Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0423
(359 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23651-13|AAA27957.3| 251|Caenorhabditis elegans Hypothetical p... 68 2e-12
Z50045-3|CAA90364.1| 210|Caenorhabditis elegans Hypothetical pr... 63 6e-11
AF304123-1|AAG50236.1| 210|Caenorhabditis elegans adenylate kin... 63 6e-11
Z48585-2|CAA88479.1| 222|Caenorhabditis elegans Hypothetical pr... 58 1e-09
Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical pr... 52 9e-08
Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical pr... 44 3e-05
Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical pr... 42 1e-04
AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical ... 42 1e-04
Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical pr... 31 0.24
AF016687-6|AAC48092.3| 309|Caenorhabditis elegans Serpentine re... 29 1.3
Z72512-4|CAA96666.1| 328|Caenorhabditis elegans Hypothetical pr... 28 1.7
Z83319-1|CAB05908.1| 322|Caenorhabditis elegans Hypothetical pr... 28 2.3
Z82086-2|CAB04995.2| 309|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z99281-23|CAE18026.1| 302|Caenorhabditis elegans Hypothetical p... 27 3.9
Z68342-6|CAD89740.1| 418|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z68342-5|CAA92774.2| 416|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 26 6.9
Z81510-3|CAB04163.1| 311|Caenorhabditis elegans Hypothetical pr... 26 6.9
Z67990-6|CAA91937.1| 199|Caenorhabditis elegans Hypothetical pr... 26 6.9
Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical pr... 26 6.9
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 26 6.9
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 26 6.9
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 26 6.9
Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical pr... 26 9.1
Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical pr... 26 9.1
U97196-5|AAB52458.3| 368|Caenorhabditis elegans G protein, alph... 26 9.1
U97196-4|AAP68962.2| 408|Caenorhabditis elegans G protein, alph... 26 9.1
U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical pr... 26 9.1
U23179-2|AAK68207.1| 345|Caenorhabditis elegans Serpentine rece... 26 9.1
AY008136-1|AAG32089.1| 368|Caenorhabditis elegans heterotrimeri... 26 9.1
AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeri... 26 9.1
AC024828-1|AAF60808.2| 419|Caenorhabditis elegans Hypothetical ... 26 9.1
>L23651-13|AAA27957.3| 251|Caenorhabditis elegans Hypothetical
protein C29E4.8 protein.
Length = 251
Score = 67.7 bits (158), Expect = 2e-12
Identities = 30/74 (40%), Positives = 51/74 (68%)
Frame = +1
Query: 28 LKALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVP 207
++A+ +G P SGKGT + +KY H+++GD LR +A +E GKE+KA +D GKLV
Sbjct: 27 IRAIFIGPPGSGKGTQAPAFAQKYFSCHLATGDLLRAEVASGSEFGKELKATMDAGKLVS 86
Query: 208 DDLMIKFMIKELKE 249
D+++ K + ++L++
Sbjct: 87 DEVVCKLIEQKLEK 100
>Z50045-3|CAA90364.1| 210|Caenorhabditis elegans Hypothetical
protein F38B2.4 protein.
Length = 210
Score = 62.9 bits (146), Expect = 6e-11
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Frame = +1
Query: 40 ILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVP---- 207
I+G P SGKGT +IV KY + H+SSGD LRD + + G ++ A ++ G LVP
Sbjct: 25 IVGGPGSGKGTQCDKIVAKYGLTHLSSGDLLRDEVKSGSPRGAQLTAIMESGALVPLEVV 84
Query: 208 DDLMIKFMIKELKEVNNKPWLLEWISRE 291
DL+ + M+K + E +K +L++ RE
Sbjct: 85 LDLVKEAMLKAI-EKGSKGFLIDGYPRE 111
>AF304123-1|AAG50236.1| 210|Caenorhabditis elegans adenylate kinase
1 protein.
Length = 210
Score = 62.9 bits (146), Expect = 6e-11
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Frame = +1
Query: 40 ILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVP---- 207
I+G P SGKGT +IV KY + H+SSGD LRD + + G ++ A ++ G LVP
Sbjct: 25 IVGGPGSGKGTQCDKIVAKYGLTHLSSGDLLRDEVKSGSPRGAQLTAIMESGALVPLEVV 84
Query: 208 DDLMIKFMIKELKEVNNKPWLLEWISRE 291
DL+ + M+K + E +K +L++ RE
Sbjct: 85 LDLVKEAMLKAI-EKGSKGFLIDGYPRE 111
>Z48585-2|CAA88479.1| 222|Caenorhabditis elegans Hypothetical
protein ZK673.2 protein.
