Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0423
(359 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0034 - 11435678-11435702,11435787-11435816,11436364-114365... 85 1e-17
06_01_0067 + 561910-561987,562698-562759,564293-564338,564701-56... 80 4e-16
08_01_0066 - 455589-455687,455902-455976,456531-456677,457158-45... 79 1e-15
07_03_1324 - 25825153-25825197,25825705-25825785,25825907-258259... 68 3e-12
06_01_0718 + 5233030-5233062,5233329-5233383,5233543-5233660,523... 67 4e-12
04_01_0026 - 354855-354876,355184-355248,355710-355817,356215-35... 64 3e-11
11_03_0227 + 11934530-11934638,11937206-11937351,11937492-119376... 62 2e-10
03_01_0215 + 1696250-1696573,1697653-1697793,1698267-1698539,169... 61 3e-10
12_01_0813 + 7475591-7475693,7476972-7477117,7477205-7477324,747... 59 9e-10
02_05_0942 + 32970537-32970581,32971059-32971113,32971300-329714... 59 1e-09
04_04_1543 - 34270578-34270718,34271069-34271341,34271782-342719... 58 2e-09
08_01_0130 + 1040696-1041049,1042135-1042275,1042422-1042673,104... 48 2e-06
07_03_0057 + 12872946-12873152,12873371-12873421,12876335-128764... 30 0.63
07_01_0287 - 2094333-2094542,2094719-2095999 29 0.83
10_03_0021 + 7129786-7130117,7130227-7130347,7131048-7131136,713... 29 1.5
10_02_0085 - 5093036-5094285,5094737-5095255,5098698-5099373 28 1.9
01_02_0098 - 11087875-11089110,11091744-11092022 28 1.9
03_03_0015 - 13755971-13756957 28 2.5
03_02_0087 + 5553730-5553842,5555221-5555353,5555887-5556023,555... 27 3.4
07_01_1035 + 8998266-8998349,8999394-8999441,8999714-8999792,899... 27 4.4
07_01_1029 - 8902771-8902805,8903135-8903256,8904097-8904425,890... 27 4.4
01_06_1801 - 39954425-39954533,39955289-39955578,39955786-399568... 27 5.9
12_02_1017 + 25339515-25339548,25339689-25339837,25339932-253399... 26 7.7
07_03_1339 + 25879246-25881154,25881502-25881696,25881777-258819... 26 7.7
03_03_0003 + 13631664-13632641 26 7.7
>08_02_0034 -
11435678-11435702,11435787-11435816,11436364-11436501,
11436646-11436755,11436838-11436867,11437948-11437993,
11438453-11438622,11439156-11439221,11439299-11439378,
11440704-11440842,11440933-11441013,11441112-11441147,
11441414-11441539,11442084-11442179,11443615-11443689,
11444288-11444434,11445155-11445229,11445485-11445619,
11445706-11445834,11446161-11446292,11446395-11446598
Length = 689
Score = 85.4 bits (202), Expect = 1e-17
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Frame = +1
Query: 28 LKALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVP 207
LK +I GAPASGKGT IV+KY + H+S+GD LR ++ TE+GK+ K Y+D G LVP
Sbjct: 90 LKVMISGAPASGKGTQCRMIVEKYGLVHISTGDLLRAEVSSGTEIGKKAKEYMDNGMLVP 149
Query: 208 DDLMIKFMIKELK--EVNNKPWLLEWISR 288
D ++ ++ L +V + WLL+ R
Sbjct: 150 DQVVTDMVVSRLSQPDVRERGWLLDGYPR 178
>06_01_0067 +
561910-561987,562698-562759,564293-564338,564701-564758,
564892-565009,565130-565286,565611-565718,565884-565955,
566058-566174,566309-566404
Length = 303
Score = 80.2 bits (189), Expect = 4e-16
Identities = 35/95 (36%), Positives = 59/95 (62%)
Frame = +1
Query: 19 RKLLKALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGK 198
