Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0413
         (572 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         70   6e-14
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.19 
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     28   0.19 
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   5.3  
AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione S-tran...    23   5.3  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   7.1  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    23   7.1  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   9.3  

>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 69.7 bits (163), Expect = 6e-14
 Identities = 36/73 (49%), Positives = 40/73 (54%)
 Frame = +2

Query: 353 GGIEHGKPQYQILVGGPNNWVPTSGSNVPPGAFPGGETEDGEPLYIGRVRHEGSLTTGKV 532
           GG E      ++LV     W   S   VP GA  GG T DGE LY+GR  HEGS T GKV
Sbjct: 58  GGQETLVEHVEVLVHKQLIWDTASAGQVPLGAVVGGHTSDGEILYVGRAYHEGSQTIGKV 117

Query: 533 QQSHGVCYISFGG 571
           Q SH   YI +GG
Sbjct: 118 QCSHNCIYIPYGG 130



 Score = 49.2 bits (112), Expect = 9e-08
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +2

Query: 410 WVPTSGSN-VPPGAFPGGETEDGEPLYIGRVRHEGSLTTGKVQQSHGVCYISFGG 571
           W+PTS     PP   PGG   DG  +++GR  H G L   KV       Y+++GG
Sbjct: 5   WIPTSVHGPYPPHMVPGGVDSDGAQIFVGRAHHAGDLLPAKVIPDKTAAYVAYGG 59



 Score = 42.3 bits (95), Expect = 1e-05
 Identities = 18/32 (56%), Positives = 21/32 (65%)
 Frame = +1

Query: 259 GEPLYVARAVHEGATIPGKLVPSHGCAYVPXG 354
           GE LYV RA HEG+   GK+  SH C Y+P G
Sbjct: 98  GEILYVGRAYHEGSQTIGKVQCSHNCIYIPYG 129



 Score = 34.3 bits (75), Expect = 0.003
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 250 DCSGEPLYVARAVHEGATIPGKLVPSHGCAYVPXG 354
           D  G  ++V RA H G  +P K++P    AYV  G
Sbjct: 24  DSDGAQIFVGRAHHAGDLLPAKVIPDKTAAYVAYG 58


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 28.3 bits (60), Expect = 0.19
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = +2

Query: 374 PQYQILVGGPNNWVPTSGSN--VPPGAFPGGETEDGEPLYIGRVRHEGSLTTGKVQQSHG 547
           P    L+GGPN+ +P   S   VPP   P  + +   PL I  V H G   +G +  S  
Sbjct: 101 PHSNHLLGGPNHHLPPGASPGLVPP---PQQQQQQQAPLGIPSVAHGGG--SGAIHASPN 155

Query: 548 VCYISFGG 571
               S GG
Sbjct: 156 AQNPSSGG 163


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 28.3 bits (60), Expect = 0.19
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -3

Query: 510 PSWRTRPMYKGSPSSVSPPGNAPGGTLDPLVGTQLFGPPT 391
           P W  RP + G P  + PP + P  +     GT +  P T
Sbjct: 94  PPWHPRPPFGGRPWWLRPPFHRPTTSTAAPEGTSVASPTT 133


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -3

Query: 507 SWRTRPMYKGSPSSVSPPGNAPGGTLDPLVG 415
           SW TR     +     PP  AP G +  ++G
Sbjct: 717 SWGTRENPVDAAKKAPPPVAAPAGKMQKILG 747


>AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione
           S-transferase u1 protein.
          Length = 233

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 399 PPTKIWY*GFPCSIPPXWNVSA 334
           P  + WY GF  + P  W ++A
Sbjct: 180 PKVQAWYDGFKQAHPSLWAIAA 201


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 483  KGSPSSVSPPGNAPGGTLDPLV 418
            KG+P    P  + PGG+  P++
Sbjct: 1136 KGAPMKFGPGVSGPGGSKTPIL 1157


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +2

Query: 131 PPLATLEATEETYPLRLEEPVYGLMFQE 214
           PP+A++EA + T+  ++  P Y  + Q+
Sbjct: 314 PPVASVEAVKFTHIFQILPPSYDRLCQQ 341


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -3

Query: 510 PSWRTRPMYKGSPSSVSPPG 451
           P  R  P  KG P  + PPG
Sbjct: 624 PGLRGEPGPKGEPGLLGPPG 643


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,265
Number of Sequences: 2352
Number of extensions: 12784
Number of successful extensions: 104
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 104
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)