Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0423
(359 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g35170.1 68418.m04168 adenylate kinase family protein contain... 77 3e-15
At5g47840.1 68418.m05911 adenylate kinase, chloroplast, putative... 77 4e-15
At4g25280.1 68417.m03636 adenylate kinase family protein contain... 76 8e-15
At3g60180.2 68416.m06721 uridylate kinase, putative / uridine mo... 73 8e-14
At3g60180.1 68416.m06720 uridylate kinase, putative / uridine mo... 73 8e-14
At5g26667.2 68418.m03158 uridylate kinase / uridine monophosphat... 70 5e-13
At5g26667.1 68418.m03157 uridylate kinase / uridine monophosphat... 70 5e-13
At5g63400.1 68418.m07958 adenylate kinase identical to adenylate... 60 6e-10
At2g39270.1 68415.m04822 adenylate kinase family protein contain... 60 6e-10
At5g50370.1 68418.m06238 adenylate kinase, putative similar to a... 59 8e-10
At2g37250.1 68415.m04570 adenylate kinase family protein contain... 56 7e-09
At3g01820.1 68416.m00124 adenylate kinase family protein contain... 48 2e-06
At5g60340.1 68418.m07564 maoC-like dehydratase domain-containing... 30 0.40
At2g15490.1 68415.m01772 UDP-glucoronosyl/UDP-glucosyl transfera... 30 0.40
At2g15490.2 68415.m01773 UDP-glucoronosyl/UDP-glucosyl transfera... 29 0.70
At2g33300.1 68415.m04081 hypothetical protein 29 1.2
At4g12610.1 68417.m01987 transcription initiation factor IIF alp... 28 2.1
At4g09720.1 68417.m01596 Ras-related GTP-binding protein, putati... 28 2.1
At3g26740.1 68416.m03343 light responsive protein-related simila... 28 2.1
At3g15340.1 68416.m01936 expressed protein 28 2.1
At5g45140.1 68418.m05542 DNA-directed RNA polymerase, putative s... 27 3.8
At5g40450.1 68418.m04905 expressed protein 27 3.8
At2g26310.1 68415.m03157 expressed protein 27 3.8
At1g79490.1 68414.m09264 pentatricopeptide (PPR) repeat-containi... 27 3.8
At3g02490.1 68416.m00237 pentatricopeptide (PPR) repeat-containi... 27 5.0
At2g15480.1 68415.m01771 UDP-glucoronosyl/UDP-glucosyl transfera... 27 5.0
At4g39400.1 68417.m05577 brassinosteroid insensitive 1 (BRI1) id... 26 6.6
At4g18480.1 68417.m02741 magnesium-chelatase subunit chlI, chlor... 26 8.7
At4g14820.1 68417.m02279 pentatricopeptide (PPR) repeat-containi... 26 8.7
At4g10220.1 68417.m01676 hypothetical protein IB1C3-1 protein, A... 26 8.7
At3g63110.1 68416.m07088 adenylate isopentenyltransferase 3 / cy... 26 8.7
At3g53510.1 68416.m05908 ABC transporter family protein breast c... 26 8.7
At1g59870.1 68414.m06745 ABC transporter family protein similar ... 26 8.7
At1g19525.1 68414.m02432 pentatricopeptide (PPR) repeat-containi... 26 8.7
>At5g35170.1 68418.m04168 adenylate kinase family protein contains
Pfam profile: PF00406 adenylate kinase
Length = 588
Score = 77.4 bits (182), Expect = 3e-15
Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Frame = +1
Query: 28 LKALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVP 207
LK +I GAPASGKGT IV K+ + H+S+GD LR ++ T++GK K +++ G LVP
Sbjct: 80 LKVMISGAPASGKGTQCELIVHKFGLVHISTGDLLRAEVSSGTDIGKRAKEFMNSGSLVP 139
Query: 208 DDLMIKFMIKELKEVNNKP--WLLEWISR 288
D+++I + L + K WLL+ R
Sbjct: 140 DEIVIAMVAGRLSREDAKEHGWLLDGFPR 168
>At5g47840.1 68418.m05911 adenylate kinase, chloroplast, putative /
ATP-AMP transphosphorylase, putative similar to
SP|P43188 Adenylate kinase, chloroplast (EC 2.7.4.3)
(ATP-AMP transphosphorylase) {Zea mays}; contains Pfam
profile PF00406: Adenylate kinase
Length = 283
Score = 77.0 bits (181), Expect = 4e-15
Identities = 37/89 (41%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Frame = +1
Query: 28 LKALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVP 207
LK +I GAPASGKGT I KY + H+S+GD LR IA +E G+ K ++++G+LVP
Sbjct: 65 LKIMISGAPASGKGTQCELITHKYGLVHISAGDLLRAEIASGSENGRRAKEHMEKGQLVP 124
Query: 208 DDLMIKFMIKELKEVNN--KPWLLEWISR 288
D++++ + L + ++ K WLL+ R
Sbjct: 125 DEIVVMMVKDRLSQTDSEQKGWLLDGYPR 153
>At4g25280.1 68417.m03636 adenylate kinase family protein contains
Pfam profile: PF00406 adenylate kinase
Length = 249
Score = 75.8 bits (178), Expect = 8e-15
Identities = 33/89 (37%), Positives = 58/89 (65%)
Frame = +1
Query: 40 ILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVPDDLM 219
+LG P SGKGT +IV+ + ++H+S+GD LR IA TE G + + +GK+VP ++
Sbjct: 48 VLGGPGSGKGTQCEKIVETFGLQHLSAGDLLRREIAMHTENGAMILNLIKDGKIVPSEVT 107
Query: 220 IKFMIKELKEVNNKPWLLEWISREQ*NKL 306
+K + KEL+ +N+ +L++ R + N++
Sbjct: 108 VKLIQKELESSDNRKFLIDGFPRTEENRV 136
>At3g60180.2 68416.m06721 uridylate kinase, putative / uridine
monophosphate kinase, putative / UMP kinase, putative
similar to uridylate kinase (EC 2.7.4.-) (UK) (Uridine
monophosphate kinase) (UMP kinase) (UMP/CMP kinase)
(Swiss-Prot:O04905) [Arabidopsis thaliana]
Length = 204
Score = 72.5 bits (170), Expect = 8e-14
Identities = 31/95 (32%), Positives = 56/95 (58%)
Frame = +1
Query: 19 RKLLKALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGK 198
+K +LG P SGKGT + +VK ++ H S+GD LR I +E G +++ + EG+
Sbjct: 19 KKSTVVFVLGGPGSGKGTQCANVVKHFSYTHFSAGDLLRAEIKSGSEFGAMIQSMIAEGR 78
Query: 199 LVPDDLMIKFMIKELKEVNNKPWLLEWISREQ*NK 303
+VP ++ +K + K ++E N +L++ R + N+
Sbjct: 79 IVPSEITVKLLCKAMEESGNDKFLIDGFPRNEENR 113
>At3g60180.1 68416.m06720 uridylate kinase, putative / uridine
monophosphate kinase, putative / UMP kinase, putative
similar to uridylate kinase (EC 2.7.4.-) (UK) (Uridine
monophosphate kinase) (UMP kinase) (UMP/CMP kinase)
(Swiss-Prot:O04905) [Arabidopsis thaliana]
Length = 204
Score = 72.5 bits (170), Expect = 8e-14
Identities = 31/95 (32%), Positives = 56/95 (58%)
Frame = +1
Query: 19 RKLLKALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGK 198
+K +LG P SGKGT + +VK ++ H S+GD LR I +E G +++ + EG+
Sbjct: 19 KKSTVVFVLGGPGSGKGTQCANVVKHFSYTHFSAGDLLRAEIKSGSEFGAMIQSMIAEGR 78
Query: 199 LVPDDLMIKFMIKELKEVNNKPWLLEWISREQ*NK 303
+VP ++ +K + K ++E N +L++ R + N+
Sbjct: 79 IVPSEITVKLLCKAMEESGNDKFLIDGFPRNEENR 113
>At5g26667.2 68418.m03158 uridylate kinase / uridine monophosphate
kinase / UMP kinase (PYR6) identical to uridylate kinase
/ UMP/CMP kinase SP:O04905 from [Arabidopsis thaliana]
Length = 202
Score = 69.7 bits (163), Expect = 5e-13
Identities = 33/88 (37%), Positives = 53/88 (60%)
Frame = +1
Query: 40 ILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVPDDLM 219
+LG P SGKGT + IV+ Y H+S+GD LR I +E G ++ + EGK+VP ++
Sbjct: 19 VLGGPGSGKGTQCAYIVEHYGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVT 78
