BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0412
(651 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001732-1|AAN71487.1| 199|Drosophila melanogaster RE70963p pro... 91 9e-19
AE014297-910|AAF54361.2| 199|Drosophila melanogaster CG33936-PB... 91 9e-19
AE014297-909|AAF54360.2| 199|Drosophila melanogaster CG33936-PA... 91 9e-19
AJ421016-1|CAD12856.1| 206|Drosophila melanogaster hypothetical... 91 2e-18
AY058763-1|AAL13992.1| 696|Drosophila melanogaster SD03358p pro... 53 3e-07
AE014296-213|AAF47467.1| 696|Drosophila melanogaster CG9139-PA ... 53 3e-07
AY061244-1|AAL28792.1| 664|Drosophila melanogaster LD18373p pro... 30 2.4
AE014298-1641|AAF48061.1| 664|Drosophila melanogaster CG11696-P... 30 2.4
AF162681-1|AAD50777.1| 737|Drosophila melanogaster maroon-like ... 30 3.1
AY118814-1|AAM50674.1| 448|Drosophila melanogaster GH23407p pro... 29 7.2
AY061576-1|AAL29124.1| 987|Drosophila melanogaster SD02803p pro... 29 7.2
AE014134-2440|AAF53361.2| 448|Drosophila melanogaster CG33115-P... 29 7.2
>BT001732-1|AAN71487.1| 199|Drosophila melanogaster RE70963p
protein.
Length = 199
Score = 91.5 bits (217), Expect = 9e-19
Identities = 35/46 (76%), Positives = 44/46 (95%)
Frame = +2
Query: 512 MERESNPMEALCRSGCGFYGNPSTDGLCSVCFKEALKKKQQPPATT 649
MERESNPM+ +CRSGCGFYGNP+TDGLCSVC+K++L+KKQQPP ++
Sbjct: 1 MERESNPMQPMCRSGCGFYGNPATDGLCSVCYKDSLRKKQQPPVSS 46
>AE014297-910|AAF54361.2| 199|Drosophila melanogaster CG33936-PB,
isoform B protein.
Length = 199
Score = 91.5 bits (217), Expect = 9e-19
Identities = 35/46 (76%), Positives = 44/46 (95%)
Frame = +2
Query: 512 MERESNPMEALCRSGCGFYGNPSTDGLCSVCFKEALKKKQQPPATT 649
MERESNPM+ +CRSGCGFYGNP+TDGLCSVC+K++L+KKQQPP ++
Sbjct: 1 MERESNPMQPMCRSGCGFYGNPATDGLCSVCYKDSLRKKQQPPVSS 46
>AE014297-909|AAF54360.2| 199|Drosophila melanogaster CG33936-PA,
isoform A protein.
Length = 199
Score = 91.5 bits (217), Expect = 9e-19
Identities = 35/46 (76%), Positives = 44/46 (95%)
Frame = +2
Query: 512 MERESNPMEALCRSGCGFYGNPSTDGLCSVCFKEALKKKQQPPATT 649
MERESNPM+ +CRSGCGFYGNP+TDGLCSVC+K++L+KKQQPP ++
Sbjct: 1 MERESNPMQPMCRSGCGFYGNPATDGLCSVCYKDSLRKKQQPPVSS 46
>AJ421016-1|CAD12856.1| 206|Drosophila melanogaster hypothetical
protein protein.
Length = 206
Score = 90.6 bits (215), Expect = 2e-18
Identities = 35/46 (76%), Positives = 43/46 (93%)
Frame = +2
Query: 512 MERESNPMEALCRSGCGFYGNPSTDGLCSVCFKEALKKKQQPPATT 649
MERESNPM+ +CRSGCGFYGNP+TDGLCSVC+K++L KKQQPP ++
Sbjct: 1 MERESNPMQPMCRSGCGFYGNPATDGLCSVCYKDSLSKKQQPPVSS 46
>AY058763-1|AAL13992.1| 696|Drosophila melanogaster SD03358p
protein.
Length = 696
Score = 53.2 bits (122), Expect = 3e-07
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2
Query: 545 CRSGCGFYGNPSTDGLCSVCFKEALKKKQQ 634
CRSGCGFYG P +GLCS+CF+E KQ+
Sbjct: 19 CRSGCGFYGTPQNEGLCSMCFREKFNDKQR 48
>AE014296-213|AAF47467.1| 696|Drosophila melanogaster CG9139-PA
protein.
Length = 696
Score = 53.2 bits (122), Expect = 3e-07
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2
Query: 545 CRSGCGFYGNPSTDGLCSVCFKEALKKKQQ 634
CRSGCGFYG P +GLCS+CF+E KQ+
Sbjct: 19 CRSGCGFYGTPQNEGLCSMCFREKFNDKQR 48
>AY061244-1|AAL28792.1| 664|Drosophila melanogaster LD18373p
protein.
Length = 664
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -2
Query: 308 VYDRYFCVRTFEGHTVV--EKESFEPNKCLSKCAVPSAHKQATPRLCGCSQHP 156
+Y FC RTF+ H + K+ PN + K + PS+ +T HP
Sbjct: 562 LYQCQFCTRTFKSHANMHNHKKKMHPNDWVRKYSQPSSSITSTAAPLAHPNHP 614
>AE014298-1641|AAF48061.1| 664|Drosophila melanogaster CG11696-PA
protein.
Length = 664
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -2
Query: 308 VYDRYFCVRTFEGHTVV--EKESFEPNKCLSKCAVPSAHKQATPRLCGCSQHP 156
+Y FC RTF+ H + K+ PN + K + PS+ +T HP
Sbjct: 562 LYQCQFCTRTFKSHANMHNHKKKMHPNDWVRKYSQPSSSITSTAAPLAHPNHP 614
>AF162681-1|AAD50777.1| 737|Drosophila melanogaster maroon-like
protein protein.
Length = 737
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 185 VSLVCELKGLRTWKDICLVRNSLFQQQCVLQ 277
+S+V L+G W+D C R +LF C+ +
Sbjct: 306 LSIVGLLEGFERWRDWCPERTTLFSNHCIFR 336
>AY118814-1|AAM50674.1| 448|Drosophila melanogaster GH23407p
protein.
Length = 448
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 518 RESNPMEALCRSGCGFYGNPSTDGLC 595
R EA+C GCGFYG +C
Sbjct: 340 RNRERCEAVCVGGCGFYGKCIAPNVC 365
>AY061576-1|AAL29124.1| 987|Drosophila melanogaster SD02803p
protein.
Length = 987
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 380 TNLLSNVGQVTSGLCSAQQFSLLVVYDRYFCVRTFEGHTVVEK 252
T LL + +C+ + FSLL+ + + +C F HT +EK
Sbjct: 373 TALLETKHTIQQAICATEYFSLLLDFFKQYCWNNFL-HTEMEK 414
>AE014134-2440|AAF53361.2| 448|Drosophila melanogaster CG33115-PA
protein.
Length = 448
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 518 RESNPMEALCRSGCGFYGNPSTDGLC 595
R EA+C GCGFYG +C
Sbjct: 340 RNRERCEAVCVGGCGFYGKCIAPNVC 365
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,464,212
Number of Sequences: 53049
Number of extensions: 559981
Number of successful extensions: 1228
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1224
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -