Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0420
         (644 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g76040.2 68414.m08829 calcium-dependent protein kinase, putat...    27   8.1  
At1g76040.1 68414.m08830 calcium-dependent protein kinase, putat...    27   8.1  

>At1g76040.2 68414.m08829 calcium-dependent protein kinase, putative
           / CDPK, putative similar to calcium-dependent protein
           kinase GB:AAC25423 GI:3283996 [Nicotiana tabacum]
          Length = 534

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 346 VYFEALRNSVHYLGSKIY*VSIKDITSVID 435
           + F+ LRN +H LGSK+    IK +    D
Sbjct: 405 ITFDELRNGLHRLGSKLTESEIKQLMEAAD 434


>At1g76040.1 68414.m08830 calcium-dependent protein kinase, putative
           / CDPK, putative similar to calcium-dependent protein
           kinase GB:AAC25423 GI:3283996 [Nicotiana tabacum]
          Length = 323

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 346 VYFEALRNSVHYLGSKIY*VSIKDITSVID 435
           + F+ LRN +H LGSK+    IK +    D
Sbjct: 194 ITFDELRNGLHRLGSKLTESEIKQLMEAAD 223


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,672,614
Number of Sequences: 28952
Number of extensions: 174797
Number of successful extensions: 258
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 258
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1334473344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)