Query: 220 IKFMIKELKEVNNKPWLLEWISREQ*NK 303
IK + K ++E N +L++ R + N+
Sbjct: 79 IKLLQKAIQENGNDKFLIDGFPRNEENR 106
>At5g26667.1 68418.m03157 uridylate kinase / uridine monophosphate
kinase / UMP kinase (PYR6) identical to uridylate kinase
/ UMP/CMP kinase SP:O04905 from [Arabidopsis thaliana]
Length = 208
Score = 69.7 bits (163), Expect = 5e-13
Identities = 33/88 (37%), Positives = 53/88 (60%)
Frame = +1
Query: 40 ILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVPDDLM 219
+LG P SGKGT + IV+ Y H+S+GD LR I +E G ++ + EGK+VP ++
Sbjct: 19 VLGGPGSGKGTQCAYIVEHYGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVT 78
Query: 220 IKFMIKELKEVNNKPWLLEWISREQ*NK 303
IK + K ++E N +L++ R + N+
Sbjct: 79 IKLLQKAIQENGNDKFLIDGFPRNEENR 106
>At5g63400.1 68418.m07958 adenylate kinase identical to adenylate
kinase (ATP-AMP transphosphorylase) [Arabidopsis
thaliana] SWISS-PROT:O82514
Length = 246
Score = 59.7 bits (138), Expect = 6e-10
Identities = 30/78 (38%), Positives = 48/78 (61%)
Frame = +1
Query: 31 KALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVPD 210
+ + +G P SGKGT S + +Y + H+S+GD LR +A +T LG + K +++G+LV D
Sbjct: 35 RLIFIGPPGSGKGTQSPVVKDEYCLCHLSTGDMLRAAVASKTPLGVKAKEAMEKGELVSD 94
Query: 211 DLMIKFMIKELKEVNNKP 264
DL++ + E NKP
Sbjct: 95 DLVVGI----IDEAMNKP 108
>At2g39270.1 68415.m04822 adenylate kinase family protein contains
Pfam profile: PF00406: adenylate kinase
Length = 295
Score = 59.7 bits (138), Expect = 6e-10
Identities = 25/75 (33%), Positives = 45/75 (60%)
Frame = +1
Query: 37 LILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVPDDL 216
+ LG P GKGT +SR+ + H+++GD +R+ ++ L ++K ++ GKLVPD+
Sbjct: 68 VFLGCPGVGKGTYASRLSSLLGVPHIATGDLVREELSSSGLLSSQLKELVNHGKLVPDEF 127
Query: 217 MIKFMIKELKEVNNK 261
+I + K L+ +K
Sbjct: 128 IISLLSKRLQAGKDK 142
>At5g50370.1 68418.m06238 adenylate kinase, putative similar to
adenylate kinase (ATP-AMP transphosphorylase)
[Arabidopsis thaliana] SWISS-PROT:O82514
Length = 248
Score = 59.3 bits (137), Expect = 8e-10
Identities = 28/67 (41%), Positives = 44/67 (65%)
Frame = +1
Query: 31 KALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVPD 210
+ + +G P SGKGT S I ++ + H+S+GD LR +A +T LG + K +D+G+LV D
Sbjct: 36 RLVFIGPPGSGKGTQSPVIKDEFCLCHLSTGDMLRAAVAAKTPLGVKAKEAMDKGELVSD 95
Query: 211 DLMIKFM 231
DL++ M
Sbjct: 96 DLVVGIM 102
>At2g37250.1 68415.m04570 adenylate kinase family protein contains
Pfam profile: PF00406 adenylate kinase
Length = 284
Score = 56.0 bits (129), Expect = 7e-09
Identities = 22/70 (31%), Positives = 44/70 (62%)
Frame = +1
Query: 37 LILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVPDDL 216
+ LG P GKGT +SR+ + H+++GD +R+ +A L +++ +++GKLV D++
Sbjct: 55 VFLGCPGVGKGTYASRLSTLLGVPHIATGDLVREELASSGPLSQKLSEIVNQGKLVSDEI 114
Query: 217 MIKFMIKELK 246
++ + K L+
Sbjct: 115 IVDLLSKRLE 124
>At3g01820.1 68416.m00124 adenylate kinase family protein contains
Pfam profile: PF00406 adenylate kinase
Length = 263
Score = 47.6 bits (108), Expect = 2e-06
Identities = 20/71 (28%), Positives = 41/71 (57%)
Frame = +1
Query: 37 LILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVPDDL 216
+++GAP + + + R+ K + H+S G +R + ++ L KE+ + ++E KLVP +
