Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0414
(647 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 30 1.4
SB_40455| Best HMM Match : Ldl_recept_b (HMM E-Value=0.019) 30 1.9
SB_5725| Best HMM Match : Ldl_recept_b (HMM E-Value=0.019) 30 1.9
SB_31722| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_10039| Best HMM Match : DUF1103 (HMM E-Value=3) 29 2.5
SB_46228| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_41763| Best HMM Match : S_layer_C (HMM E-Value=1.2) 29 2.5
SB_9492| Best HMM Match : Rho_N (HMM E-Value=2.1e-12) 29 2.5
SB_33392| Best HMM Match : zf-CCHC (HMM E-Value=0.043) 29 3.3
SB_31739| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_39894| Best HMM Match : Pox_A32 (HMM E-Value=0.59) 29 4.3
SB_35636| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_27139| Best HMM Match : Capsid_Iridovir (HMM E-Value=1.5) 29 4.3
SB_44159| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_42076| Best HMM Match : DUF1103 (HMM E-Value=3.9) 29 4.3
SB_41761| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.025) 29 4.3
SB_30293| Best HMM Match : Rho_N (HMM E-Value=0.0017) 28 5.7
SB_36494| Best HMM Match : DUF1103 (HMM E-Value=1.8) 28 5.7
SB_57927| Best HMM Match : DUF1103 (HMM E-Value=2.4) 28 7.5
SB_57062| Best HMM Match : Pox_A32 (HMM E-Value=0.006) 28 7.5
SB_56989| Best HMM Match : DUF1103 (HMM E-Value=2.4) 28 7.5
SB_50851| Best HMM Match : DUF1103 (HMM E-Value=2.4) 28 7.5
SB_47775| Best HMM Match : Supt5 (HMM E-Value=9.7) 28 7.5
SB_46876| Best HMM Match : DUF1103 (HMM E-Value=2.4) 28 7.5
SB_43364| Best HMM Match : Pox_A32 (HMM E-Value=0.0078) 28 7.5
SB_40151| Best HMM Match : DUF1103 (HMM E-Value=2.4) 28 7.5
SB_39136| Best HMM Match : DUF1103 (HMM E-Value=2.4) 28 7.5
SB_38626| Best HMM Match : Supt5 (HMM E-Value=9.7) 28 7.5
SB_37988| Best HMM Match : Rho_N (HMM E-Value=0.0007) 28 7.5
SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 7.5
SB_33960| Best HMM Match : Borrelia_orfA (HMM E-Value=2) 28 7.5
SB_33794| Best HMM Match : DUF1103 (HMM E-Value=2.4) 28 7.5
SB_31612| Best HMM Match : Aminotran_1_2 (HMM E-Value=7.8e-12) 28 7.5
SB_30160| Best HMM Match : Supt5 (HMM E-Value=7.5) 28 7.5
SB_15820| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_2228| Best HMM Match : Pox_A32 (HMM E-Value=0.099) 28 7.5
SB_2134| Best HMM Match : Endonuclease_7 (HMM E-Value=0.057) 28 7.5
SB_2097| Best HMM Match : DUF1103 (HMM E-Value=2.4) 28 7.5
SB_57540| Best HMM Match : Supt5 (HMM E-Value=9.7) 28 7.5
SB_36600| Best HMM Match : DUF1103 (HMM E-Value=2.4) 28 7.5
SB_31661| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_24327| Best HMM Match : DUF1103 (HMM E-Value=2.4) 28 7.5
SB_23275| Best HMM Match : IncA (HMM E-Value=0.43) 28 7.5
SB_19114| Best HMM Match : E-MAP-115 (HMM E-Value=0.44) 28 7.5
SB_10414| Best HMM Match : Rho_N (HMM E-Value=0.0015) 28 7.5
SB_8805| Best HMM Match : DUF1103 (HMM E-Value=2.4) 28 7.5
SB_3818| Best HMM Match : Pox_A32 (HMM E-Value=0.022) 28 7.5
SB_1446| Best HMM Match : DUF1103 (HMM E-Value=2.4) 28 7.5
SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37) 27 9.9
SB_14486| Best HMM Match : Vicilin_N (HMM E-Value=7) 27 9.9
SB_17631| Best HMM Match : DUF1103 (HMM E-Value=3.2) 27 9.9
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 107 LDTNSSMQPKAEVPPMCPKSKLPLLHLTPSGGQKKIEGATPQSKSNP 247
L + S P + VPP + P ++TP + + G P++K+ P
Sbjct: 607 LPKHESPSPPSRVPPQPETAPKPFPNITPPEVRPSLPGTPPETKTKP 653
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2
Query: 62 VNGEEQITQRLKHIHLDTNSSMQPKAEVPPMCPKSKLP 175
V EE++TQ K L T S+ +P A+ PP P+ LP
Sbjct: 657 VKEEERVTQPDKTSEL-TESTKRPAADAPPPTPEPSLP 693
>SB_40455| Best HMM Match : Ldl_recept_b (HMM E-Value=0.019)
Length = 122
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 1 LQEFGTRVELTDCLNNNLNVCKR*RTNHTTIKTH 102
L G +V TD N NL VC+ +N T+KT+
Sbjct: 76 LDHVGRKVYFTDYFNKNLRVCELDGSNCKTLKTN 109
>SB_5725| Best HMM Match : Ldl_recept_b (HMM E-Value=0.019)
Length = 409
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 1 LQEFGTRVELTDCLNNNLNVCKR*RTNHTTIKTH 102
L G +V TD N NL VC+ +N T+KT+
Sbjct: 226 LDHVGRKVYFTDYFNKNLRVCELDGSNCKTLKTN 259
>SB_31722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H ILSEHG+F
Sbjct: 2 RKLRTNAGDKVTSDAKE--VALAAVHNTKYCIPLDHPILSEHGVF 44
>SB_10039| Best HMM Match : DUF1103 (HMM E-Value=3)
Length = 270
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H ILSEHG+F
Sbjct: 134 RKLRTNAGDKVTSDAKE--VALATVHNTKYCIPLDHPILSEHGVF 176
>SB_46228| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -3
Query: 156 HMGGTSAFGCILLFVSKCMCFNRCVICSSPFTNIKII 46
H+ T+ G +FV KC+ F+R CSS F I+ +
