Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0418
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.3  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   5.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   9.9  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 581 KEILKTNLHYTFTDFFFLSI 522
           K +LKTN +  F   F+LS+
Sbjct: 313 KTVLKTNKYCNFIILFYLSV 332


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2

Query: 371 YYILKYVILNCQTPHSDVECYSCFA*NGS 457
           +Y  K+     Q   SD  C +CF  NG+
Sbjct: 674 FYENKFYRQEAQWTSSDNPCTTCFCENGN 702


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 452 RSMRNKNNIRHRYEGFDNLK*H 387
           R+ R +N ++    GF NL+ H
Sbjct: 57  RNARERNRVKQVNNGFANLRQH 78


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 95  FQWYCIHSLGTFNGDFI 45
           FQ Y    +GTFN  FI
Sbjct: 435 FQMYAQFIVGTFNSVFI 451


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,118
Number of Sequences: 336
Number of extensions: 3718
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)