Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0414
(647 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF024494-9|AAB70333.1| 336|Caenorhabditis elegans Serpentine re... 31 0.70
Z73896-8|CAA98061.1| 525|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z73422-12|CAJ76980.1| 525|Caenorhabditis elegans Hypothetical p... 30 1.6
Z73422-11|CAA97768.1| 423|Caenorhabditis elegans Hypothetical p... 30 1.6
Z73422-10|CAA97772.1| 525|Caenorhabditis elegans Hypothetical p... 30 1.6
AF024494-12|AAB70332.3| 332|Caenorhabditis elegans Serpentine r... 29 2.8
Z81073-4|CAD56580.1| 288|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81073-3|CAC42296.1| 288|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z75554-2|CAA99954.1| 526|Caenorhabditis elegans Hypothetical pr... 28 5.0
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 28 6.6
U29535-11|AAK31456.1| 947|Caenorhabditis elegans Hypothetical p... 28 6.6
L23651-13|AAA27957.3| 251|Caenorhabditis elegans Hypothetical p... 28 6.6
AF026211-2|AAB71294.1| 440|Caenorhabditis elegans Hypothetical ... 28 6.6
>AF024494-9|AAB70333.1| 336|Caenorhabditis elegans Serpentine
receptor, class u protein27 protein.
Length = 336
Score = 31.1 bits (67), Expect = 0.70
Identities = 11/55 (20%), Positives = 28/55 (50%)
Frame = -3
Query: 489 FLSIRLQRYTYIVMYTSWHIFVRLQKARVLTKWHAAIYNNTFILTSRVEKYPIPY 325
F +I + + T ++ + +++RL + T W A++ N +++ + Y + Y
Sbjct: 70 FTAISISQLTCVLFFIFDFVYIRLMTTGMFTSWCASVSPNHYLMVLYISTYYVNY 124
>Z73896-8|CAA98061.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.9 protein.
Length = 525
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 451 NYVRISLKTNREKTSASLDLRQFSVNCGMVISFIKDCCNYRNVNLSMTI 597
N +SLK N+E L+ NC + DCC Y VN +T+
Sbjct: 368 NLRHLSLKNNKEGVRDD-SLQLIIKNCSKLEELSLDCCEYLTVNSLITL 415
>Z73422-12|CAJ76980.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.9 protein.
Length = 525
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 451 NYVRISLKTNREKTSASLDLRQFSVNCGMVISFIKDCCNYRNVNLSMTI 597
N +SLK N+E L+ NC + DCC Y VN +T+
Sbjct: 368 NLRHLSLKNNKEGVRDD-SLQLIIKNCSKLEELSLDCCEYLTVNSLITL 415
>Z73422-11|CAA97768.1| 423|Caenorhabditis elegans Hypothetical
protein B0564.6b protein.
Length = 423
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 451 NYVRISLKTNREKTSASLDLRQFSVNCGMVISFIKDCCNYRNVNLSMTI 597
N +SLK N+E L+ NC + DCC Y VN +T+
Sbjct: 266 NLRHLSLKNNKEGVRDD-SLQLIIKNCSKLEELSLDCCEYLTVNSLITL 313
>Z73422-10|CAA97772.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.6a protein.
Length = 525
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 451 NYVRISLKTNREKTSASLDLRQFSVNCGMVISFIKDCCNYRNVNLSMTI 597
N +SLK N+E L+ NC + DCC Y VN +T+
Sbjct: 368 NLRHLSLKNNKEGVRDD-SLQLIIKNCSKLEELSLDCCEYLTVNSLITL 415
>AF024494-12|AAB70332.3| 332|Caenorhabditis elegans Serpentine
receptor, class u protein28 protein.
Length = 332
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/55 (21%), Positives = 27/55 (49%)
Frame = -3
Query: 489 FLSIRLQRYTYIVMYTSWHIFVRLQKARVLTKWHAAIYNNTFILTSRVEKYPIPY 325
F +I + ++T ++ + + +RL + T W A+ N +I+ + Y + Y
Sbjct: 72 FTAICISQFTCLLFFIFDFVHIRLMTTGIFTSWCASSAPNHYIMALYIATYYVNY 126
>Z81073-4|CAD56580.1| 288|Caenorhabditis elegans Hypothetical
protein F30F8.9b protein.
