Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0414
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    24   0.94 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   2.2  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   2.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   3.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   3.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   3.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   3.8  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   5.0  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   6.6  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 62  VNGEEQITQRLKHIHLDTNSSMQPKAEVPPMCPKSKLPLLHL 187
           VN    IT   K  HL++ S++Q K +   +    K  L+HL
Sbjct: 235 VNHSAPITTCNKKQHLESPSALQAKVDPLKIPEAEKRKLIHL 276


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/30 (26%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
 Frame = -3

Query: 477 RLQRYTYIVMYTSWHIF---VRLQKARVLT 397
           ++Q +TY+++ T+W +     R++  + LT
Sbjct: 41  KIQAWTYLILLTTWTVISASTRIKSFKFLT 70


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 380 MAACHFVRTRAFWSRTKI 433
           ++AC+ V  R  WS++K+
Sbjct: 222 ISACYAVIVRTIWSKSKL 239


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = -3

Query: 531 TIYRKLTQIE*RRSFLSIRLQRYTYIVMYTSWHIFVRLQKARVLTKWHAAIYNNTFILT 355
           T+  K   I   +  + IR ++    VMY  + +  RL +  +     A I  NT++LT
Sbjct: 675 TLPGKTKMIAHLKDKMKIRHRKRWSQVMYMYYLLGHRLMELPISVDRKAVIAENTYLLT 733


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = -3

Query: 531 TIYRKLTQIE*RRSFLSIRLQRYTYIVMYTSWHIFVRLQKARVLTKWHAAIYNNTFILT 355
           T+  K   I   +  + IR ++    VMY  + +  RL +  +     A I  NT++LT
Sbjct: 675 TLPGKTKMIAHLKDKMKIRHRKRWSQVMYMYYLLGHRLMELPISVDRKAVIAENTYLLT 733


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = -3

Query: 531 TIYRKLTQIE*RRSFLSIRLQRYTYIVMYTSWHIFVRLQKARVLTKWHAAIYNNTFILT 355
           T+  K   I   +  + IR ++    VMY  + +  RL +  +     A I  NT++LT
Sbjct: 675 TLPGKTKMIAHLKDKMKIRHRKRWSQVMYMYYLLGHRLMELPISVDRKAVIAENTYLLT 733


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = -3

Query: 531 TIYRKLTQIE*RRSFLSIRLQRYTYIVMYTSWHIFVRLQKARVLTKWHAAIYNNTFILT 355
           T+  K   I   +  + IR ++    VMY  + +  RL +  +     A I  NT++LT
Sbjct: 675 TLPGKTKMIAHLKDKMKIRHRKRWSQVMYMYYLLGHRLMELPISVDRKAVIAENTYLLT 733


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 121 AVCIQMYVF*SLCDLFFTVYK 59
           A+C+ MY      DL+F +Y+
Sbjct: 263 ALCLTMYKLSLTEDLYFAIYE 283


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 187 HSFRWSEENRGRNTS 231
           +SF W+    G NTS
Sbjct: 282 NSFNWTANGHGHNTS 296


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,762
Number of Sequences: 336
Number of extensions: 3510
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)