+K+ ++G P SGKGT ++IVK++ H+S+GD LR+ TE G +K ++EGK
Sbjct: 73 KKITIVFVIGGPGSGKGTQCAKIVKQFGFTHLSAGDLLREEAKYDTEQGTMIKNLMNEGK 132
Query: 199 LVPDDLMIKFMIKELKEVNNKPWLLEWISREQ*NK 303
LV DL++K + K ++E N +L++ R + N+
Sbjct: 133 LVSSDLIVKLLFKAMRESGNDKFLVDGFPRNEENR 167
>08_01_0066 -
455589-455687,455902-455976,456531-456677,457158-457292,
457380-457508,457719-457814,458212-458403
Length = 290
Score = 78.6 bits (185), Expect = 1e-15
Identities = 40/90 (44%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Frame = +1
Query: 28 LKALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVP 207
LK +I GAPASGKGT I KY + H+S+GD LR IA +E GK K ++++G+LVP
Sbjct: 74 LKVMIAGAPASGKGTQCELIKSKYGLVHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVP 133
Query: 208 DDLMIKFMIKE---LKEVNNKPWLLEWISR 288
D++++ M+KE + K WLL+ R
Sbjct: 134 DEIVVN-MVKERLLQPDAQEKGWLLDGYPR 162
>07_03_1324 -
25825153-25825197,25825705-25825785,25825907-25825967,
25826005-25826060,25826171-25826239,25826366-25826473,
25826555-25826635,25826795-25826951,25827060-25827177,
25827285-25827339,25827779-25827814
Length = 288
Score = 67.7 bits (158), Expect = 3e-12
Identities = 32/97 (32%), Positives = 55/97 (56%)
Frame = +1
Query: 13 GTRKLLKALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDE 192
G +K+ +LG P SGKGT + IV+ + H+S+GD LR I +E G ++ + E
Sbjct: 20 GDKKVTVVFVLGGPGSGKGTQCANIVEHFGFTHLSAGDLLRAEIKSGSENGTMIENMIKE 79
Query: 193 GKLVPDDLMIKFMIKELKEVNNKPWLLEWISREQ*NK 303
GK+VP ++ IK + + + N +L++ R + N+
Sbjct: 80 GKIVPSEVTIKLLQDAMIKNENDKFLIDGFPRNEENR 116
>06_01_0718 +
5233030-5233062,5233329-5233383,5233543-5233660,
5233746-5233902,5234033-5234113,5234213-5234320,
5234448-5234483
Length = 195
Score = 66.9 bits (156), Expect = 4e-12
Identities = 32/106 (30%), Positives = 59/106 (55%)
Frame = +1
Query: 13 GTRKLLKALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDE 192
G +K+ +LG P SGKGT S IV+ + H+S+G+ LR I +E G + + E
Sbjct: 19 GGKKVKIIFVLGGPGSGKGTQCSNIVEHFGFIHLSAGELLRAEINSGSENGTMIDTIITE 78
Query: 193 GKLVPDDLMIKFMIKELKEVNNKPWLLEWISREQ*NKLMLYGKFSL 330
GK+VP ++ IK + + + + N ++++ R + N+++ S+
Sbjct: 79 GKIVPSEITIKLLQEAIIKGGNDKYIIDGFPRNEENRVVFESVISI 124
>04_01_0026 -
354855-354876,355184-355248,355710-355817,356215-356295,
356729-356885,356990-357107,357485-357533,357806-357901
Length = 231
Score = 64.1 bits (149), Expect = 3e-11
Identities = 32/98 (32%), Positives = 54/98 (55%)
Frame = +1
Query: 13 GTRKLLKALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDE 192
G K A +LG P SGKGT RI + H+S+GD LR I+ E G+ + + E
Sbjct: 38 GATKPFIAFVLGGPGSGKGTQCVRIASDFGFAHLSAGDLLRSEISTGGEKGELILNIIKE 97
Query: 193 GKLVPDDLMIKFMIKELKEVNNKPWLLEWISREQ*NKL 306
GK+VP ++ ++ + K ++ + K L++ R + N++
Sbjct: 98 GKIVPSEITVELIRKAMESSDAKRVLIDGFPRCEENRI 135
>11_03_0227 +
11934530-11934638,11937206-11937351,11937492-11937611,
11937731-11937898,11938534-11938623,11938920-11939018
Length = 243
Score = 61.7 bits (143), Expect = 2e-10
Identities = 31/87 (35%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +1
Query: 31 KALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVPD 210