Length = 222
Score = 58.4 bits (135), Expect = 1e-09
Identities = 26/76 (34%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Frame = +1
Query: 25 LLKALILGAPASGKGTISSRIVKKYN---IEHVSSGDKLRDHIAKQTELGKEVKAYLDEG 195
+ + L+ GA SGKGTI+ +V+++ + ++GD +RDHIA+ TE G +++L++G
Sbjct: 1 MYRVLLSGAAGSGKGTIARMLVREFEPLGFNYFAAGDFIRDHIARGTEFGVRAQSFLNKG 60
Query: 196 KLVPDDLMIKFMIKEL 243
+ VPD ++ ++ E+
Sbjct: 61 EHVPDSILNGAILAEM 76
>Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical
protein F40F8.1 protein.
Length = 191
Score = 52.4 bits (120), Expect = 9e-08
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Frame = +1
Query: 40 ILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQ-TELGKEVKAYLDEGKLVPDDL 216
+LG P SGKGTI ++I + N H+S+GD LR ++ +E G +++++ G +VP ++
Sbjct: 7 VLGPPGSGKGTICAKIQENLNYVHLSAGDLLRAERQREGSEFGALIESHIKNGSIVPVEI 66
Query: 217 MIKFMIKELKEVNN-KPWLLEWISREQ*N 300
+ +K + K +L++ R + N
Sbjct: 67 TCSLLENAMKACGDAKGFLVDGFPRNEDN 95
>Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical
protein C29F7.3 protein.
Length = 191
Score = 44.0 bits (99), Expect = 3e-05
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +1
Query: 40 ILGAPASGKGTISSRIVKKYNIEHVSSGDKLR-DHIAKQTELGKEVKAYLDEGKLVPDDL 216
+LG P SGKGTI ++I + H+S+GD LR + +E G ++ ++ G +VP ++
Sbjct: 7 VLGPPGSGKGTICTQIHENLGYVHLSAGDLLRAERERAGSEYGALIEGHIKNGSIVPVEI 66
>Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 42.3 bits (95), Expect = 1e-04
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = +1
Query: 37 LILGAPASGKGTISSRIVKKYN-IEHVSSGDKLRDHI--AKQTELGKEVKAYLDEGKLVP 207
L+LGAP S K IS RI +KY+ +S GD LR I K E+ +V ++ G +P
Sbjct: 517 LVLGAPGSQKNDISRRIAQKYDGFTMLSMGDILRKKINNEKNDEMWDKVSKKMNNGDPIP 576
Query: 208 DDLMIKFMIKELKEVNNKPW 267
+ + +EL W
Sbjct: 577 TKMCRTVLYEELHSRGTSNW 596
>AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 42.3 bits (95), Expect = 1e-04
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = +1
Query: 37 LILGAPASGKGTISSRIVKKYN-IEHVSSGDKLRDHI--AKQTELGKEVKAYLDEGKLVP 207
L+LGAP S K IS RI +KY+ +S GD LR I K E+ +V ++ G +P
Sbjct: 517 LVLGAPGSQKNDISRRIAQKYDGFTMLSMGDILRKKINNEKNDEMWDKVSKKMNNGDPIP 576
Query: 208 DDLMIKFMIKELKEVNNKPW 267
+ + +EL W
Sbjct: 577 TKMCRTVLYEELHSRGTSNW 596
>Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical
protein E02H1.6 protein.
Length = 182
Score = 31.1 bits (67), Expect = 0.24
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 16 TRKLLKALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAY-LDE 192
TR+ L+ G+P +GK T+ ++ +K + ++R++ Q + ++ + LDE
Sbjct: 6 TRRRPNILVTGSPGTGKSTLGQQVAEKLGFVFIEVSKEVREN-NLQGDFDEQYNCHVLDE 64
Query: 193 GKLV 204
KL+
Sbjct: 65 DKLL 68
>AF016687-6|AAC48092.3| 309|Caenorhabditis elegans Serpentine
receptor, class h protein282 protein.
Length = 309
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 210 IRYKFSFVKVCFNLFAQFCLFCYVVPELISTR-HMLNIVFFHYTRRYSSFSGC 55
I+Y + + + LF +C+ P + ST+ H+LN F ++ Y C
Sbjct: 15 IQYSIAVISLPVQLFGVYCIIAKTPPTMCSTKLHLLN--FLMWSMAYDMIMTC 65
>Z72512-4|CAA96666.1| 328|Caenorhabditis elegans Hypothetical
protein R07B5.6 protein.