Sbjct: 66 VLMGAPGAWRHVFAERLSKLLEVPHISMGSLVRQELNPRSSLYKEIASAVNERKLVPKSV 125
Query: 217 MIKFMIKELKE 249
+ + K L+E
Sbjct: 126 VFALLSKRLEE 136
>At5g60340.1 68418.m07564 maoC-like dehydratase domain-containing
protein contains similarity to (R)-specific enoyl-CoA
hydratase PhaJ1 [Pseudomonas oleovorans]
gi|22506675|gb|AAM97601; contains Pfam domain PF01575:
MaoC like domain
Length = 337
Score = 30.3 bits (65), Expect = 0.40
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 37 LILGAPASGKGTISSRIVKKYNIEHVSSGDKLRD 138
LI G P +GK T +S + + N+ ++ GD +++
Sbjct: 17 LITGTPGTGKSTTASALAEATNLRYICIGDLVKE 50
>At2g15490.1 68415.m01772 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 484
Score = 30.3 bits (65), Expect = 0.40
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Frame = +1
Query: 4 QEFGTRKLL-KALILGAPASG-----KGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELG 165
++F KLL K L +G KG + SR + + V G+K + + ELG
Sbjct: 397 EQFYNEKLLTKVLRIGVNVGATELVKKGKLISRAQVEKAVREVIGGEKAEERRLRAKELG 456
Query: 166 KEVKAYLDEGKLVPDDLMIKFM 231
+ KA ++EG +D+ KFM
Sbjct: 457 EMAKAAVEEGGSSYNDVN-KFM 477
>At2g15490.2 68415.m01773 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 270
Score = 29.5 bits (63), Expect = 0.70
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 64 KGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVPDDLMIKFM 231
KG + SR + + V G+K + + ELG+ KA ++EG +D+ KFM
Sbjct: 209 KGKLISRAQVEKAVREVIGGEKAEERRLRAKELGEMAKAAVEEGGSSYNDVN-KFM 263
>At2g33300.1 68415.m04081 hypothetical protein
Length = 265
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 88 VKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVPDDLMIK 225
+KK N+ V SG K R+H + EVK +DE VP+ + +K
Sbjct: 23 LKKNNVVKVCSGLKKREHQSSHAHETGEVK-QIDEQNHVPEKVSMK 67
>At4g12610.1 68417.m01987 transcription initiation factor IIF alpha
subunit (TFIIF-alpha) family protein low similarity to
SP|Q05913 Transcription initiation factor IIF, alpha
subunit (TFIIF-alpha) (Transcription factor 5, large
chain) (TF5A) {Drosophila melanogaster}; contains Pfam
profile PF05793: Transcription initiation factor IIF,
alpha subunit (TFIIF-alpha)
Length = 543
Score = 27.9 bits (59), Expect = 2.1
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 67 GTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVPD-DLMIKFMIKEL 243
GT+ +R++++YN+ + DK T L K ++ L D +F +
Sbjct: 49 GTVVTRLIREYNVRAAAPTDKNYFIGRFVTGLPNFKKGSENKWSLRKDIPQGRQFTDAQR 108
Query: 244 KEVNNKPWLLE 276
+++ NKPW+LE
Sbjct: 109 EKLKNKPWILE 119
>At4g09720.1 68417.m01596 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB7A from [Lotus
japonicus]
Length = 206
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/53 (26%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +1
Query: 19 RKLLKALILGAPASGKGTISSRIV-KKYNIEHVSSGDKLRDHIAKQTELGKEV 174
R LLK ++LG GK ++ ++ V KK+++++ ++ D + K+ ++G+++
Sbjct: 6 RTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIG--ADFVTKELQIGEKL 56
>At3g26740.1 68416.m03343 light responsive protein-related similar
to light regulated protein precursor SP:Q03200 [Oryza
sativa] (Plant Mol. Biol. 22 (1), 165-170 (1993)), ccr
protein GB:S52663 [Citrus X paradisi] (Plant Mol. Biol.
