVF+H T
Sbjct: 223 VAYRLKFYKACMGHCSGHPLAAFCGLATISSYLVLFIVFYHNT 265
>SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 24.2 bits (50), Expect = 6.2
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +1
Query: 136 DHIAKQTELGKEVKAYLDEGKLVPDD 213
D ++ T + K +KAYL + L+P++
Sbjct: 366 DCVSDYTTMFKPIKAYLQKNFLIPEN 391
>SPCC14G10.01 ||SPCC18B5.12|dephospho-CoA kinase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 236
Score = 24.2 bits (50), Expect = 6.2
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +1
Query: 40 ILGAPASGKGTISSRIVKKYNIEHVSS 120
+ G+ A+GK T+S +KY+I+ + +
Sbjct: 6 LTGSIATGKSTVSREFQEKYHIKIIDA 32
>SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 538
Score = 23.8 bits (49), Expect = 8.2
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 133 RDHIAKQTELGKEV--KAYLDEGKLVPDDLMIKFMIKELK 246
+D AK + K++ K DEG+LVP + M+ + K LK
Sbjct: 497 QDEFAKGSVRIKQMGLKENSDEGQLVPREEMVSVLKKLLK 536
>SPBC12C2.07c |||spermidine synthase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 298
Score = 23.8 bits (49), Expect = 8.2
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -1
Query: 233 IMNLIIKSSGTSFPSSRYALTSLPS 159
+++ ++ + T FP+ RYA T++P+
Sbjct: 211 VISNVLTAVKTVFPNVRYAYTTIPT 235
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,372,313
Number of Sequences: 5004
Number of extensions: 26892
Number of successful extensions: 110
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 109
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 110009772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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