Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0415
         (568 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    37   0.38 
UniRef50_Q0YRE6 Cluster: Amino acid adenylation; n=1; Chlorobium...    35   1.2  
UniRef50_Q6ZVB9 Cluster: CDNA FLJ42787 fis, clone BRAWH3006792; ...    33   4.7  
UniRef50_UPI0000EB40CD Cluster: espin-like; n=3; Eutheria|Rep: e...    33   6.2  
UniRef50_A7EKC5 Cluster: Putative uncharacterized protein; n=1; ...    32   8.1  
UniRef50_A6RMB5 Cluster: Putative uncharacterized protein; n=1; ...    32   8.1  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 36.7 bits (81), Expect = 0.38
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +2

Query: 167 RRVDELTAYMVLSGYWSP 220
           R VDELTA++VLSGYWSP
Sbjct: 158 RWVDELTAHLVLSGYWSP 175


>UniRef50_Q0YRE6 Cluster: Amino acid adenylation; n=1; Chlorobium
            ferrooxidans DSM 13031|Rep: Amino acid adenylation -
            Chlorobium ferrooxidans DSM 13031
          Length = 4189

 Score = 35.1 bits (77), Expect = 1.2
 Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
 Frame = +1

Query: 178  RAHSLHGVKWLLEPIDIYNV-NALPTLR-YKFSSIVTTAAPPCKPKRITASRQK*ARWWY 351
            R HS   ++W LE  ++Y+  +AL  +R ++FS +  +AAP  +   +  S +K  R+++
Sbjct: 1721 RRHSARDMEWTLESEEVYSTSDALLRIREHQFSELSMSAAPLWRAGFVDVSGEK-MRFFW 1779

Query: 352  LPVHNGV 372
            L +H+ +
Sbjct: 1780 LALHHSI 1786


>UniRef50_Q6ZVB9 Cluster: CDNA FLJ42787 fis, clone BRAWH3006792;
           n=1; Homo sapiens|Rep: CDNA FLJ42787 fis, clone
           BRAWH3006792 - Homo sapiens (Human)
          Length = 210

 Score = 33.1 bits (72), Expect = 4.7
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +2

Query: 47  RSPR*EGARRPRRSTGRAPGPKKR 118
           RSPR  G+R+PR S  R PG K+R
Sbjct: 165 RSPRARGSRKPRSSRTRGPGKKRR 188


>UniRef50_UPI0000EB40CD Cluster: espin-like; n=3; Eutheria|Rep:
           espin-like - Canis familiaris
          Length = 1002

 Score = 32.7 bits (71), Expect = 6.2
 Identities = 17/32 (53%), Positives = 21/32 (65%)
 Frame = -3

Query: 377 RKTPLCTGRYHHLAYFCREAVMRFGLQGGAAV 282
           R  PLC GR H L++ CREAV R  L+ G +V
Sbjct: 619 RPGPLCLGRSHSLSW-CREAVAREILECGVSV 649


>UniRef50_A7EKC5 Cluster: Putative uncharacterized protein; n=1;
           Sclerotinia sclerotiorum 1980|Rep: Putative
           uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 770

 Score = 32.3 bits (70), Expect = 8.1
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = -1

Query: 127 IKNPFFRARGPAGTPTRSPRALLARGPRMWD 35
           + N FF AR   GT T S   LLAR P  W+
Sbjct: 308 LMNVFFAARDSVGTVTSSMLFLLARSPESWE 338


>UniRef50_A6RMB5 Cluster: Putative uncharacterized protein; n=1;
           Botryotinia fuckeliana B05.10|Rep: Putative
           uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 374

 Score = 32.3 bits (70), Expect = 8.1
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = -1

Query: 127 IKNPFFRARGPAGTPTRSPRALLARGPRMWD 35
           + N FF AR   GT T S   LLAR P  W+
Sbjct: 308 LMNVFFAARDSVGTVTSSMLFLLARSPESWE 338


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,437,506
Number of Sequences: 1657284
Number of extensions: 12017316
Number of successful extensions: 29880
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 28722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29866
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38321472724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)