26 (1), 165-173 (1994))
Length = 141
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -1
Query: 191 SSRYALTSLPSSVCFAMWSLSLSPLDTCSILYFFTIRDDIVP 66
SS +LTS P++V + LS+ P + C ++ + DI P
Sbjct: 46 SSSSSLTSDPNTVDYNSSILSVFPAEACEVISGYACSADIYP 87
>At3g15340.1 68416.m01936 expressed protein
Length = 487
Score = 27.9 bits (59), Expect = 2.1
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +1
Query: 88 VKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLVPDDLMI---KFMIKELKEVNN 258
+ Y IEH S G + D + K+TE K L E L + I K M EL EV
Sbjct: 173 IAHYQIEHGSIGFEEEDWVLKETE--KADGIVLSEDSLAEKEASINRVKSMAVELNEVKK 230
Query: 259 KPWLLEW 279
+ + W
Sbjct: 231 ELDAITW 237
>At5g45140.1 68418.m05542 DNA-directed RNA polymerase, putative
similar to SP|P22276 DNA-directed RNA polymerase III 130
kDa polypeptide (EC 2.7.7.6) (RNA polymerase III subunit
2) {Saccharomyces cerevisiae}; contains Pfam profiles
PF04560: RNA polymerase Rpb2 domain 7, PF04561: RNA
polymerase Rpb2 domain 2, PF04565: RNA polymerase Rpb2
domain 3, PF04566: RNA polymerase Rpb2 domain 4,
PF04567: RNA polymerase Rpb2 domain 5
Length = 1150
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +1
Query: 136 DHIAKQTELGKEVKAYLDEGKLVPDDLMIKFMIKE 240
DH + +L +K+ D+ +LVP+ L ++ ++K+
Sbjct: 14 DHFIDKEKLSAPIKSTADKFQLVPEFLKVRGLVKQ 48
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 118 SGDKLRDHIAKQTELGKEVKAYLDEGKLVPDDLMIKFMIKELKEVNNK 261
SGDK + + ++ + + LD+ K+V DD +++E + +N K
Sbjct: 71 SGDKETEELKRENGEATKTISVLDDSKIVKDD-QESIVVREPQSLNEK 117
>At2g26310.1 68415.m03157 expressed protein
Length = 398
Score = 27.1 bits (57), Expect = 3.8
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = -1
Query: 287 REIHSKSHGLLLTSFNSFIMNLIIKSSGTSFPSSRYALTSLPSSVCFAMW----SLSLSP 120
+E S+S+ +L + S M +I S + Y PSSVC + S+ S
Sbjct: 205 KENASRSNSEVLVATGSRTMKIIRIKSLKVYAFGFYVH---PSSVCQKLGRKYASVPASK 261
Query: 119 LDTCSILYFFTIRDDIV 69
LD C LY +R+DIV
Sbjct: 262 LDKCDDLYKDLLREDIV 278
>At1g79490.1 68414.m09264 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 836
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = +1
Query: 142 IAKQTELGKEVKAYLDEGKLVPDDLMIKFMIKELKEVNNKPWLLEWISRE 291
+ ++ + G E++ LD+ + VP+ + I +K +KEV+ L W ++
Sbjct: 149 VVQRWKWGPELETQLDKLQFVPNMVHITQSLKIVKEVDAALSLFRWAKKQ 198
>At3g02490.1 68416.m00237 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 665
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +1
Query: 166 KEVKAYLDEGKLVPDDLMIKFMIKELKEVN 255
+ +KAY G +VP D+M++ ++K L+ V+
Sbjct: 376 RTLKAYTGNGNVVP-DVMLQHVLKSLRSVD 404
>At2g15480.1 68415.m01771 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 372
Score = 26.6 bits (56), Expect = 5.0
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Frame = +1
Query: 4 QEFGTRKLL-KALILGAPASG-----KGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELG 165
++F KLL K L +G KG + SR + + V G+K + +LG
Sbjct: 285 EQFYNEKLLTKVLRIGVNVGATELVKKGKLISRAQVEKAVREVIGGEKAEERRLWAKKLG 344
Query: 166 KEVKAYLDEGKLVPDDLMIKFM 231
+ KA ++EG +D+ KFM
Sbjct: 345 EMAKAAVEEGGSSYNDVN-KFM 365
>At4g39400.1 68417.m05577 brassinosteroid insensitive 1 (BRI1)
identical to GI:2392895
Length = 1196
Score = 26.2 bits (55), Expect = 6.6
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = -1
Query: 260 LLLTSFNS-FIMNLIIKSSGTSFPSSRYALTSLPSSVCFAMWSLS-LSPLDTCSILYFFT 87