Length = 288
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 544 LSPYHNLPKTDANRVTPKFSLDSSSTIYVHS 452
L Y N TD N++ P LDSS + VH+
Sbjct: 170 LKTYGNPSSTDENKMKPLDKLDSSEMLLVHN 200
>Z81073-3|CAC42296.1| 288|Caenorhabditis elegans Hypothetical
protein F30F8.9a protein.
Length = 288
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 544 LSPYHNLPKTDANRVTPKFSLDSSSTIYVHS 452
L Y N TD N++ P LDSS + VH+
Sbjct: 170 LKTYGNPSSTDENKMKPLDKLDSSEMLLVHN 200
>Z75554-2|CAA99954.1| 526|Caenorhabditis elegans Hypothetical
protein ZC455.3 protein.
Length = 526
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +1
Query: 277 SHAASTIESSTPRVLSVRNRVFFYSRR*NKSIVINGSMPFCQNTGFLESYKNMP 438
S +T++ ++LS+RN S +++ + MP TG +E+++ MP
Sbjct: 275 SFKTTTLDEEFNKILSLRNNTILVSFG---TVIQSSDMPDDFKTGLIEAFRRMP 325
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 118 QQYAAKSRGSSHVSKKQASVVAPHSFRWSEENRG 219
Q+ +SRGS +S+ ++ VV +RW +++ G
Sbjct: 1471 QRSRHRSRGSYKISESKSKVVRGKDWRWEDQDGG 1504
>U29535-11|AAK31456.1| 947|Caenorhabditis elegans Hypothetical
protein C25H3.11 protein.
Length = 947
Score = 27.9 bits (59), Expect = 6.6
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Frame = -1
Query: 323 ERTRGVELSIVEAAWEGCPAEASVAKD*TCFEVLRPRFSSDHLK---E*GATTEACFLDT 153
+R +ELS V + WE P + ++ D T ++ R S H + + +E+ T
Sbjct: 585 QRVLALELSGVSSRWELSPKQHYLSVDVTVNDMSVQRLRSGHPRPKSKFAELSESLLYST 644
Query: 152 WEEPRLLAAYCCLYPNVCVLIVV*FVLHRL-QTLRLLFKQSVNSTLVPNS 6
E ++L +V V F +H + ++ RL+ K VN L P S
Sbjct: 645 AESTKMLLTVGRDGTDVISSKVPMFSMHYIRKSPRLIVKHMVNCRLRPVS 694
>L23651-13|AAA27957.3| 251|Caenorhabditis elegans Hypothetical
protein C29E4.8 protein.
Length = 251
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -3
Query: 621 ITYSLIDYYRHR*VHITIVTA--IFNKTYHHTTIYRKLTQIE*RRSFL 484
+T L+DYY+ VH+ + A + + H ++ K TQ + R SF+
Sbjct: 204 MTVPLVDYYKKHGVHVAVDAAKPMTDVKAHIDQVFAKFTQKKERVSFV 251
>AF026211-2|AAB71294.1| 440|Caenorhabditis elegans Hypothetical
protein T13B5.3 protein.
Length = 440
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -3
Query: 540 HHTTIYRKLTQIE*RRSFLSIRLQRYTYIVMYTSWHIFVRLQKARVLTKWHAAIYNNTFI 361
H TT+Y LT + + YT V W++ RVL +H+A ++N +
Sbjct: 329 HDTTVYAFLTTFGDEERVIEGGMPHYTASVAVELWNLKNGGPSVRVL--FHSAFHHNYHV 386
Query: 360 LTSRVEKYP 334
+T + P
Sbjct: 387 ITHLAKGCP 395
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,829,183
Number of Sequences: 27780
Number of extensions: 311737
Number of successful extensions: 907
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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