Sbjct: 29 HISSTNRDGIASVFV-KCLFFSRFAFCSSKFLAIEFL 64
>SB_41763| Best HMM Match : S_layer_C (HMM E-Value=1.2)
Length = 393
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L+ KYC H ILSEHG F
Sbjct: 134 RKLRTNAGDKVTSDAKE--VALVAVHNTKYCIPLNHPILSEHGAF 176
>SB_9492| Best HMM Match : Rho_N (HMM E-Value=2.1e-12)
Length = 1970
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H ILSEHG+F
Sbjct: 1377 RKLRTNAGDKVTSDAKE--VALAAVHNTKYCIPLDHPILSEHGVF 1419
>SB_33392| Best HMM Match : zf-CCHC (HMM E-Value=0.043)
Length = 348
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 92 LKHIHLDTNSSMQPKAEVPPMCPKSKLPLLHL-TPSGGQKKIEGATPQSKSNP 247
LK H + K E+ P CP PLLH +P + PQ+ + P
Sbjct: 21 LKRGHPQRECRSKKKCEIVPSCPYFHHPLLHAHSPPASANAVTPIPPQADNVP 73
>SB_31739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 481 REKTSASLDLR-QFSVNCGMVISFIKDCCNYRNV 579
R + SA++ +R QFS N M+ F CC R+V
Sbjct: 32 RSQFSANVRMRSQFSANVHMLAQFFPPCCEMRSV 65
>SB_39894| Best HMM Match : Pox_A32 (HMM E-Value=0.59)
Length = 565
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H ILSEHG F
Sbjct: 134 RKLRTNAGDKVTSDAKE--VALATVHNTKYCIPLDHPILSEHGAF 176
>SB_35636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H ILSEHG F
Sbjct: 99 RKLRTNAGDKVTSDAKE--VALATVHNTKYCIPLDHPILSEHGAF 141
>SB_27139| Best HMM Match : Capsid_Iridovir (HMM E-Value=1.5)
Length = 715
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H ILSEHG F
Sbjct: 296 RKLRTNAGDKATSDAKE--VALATVHNTKYCIPLDHPILSEHGAF 338
>SB_44159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 258
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H ILSEHG F
Sbjct: 67 RKLRTNAGDKVTSDAKE--VALATVHNTKYCIPLDHPILSEHGAF 109
>SB_42076| Best HMM Match : DUF1103 (HMM E-Value=3.9)
Length = 235
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H ILSEHG F
Sbjct: 134 RKLRTNAGDKVTSDAKE--VALATVHNTKYCIPLDHPILSEHGAF 176
>SB_41761| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.025)
Length = 1480
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H ILSEHG F
Sbjct: 1301 RKLRTNAGDKVTSDAKE--VALAAVHNTKYCIPLNHPILSEHGAF 1343
>SB_30293| Best HMM Match : Rho_N (HMM E-Value=0.0017)
Length = 1078
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3
Query: 366 KYCYKWQHAILSEHGLF 416
KYC H ILSEHG F
Sbjct: 826 KYCIPLDHPILSEHGAF 842
>SB_36494| Best HMM Match : DUF1103 (HMM E-Value=1.8)
Length = 353
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 134 RKLRTNASDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 176
>SB_57927| Best HMM Match : DUF1103 (HMM E-Value=2.4)
Length = 212
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 76 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 118
>SB_57062| Best HMM Match : Pox_A32 (HMM E-Value=0.006)
Length = 485
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 2 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 44
>SB_56989| Best HMM Match : DUF1103 (HMM E-Value=2.4)
Length = 835
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 699 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 741
>SB_50851| Best HMM Match : DUF1103 (HMM E-Value=2.4)
Length = 405
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 134 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 176
>SB_47775| Best HMM Match : Supt5 (HMM E-Value=9.7)
Length = 280
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 2 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 44
>SB_46876| Best HMM Match : DUF1103 (HMM E-Value=2.4)
Length = 364
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 134 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 176
>SB_43364| Best HMM Match : Pox_A32 (HMM E-Value=0.0078)
Length = 759
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 134 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 176
>SB_40151| Best HMM Match : DUF1103 (HMM E-Value=2.4)
Length = 348
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 134 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 176
>SB_39136| Best HMM Match : DUF1103 (HMM E-Value=2.4)
Length = 290
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 76 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 118
>SB_38626| Best HMM Match : Supt5 (HMM E-Value=9.7)
Length = 280
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 2 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 44
>SB_37988| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 1018
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 575 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 617
>SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 2629