+ +++G P SGKGT S I +Y + H+++GD LR +A +T LG + K +D+G+LV D
Sbjct: 32 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMDKGELVSD 91
Query: 211 DLMIKFMIKELKEVN-NKPWLLEWISR 288
DL++ + + +K+ + K ++L+ R
Sbjct: 92 DLVVGIIDEAMKKPSCQKGFILDGFPR 118
>03_01_0215 +
1696250-1696573,1697653-1697793,1698267-1698539,
1698755-1698814,1698890-1699033
Length = 313
Score = 60.9 bits (141), Expect = 3e-10
Identities = 26/82 (31%), Positives = 49/82 (59%)
Frame = +1
Query: 4 QEFGTRKLLKALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAY 183
Q + ++ + LG P GKGT +SR+ + + H+++GD +RD +A L ++
Sbjct: 53 QRVAEERNVQWVFLGCPGVGKGTYASRLSRLLGVPHIATGDLVRDELASSGPLSVQLAEI 112
Query: 184 LDEGKLVPDDLMIKFMIKELKE 249
+++GKLV D+++I + K LK+
Sbjct: 113 VNQGKLVSDEIIINLLSKRLKK 134
>12_01_0813 +
7475591-7475693,7476972-7477117,7477205-7477324,
7477445-7477612,7478252-7478341,7478941-7479039
Length = 241
Score = 59.3 bits (137), Expect = 9e-10
Identities = 29/87 (33%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = +1
Query: 31 KALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVPD 210
+ +++G P GKGT S I ++ + H+++GD LR +A +T LG + K +D+G+LV D
Sbjct: 30 RVILVGPPGCGKGTQSPLIKDEFCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSD 89
Query: 211 DLMIKFMIKELKEVN-NKPWLLEWISR 288
DL++ + + +K+ + K ++L+ R
Sbjct: 90 DLVVGIIDEAMKKTSCQKGFILDGFPR 116
>02_05_0942 +
32970537-32970581,32971059-32971113,32971300-32971417,
32971567-32971615,32971637-32971723,32971890-32971970,
32972074-32972181,32972432-32972503,32973218-32973250
Length = 215
Score = 58.8 bits (136), Expect = 1e-09
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +1
Query: 13 GTRKLLKALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDE 192
G +K+ +LG P SGKGT + IV+ + H+S+GD LR I +E G ++ + E
Sbjct: 23 GDKKVTVVFVLGGPGSGKGTQCANIVEHFGFIHLSAGDLLRAEIKSGSENGTMIENMIKE 82
Query: 193 GKLVP-DDLMIK 225
GK+VP ++ MIK
Sbjct: 83 GKIVPSEEAMIK 94
>04_04_1543 -
34270578-34270718,34271069-34271341,34271782-34271922,
34272365-34272667
Length = 285
Score = 58.0 bits (134), Expect = 2e-09
Identities = 24/71 (33%), Positives = 44/71 (61%)
Frame = +1
Query: 37 LILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVPDDL 216
+ LG P GKGT +SR+ + + H+++GD +RD +A +++ ++ GKLV D++
Sbjct: 57 VFLGCPGVGKGTYASRLSQMLRVPHIATGDLVRDALASPGPFSEQLAEIVNNGKLVSDEI 116
Query: 217 MIKFMIKELKE 249
+I + K L+E
Sbjct: 117 IINLLSKRLEE 127
>08_01_0130 +
1040696-1041049,1042135-1042275,1042422-1042673,
1043797-1043904,1044289-1044593,1044720-1044841,
1044979-1045225,1045308-1045365,1045414-1045530,
1045718-1045753,1046492-1046554,1046958-1047047,
1047241-1047399,1047475-1047596,1048145-1048217,
1048307-1048375
Length = 771
Score = 48.4 bits (110), Expect = 2e-06
Identities = 21/75 (28%), Positives = 44/75 (58%)
Frame = +1
Query: 37 LILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVPDDL 216
+++G P K ++R+ + + ++S G +R ++ + L K++ ++EGKLVP+D+
Sbjct: 74 VVMGRPGPQKHAHAARLAEVLAVPYISMGTLVRQELSPASSLYKKIANSVNEGKLVPEDI 133
Query: 217 MIKFMIKELKEVNNK 261
+ + K L+E NK
Sbjct: 134 IFGLLTKRLEEGYNK 148