Length = 328
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 203 TSFPSSRYALTSLPSSVCFAMWSLSLSPLDTCSILYFFT 87
T F S + SLP++ WS S+ P ++++FFT
Sbjct: 74 TLFFLSDFLRFSLPATGILTSWSASIQPNHFLNLIFFFT 112
>Z83319-1|CAB05908.1| 322|Caenorhabditis elegans Hypothetical
protein T02D1.3 protein.
Length = 322
Score = 27.9 bits (59), Expect = 2.3
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -1
Query: 287 REIHSKSHGLLLTSFNSFIMNLIIKSSGTSF--PSSRYALTSLPSSVCFAMWSLSLSPLD 114
R + +K H L+ N + +I+ S T+F + Y + PS+ W S P
Sbjct: 53 RRLLTKKHDLM----NPHVFLVIVLSQVTNFGYTLADYFVIRAPSTGIMTSWCASQKPNH 108
Query: 113 TCSILYFFTI 84
I++FF+I
Sbjct: 109 FLKIIFFFSI 118
>Z82086-2|CAB04995.2| 309|Caenorhabditis elegans Hypothetical
protein ZK228.3 protein.
Length = 309
Score = 27.5 bits (58), Expect = 3.0
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 311 SISLFYCSREIHSKSHGL 258
SI L+YC E K HGL
Sbjct: 77 SIGLYYCKEEYRGKGHGL 94
>Z99281-23|CAE18026.1| 302|Caenorhabditis elegans Hypothetical
protein Y57G11C.43 protein.
Length = 302
Score = 27.1 bits (57), Expect = 3.9
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 37 LILGAPASGKGTISSRIVKKY 99
++ G P+SGK T+ R+ KK+
Sbjct: 5 IVTGHPSSGKSTVVDRLAKKF 25
>Z68342-6|CAD89740.1| 418|Caenorhabditis elegans Hypothetical
protein F38E11.6b protein.
Length = 418
Score = 26.6 bits (56), Expect = 5.2
Identities = 17/84 (20%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +1
Query: 40 ILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHI-AKQTELGKEVK----AYLDEGKLV 204
I G PAS KG+I + +N +S D + + ++ + G ++K A ++ ++
Sbjct: 47 IFGGPASQKGSIIEELTSSFNFTSISVEDIVFQYFPSRLSGSGTQIKDIQDALRNDEGML 106
Query: 205 PDDLMIKFMIKELKEVNNKPWLLE 276
D +++ + +K N+ ++++
Sbjct: 107 SIDWVLEMISSRIKMTMNQRFVVD 130
>Z68342-5|CAA92774.2| 416|Caenorhabditis elegans Hypothetical
protein F38E11.6a protein.
Length = 416
Score = 26.6 bits (56), Expect = 5.2
Identities = 17/84 (20%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +1
Query: 40 ILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHI-AKQTELGKEVK----AYLDEGKLV 204
I G PAS KG+I + +N +S D + + ++ + G ++K A ++ ++
Sbjct: 47 IFGGPASQKGSIIEELTSSFNFTSISVEDIVFQYFPSRLSGSGTQIKDIQDALRNDEGML 106
Query: 205 PDDLMIKFMIKELKEVNNKPWLLE 276
D +++ + +K N+ ++++
Sbjct: 107 SIDWVLEMISSRIKMTMNQRFVVD 130
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 26.2 bits (55), Expect = 6.9
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 144 YVVPELISTRHMLNIVFFHYTRR 76
YV PE IS LN VFF RR
Sbjct: 344 YVTPEKISASGRLNSVFFDLHRR 366
>Z81510-3|CAB04163.1| 311|Caenorhabditis elegans Hypothetical
protein F21D9.4 protein.
Length = 311
Score = 26.2 bits (55), Expect = 6.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 311 SISLFYCSREIHSKSHGL 258
SI L+YC E K HG+
Sbjct: 77 SIGLYYCREEYRGKGHGI 94
>Z67990-6|CAA91937.1| 199|Caenorhabditis elegans Hypothetical
protein F02D10.6 protein.
Length = 199
Score = 26.2 bits (55), Expect = 6.9
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = -3
Query: 249 FLQFLYHEFNH*IIRYKFSFVKVCFNLFAQFCLFCYVVPELISTRHMLNIVFFHYTRRY 73
FL N I R F + +C+N++ + L +VP IS + + Y Y
Sbjct: 59 FLSVFCKTLNFAIYRAGFRLLHMCYNVYILYTLGYMIVPFHISLYFLFEFTYTVYGISY 117
>Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical
protein T16G12.1 protein.