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 1839 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 1881
>SB_33960| Best HMM Match : Borrelia_orfA (HMM E-Value=2)
Length = 662
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 526 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 568
>SB_33794| Best HMM Match : DUF1103 (HMM E-Value=2.4)
Length = 270
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 134 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 176
>SB_31612| Best HMM Match : Aminotran_1_2 (HMM E-Value=7.8e-12)
Length = 398
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 630 VYLITYSLIDYYRHR*VHITIVTAIFNKTYHHTTI 526
+ +IT ++I + I +T I N YHHTTI
Sbjct: 59 ITIITITVITIITITVITIITITIIINYDYHHTTI 93
>SB_30160| Best HMM Match : Supt5 (HMM E-Value=7.5)
Length = 280
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 2 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 44
>SB_15820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1998
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 1471 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 1513
>SB_2228| Best HMM Match : Pox_A32 (HMM E-Value=0.099)
Length = 771
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 235 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 277
>SB_2134| Best HMM Match : Endonuclease_7 (HMM E-Value=0.057)
Length = 1124
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 899 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 941
>SB_2097| Best HMM Match : DUF1103 (HMM E-Value=2.4)
Length = 375
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 239 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 281
>SB_57540| Best HMM Match : Supt5 (HMM E-Value=9.7)
Length = 280
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 2 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 44
>SB_36600| Best HMM Match : DUF1103 (HMM E-Value=2.4)
Length = 412
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 134 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 176
>SB_31661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 864
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 185 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 227
>SB_24327| Best HMM Match : DUF1103 (HMM E-Value=2.4)
Length = 203
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 134 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 176
>SB_23275| Best HMM Match : IncA (HMM E-Value=0.43)
Length = 1176
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 134 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 176
>SB_19114| Best HMM Match : E-MAP-115 (HMM E-Value=0.44)
Length = 532
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 2 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 44
>SB_10414| Best HMM Match : Rho_N (HMM E-Value=0.0015)
Length = 916
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 433 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 475
>SB_8805| Best HMM Match : DUF1103 (HMM E-Value=2.4)
Length = 201
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 134 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 176
>SB_3818| Best HMM Match : Pox_A32 (HMM E-Value=0.022)
Length = 766
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 134 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 176
>SB_1446| Best HMM Match : DUF1103 (HMM E-Value=2.4)
Length = 235
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 282 RRLHNRKFNTTSSFRKE*GIFLLETLE*KYCYKWQHAILSEHGLF 416
R+L + +S KE + L KYC H IL EHG+F
Sbjct: 134 RKLRTNAGDKATSDAKE--VALAAVHNTKYCIPLDHPILGEHGVF 176
>SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37)
Length = 1188
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = +1
Query: 388 MPFCQNTGFLESYKNMPRCIHNYVRISLKTNREKTSASLDLRQ 516
MP C+ G + Y C H ++ + TN + S ++ Q
Sbjct: 706 MPGCRRPGVADLYGRCVECYHQCIKTFINTNEQIASPAVSSPQ 748
>SB_14486| Best HMM Match : Vicilin_N (HMM E-Value=7)
Length = 278
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 155 CPK-SKLPLLHLTPSGGQKKIEGATPQSKSNPW 250
CPK + +L + +GG+KK++G S P+
Sbjct: 97 CPKETHYEILEVNVNGGEKKLQGRLDSSSGEPY 129
>SB_17631| Best HMM Match : DUF1103 (HMM E-Value=3.2)
Length = 270
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 366 KYCYKWQHAILSEHGLF 416
KYC H IL EHG+F
Sbjct: 160 KYCIPLDHPILGEHGVF 176
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,003,832
Number of Sequences: 59808
Number of extensions: 409873
Number of successful extensions: 1162
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1162
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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