>07_03_0057 +
12872946-12873152,12873371-12873421,12876335-12876480,
12876567-12876756
Length = 197
Score = 29.9 bits (64), Expect = 0.63
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 37 LILGAPASGKGTISSRIVKKYNIEHVSSGDKLRD 138
L+ G P +GK T S + ++ H++ GD +R+
Sbjct: 16 LVTGTPGTGKTTTCSLLADAVDLRHINIGDLVRE 49
>07_01_0287 - 2094333-2094542,2094719-2095999
Length = 496
Score = 29.5 bits (63), Expect = 0.83
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +1
Query: 52 PASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVP 207
PA+G G + + + + + +H DH+A++ E +E + Y+D+G LVP
Sbjct: 119 PATGFGALPTSSMAEDSADHADD-----DHLAEEEE-EEEEEHYIDDGPLVP 164
>10_03_0021 +
7129786-7130117,7130227-7130347,7131048-7131136,
7131375-7131459,7131609-7131771,7132861-7132937,
7133016-7133160,7133236-7133537,7133615-7133720,
7134781-7134935,7135556-7135712,7135799-7135891,
7136232-7136359,7136439-7136696,7136855-7137145,
7137235-7137318,7138335-7138468,7138557-7138784,
7139778-7139958,7140021-7140108,7140268-7140434,
7140750-7141012,7141117-7141120
Length = 1216
Score = 28.7 bits (61), Expect = 1.5
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 37 LILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDE 192
L+LG PASGK T+ + K + + SG+ + +A + AY+ +
Sbjct: 184 LLLGPPASGKSTLLLALADKLDSQLKKSGEVAYNGMALDQFCVQRTSAYISQ 235
>10_02_0085 - 5093036-5094285,5094737-5095255,5098698-5099373
Length = 814
Score = 28.3 bits (60), Expect = 1.9
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -3
Query: 210 IRYKFSFVKVCFNLFAQF 157
I+Y SFV++ FN+F+QF
Sbjct: 293 IKYNSSFVEILFNMFSQF 310
>01_02_0098 - 11087875-11089110,11091744-11092022
Length = 504
Score = 28.3 bits (60), Expect = 1.9
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 124 DKLRDHIAKQTELGKEVKAY----LDEGKLVPDDL-MIKFMIKELKEVNNKPWLLEWISR 288
+K+ + K E G + + L E ++ +D+ + ++KEL+EVN+ PW L
Sbjct: 192 EKIPTTVVKMQESGIQPNKFSYFVLTESYIMMNDIESAEKVLKELQEVNSVPWSLYATLA 251
Query: 289 EQ*NKLMLYGK 321
NKL + K
Sbjct: 252 NGYNKLQQFDK 262
>03_03_0015 - 13755971-13756957
Length = 328
Score = 27.9 bits (59), Expect = 2.5
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +1
Query: 40 ILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDH 141
+LGA A+GK ++ R+ +++ E ++S DK++ H
Sbjct: 23 VLGATATGKSKLAIRLAARFDGEVINS-DKIQAH 55
>03_02_0087 +
5553730-5553842,5555221-5555353,5555887-5556023,
5556254-5556311,5556403-5556642
Length = 226
Score = 27.5 bits (58), Expect = 3.4
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -1
Query: 263 GLLLTSFNSFIMNLIIKSSGTSFPSSRYALTSLPSSVCFAMWSLSLSPLDTCSIL 99
GL L F + L + +S FPS + +++ +WS SL+ +D ++L
Sbjct: 9 GLRLAQFAFAAVALAVMASTNDFPSVTSFCFLVAAAILQCLWSFSLAIVDIYALL 63
>07_01_1035 +
8998266-8998349,8999394-8999441,8999714-8999792,
8999874-8999978,9000219-9000328,9000510-9000691,
9000909-9000978,9001066-9001239,9001373-9001477,
9001684-9001815,9002062-9002157,9002273-9002572
Length = 494
Score = 27.1 bits (57), Expect = 4.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 192 FVKVCFNLFAQFCLFCYVVPELISTRHMLNIVF 94
+VK C L A+ + +PE+I T N++F