Length = 1890
Score = 26.2 bits (55), Expect = 6.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 267 PWFVVDFLQFLYHEFNH*IIRY 202
P V DF+Q H+ NH +IRY
Sbjct: 532 PLNVTDFMQPYIHQTNHPLIRY 553
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 26.2 bits (55), Expect = 6.9
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 144 YVVPELISTRHMLNIVFFHYTRR 76
YV PE IS LN VFF RR
Sbjct: 344 YVTPEKISASGRLNSVFFDLHRR 366
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 26.2 bits (55), Expect = 6.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 151 QTELGKEVKAYLDEGKLVPDDLMI 222
Q E+G+ +K LDEGK+ ++L I
Sbjct: 52 QKEVGEALKEILDEGKVKREELFI 75
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 26.2 bits (55), Expect = 6.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 151 QTELGKEVKAYLDEGKLVPDDLMI 222
Q E+G+ +K LDEGK+ ++L I
Sbjct: 52 QKEVGEALKEILDEGKVKREELFI 75
>Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical
protein B0365.1 protein.
Length = 1099
Score = 25.8 bits (54), Expect = 9.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 76 SSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLV 204
S+ IV + HV +GDK D AK L ++ K + +L+
Sbjct: 21 STGIVSAPHAFHVKAGDKFSDVAAKYEWLAQDNKGVIKPDQLI 63
>Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical
protein F56H9.3 protein.
Length = 364
Score = 25.8 bits (54), Expect = 9.1
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 22 KLLKALILGAPASGKGTISSRIVKKYNIEHVSSGDKL-RDH 141
K+LK LILG SGK T +I K + E S+ +K+ R H
Sbjct: 38 KILKLLILGPGESGKSTTIKQI-KIIHDEGYSAEEKMVRKH 77
>U97196-5|AAB52458.3| 368|Caenorhabditis elegans G protein, alpha
subunit protein14, isoform a protein.
Length = 368
Score = 25.8 bits (54), Expect = 9.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 28 LKALILGAPASGKGTI 75
+K LILG P SGK TI
Sbjct: 33 IKILILGGPLSGKSTI 48
>U97196-4|AAP68962.2| 408|Caenorhabditis elegans G protein, alpha
subunit protein14, isoform b protein.
Length = 408
Score = 25.8 bits (54), Expect = 9.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 28 LKALILGAPASGKGTI 75
+K LILG P SGK TI
Sbjct: 73 IKILILGGPLSGKSTI 88
>U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical
protein F27C1.6 protein.
Length = 647
Score = 25.8 bits (54), Expect = 9.1
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +1
Query: 82 RIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDE 192
RI+++ +++H K + + K EVK LDE
Sbjct: 245 RIMERGSLKHRGQNQKFKQMLEKHASRNPEVKKLLDE 281
>U23179-2|AAK68207.1| 345|Caenorhabditis elegans Serpentine
receptor, class b (beta)protein 5 protein.
Length = 345
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 140 WSLSLSPLDTCSILYFFTIRDDIVPF 63
W+LS+S L S+LYF R ++PF
Sbjct: 27 WTLSVSLLAVPSLLYFLLKRVLLLPF 52
>AY008136-1|AAG32089.1| 368|Caenorhabditis elegans heterotrimeric
G protein alphasubunit protein.
Length = 368
Score = 25.8 bits (54), Expect = 9.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 28 LKALILGAPASGKGTI 75
+K LILG P SGK TI
Sbjct: 33 IKILILGGPLSGKSTI 48
>AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 25.8 bits (54), Expect = 9.1
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 22 KLLKALILGAPASGKGTISSRIVKKYNIEHVSSGDKL-RDH 141
K+LK LILG SGK T +I K + E S+ +K+ R H
Sbjct: 38 KILKLLILGPGESGKSTTIKQI-KIIHDEGYSAEEKMVRKH 77
>AC024828-1|AAF60808.2| 419|Caenorhabditis elegans Hypothetical
protein Y55F3BL.1 protein.
Length = 419
Score = 25.8 bits (54), Expect = 9.1
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 146 AMWSLSLSPLDTCSILYFFTIRDDIVPFPDAGAPKINAFSSFLVPNSC 3
A W LS + I F + I FP P NAFSS ++ +SC
Sbjct: 370 ANWELSKNREKMPKITEFCE-KSIITAFPAIYEPNSNAFSSTVIMSSC 416
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,415,643
Number of Sequences: 27780
Number of extensions: 142807
Number of successful extensions: 580
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 492763868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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