L LT S F+ N I S + F S +LTSL S ++ L+ L +CS L F
Sbjct: 96 LSLTGLESLFLSNSHINGSVSGFKCSA-SLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLN 154
Query: 86 IRDDIVPFPD--AGAPKINA 33
+ + + FP +G K+N+
Sbjct: 155 VSSNTLDFPGKVSGGLKLNS 174
>At4g18480.1 68417.m02741 magnesium-chelatase subunit chlI,
chloroplast / Mg-protoporphyrin IX chelatase (CHLI) (CS)
(CH42) identical to SP|P161127 Magnesium-chelatase
subunit chlI, chloroplast precursor (Mg-protoporphyrin
IX chelatase) (Protein CS/CH-42) {Arabidopsis thaliana}
Length = 424
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +1
Query: 22 KLLKALILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKL 201
K+ +I+G +GK T +V +V +GD +G EV+ +++G+
Sbjct: 111 KIGGVMIMGDRGTGKSTTVRSLVDLLPEINVVAGDPYNSDPIDPEFMGVEVRERVEKGEQ 170
Query: 202 VP 207
VP
Sbjct: 171 VP 172
>At4g14820.1 68417.m02279 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 722
Score = 25.8 bits (54), Expect = 8.7
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = -1
Query: 242 NSFIMNLIIKSSGTSFPSSRYALTSLPS---SVCF--AMWSLSLSPLDTCSILYFFTIR 81
NSF+ NL + SS + + +S+PS S+ F + LS S +IL++ IR
Sbjct: 45 NSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIR 103
>At4g10220.1 68417.m01676 hypothetical protein IB1C3-1 protein,
Arabidopsis thaliana, AJ011845
Length = 400
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 237 LYHEFNH*IIRYKFSFVKVCFNLF 166
LYH+FN I + S C+NLF
Sbjct: 228 LYHDFNSRIFVFTKSGGNACYNLF 251
>At3g63110.1 68416.m07088 adenylate isopentenyltransferase 3 /
cytokinin synthase (IPT3) identical to adenylate
isopentenyltransferase (IPT3) [Arabidopsis thaliana]
GI:14279060
Length = 336
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 37 LILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDH 141
+I+GA +GK +S I ++ E ++S DK++ H
Sbjct: 45 VIMGATGTGKSRLSVDIATRFRAEIINS-DKIQVH 78
>At3g53510.1 68416.m05908 ABC transporter family protein breast
cancer resistance protein (BCRP), Homo sapiens,
EMBL:AF098951
Length = 739
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 40 ILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKLV 204
+LGA SGK T+ + + + E + GD + ++ L K + AY+ + L+
Sbjct: 142 VLGASGSGKSTLIDALANRISKESL-RGDITLNGEVLESSLHKVISAYVMQDDLL 195
>At1g59870.1 68414.m06745 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1469
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +1
Query: 37 LILGAPASGKGTISSRIVKKYNIEHVSSGDKLRDHIAKQTELGKEVKAYLDEGKL 201
L+LG P+SGK T+ + K + SGD + + ++ AY+ + L
Sbjct: 201 LLLGPPSSGKTTLLLALAGKLDKSLQVSGDITYNGYQLDEFVPRKTSAYISQNDL 255
>At1g19525.1 68414.m02432 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 316
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/47 (25%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +1
Query: 1 LQEFGTR---KLLKALILGAPASGKGTISSRIVKKYNIEHVSSGDKL 132
L+ +G R K+ +A+ILG +GK + R++K+ + + + +++
Sbjct: 36 LKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEV 82
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,022,787
Number of Sequences: 28952
Number of extensions: 134138
Number of successful extensions: 532
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 469342752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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