Sbjct: 85 WVKTCLWLLAELAVIASDIPEVIGTGFAFNLLF 117
>07_01_1029 -
8902771-8902805,8903135-8903256,8904097-8904425,
8905435-8905530,8906126-8906257,8907244-8907348,
8907630-8907803,8908094-8908163,8908263-8908444,
8908669-8908778,8909778-8909882,8909965-8910043,
8910342-8910382,8910511-8910589,8910856-8910966
Length = 589
Score = 27.1 bits (57), Expect = 4.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 192 FVKVCFNLFAQFCLFCYVVPELISTRHMLNIVF 94
FVK+ L A+ + +PE+I T NI+F
Sbjct: 118 FVKIFLWLLAELAVIAADIPEVIGTAFAFNILF 150
>01_06_1801 -
39954425-39954533,39955289-39955578,39955786-39956838,
39956998-39957263,39957345-39957420,39957525-39957605,
39957676-39957831,39958565-39958669,39958761-39959367,
39959514-39959585,39959802-39959953,39960063-39960240,
39960642-39960745,39960822-39960953,39961036-39961132,
39961280-39961407,39961533-39961592,39962799-39962918,
39963011-39963091,39963173-39963361,39963826-39964024,
39964177-39964257,39964398-39964588,39965226-39965382,
39965986-39966119,39966266-39966334,39966434-39966481,
39966572-39966646,39967112-39967192,39967399-39967461,
39967564-39967623,39967754-39967795,39968777-39968902,
39969027-39969176
Length = 1843
Score = 26.6 bits (56), Expect = 5.9
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -3
Query: 198 FSFVKVCFNLFAQFCLFCYVVPELISTRHMLNIVFFHY 85
F V CF L+ +FC ++P L H I+ F +
Sbjct: 213 FDIVLECFELYPDNTIFCQLIP-LFPKSHAAQILGFKF 249
>12_02_1017 +
25339515-25339548,25339689-25339837,25339932-25339990,
25340665-25340742,25341155-25341347,25341424-25341454,
25341534-25341592,25341674-25341747,25342228-25342314,
25342353-25342379,25342522-25342583,25342676-25342704,
25343037-25343129
Length = 324
Score = 26.2 bits (55), Expect = 7.7
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 40 ILGAPASGKGTISSRIVKKYN 102
I G P +GK T++S +V++ N
Sbjct: 112 IAGPPGAGKSTVASEVVQRVN 132
>07_03_1339 +
25879246-25881154,25881502-25881696,25881777-25881928,
25882147-25882607,25883723-25883810,25884066-25884135,
25884288-25884361,25884456-25884524,25884647-25884724,
25884946-25885070,25885168-25885240,25885508-25885566,
25885650-25886027,25886134-25886236,25886332-25886544
Length = 1348
Score = 26.2 bits (55), Expect = 7.7
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 103 IEHVSSGDK-LRDHIAKQTELGKEVKAYLDEGKLVPDDLMIKFMIKEL 243
+EHVSSGD+ + + + + + K EGK +D+ ++ ++KE+
Sbjct: 559 VEHVSSGDESMEEDVMETKHVDSNTKPDYLEGK---NDVTLEHVVKEV 603
>03_03_0003 + 13631664-13632641
Length = 325
Score = 26.2 bits (55), Expect = 7.7
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 40 ILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDH 141
+LGA A+GK ++ I +++ E ++S DK++ H
Sbjct: 20 VLGATATGKSKLAISIAERFGGEVINS-DKIQVH 52
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,461,803
Number of Sequences: 37544
Number of extensions: 153845
Number of successful extensions: 502
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 502
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 554421256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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