Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0411
         (422 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M64231-1|AAA60574.1|  302|Homo sapiens spermidine synthase protein.    40   0.005
M34338-1|AAA36633.1|  302|Homo sapiens spermidine synthase protein.    40   0.005
BC033106-1|AAH33106.1|  302|Homo sapiens spermidine synthase pro...    40   0.005
BC000309-1|AAH00309.1|  302|Homo sapiens spermidine synthase pro...    40   0.005
AL109811-6|CAI22104.1|  302|Homo sapiens spermidine synthase pro...    40   0.005
AB209417-1|BAD92654.1|  503|Homo sapiens zinc finger protein 519...    33   0.52 
BC024227-1|AAH24227.1|  540|Homo sapiens zinc finger protein 519...    32   0.69 

>M64231-1|AAA60574.1|  302|Homo sapiens spermidine synthase protein.
          Length = 302

 Score = 39.5 bits (88), Expect = 0.005
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +2

Query: 329 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKS 421
           ++  WF E+C +WPG   S +V+++LH  +S
Sbjct: 16  IREGWFRETCSLWPGQALSLQVEQLLHHRRS 46


>M34338-1|AAA36633.1|  302|Homo sapiens spermidine synthase protein.
          Length = 302

 Score = 39.5 bits (88), Expect = 0.005
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +2

Query: 329 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKS 421
           ++  WF E+C +WPG   S +V+++LH  +S
Sbjct: 16  IREGWFRETCSLWPGQALSLQVEQLLHHRRS 46


>BC033106-1|AAH33106.1|  302|Homo sapiens spermidine synthase
           protein.
          Length = 302

 Score = 39.5 bits (88), Expect = 0.005
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +2

Query: 329 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKS 421
           ++  WF E+C +WPG   S +V+++LH  +S
Sbjct: 16  IREGWFRETCSLWPGQALSLQVEQLLHHRRS 46


>BC000309-1|AAH00309.1|  302|Homo sapiens spermidine synthase
           protein.
          Length = 302

 Score = 39.5 bits (88), Expect = 0.005
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +2

Query: 329 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKS 421
           ++  WF E+C +WPG   S +V+++LH  +S
Sbjct: 16  IREGWFRETCSLWPGQALSLQVEQLLHHRRS 46


>AL109811-6|CAI22104.1|  302|Homo sapiens spermidine synthase
           protein.
          Length = 302

 Score = 39.5 bits (88), Expect = 0.005
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +2

Query: 329 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKS 421
           ++  WF E+C +WPG   S +V+++LH  +S
Sbjct: 16  IREGWFRETCSLWPGQALSLQVEQLLHHRRS 46


>AB209417-1|BAD92654.1|  503|Homo sapiens zinc finger protein 519
           variant protein.
          Length = 503

 Score = 32.7 bits (71), Expect = 0.52
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 216 CIPCSKYKNSFRPSYELNITELTFHNHDIYVQRYDSIH 103
           CIP +KY++ F  S   N  ++ F NHD  + ++ S H
Sbjct: 102 CIPMNKYQHKFLKSVFCNKNQINF-NHDSNISKHHSTH 138


>BC024227-1|AAH24227.1|  540|Homo sapiens zinc finger protein 519
           protein.
          Length = 540

 Score = 32.3 bits (70), Expect = 0.69
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 216 CIPCSKYKNSFRPSYELNITELTFHNHDIYVQRYDSIH 103
           CIP +KY++ F  S   N  ++ F NHD  + ++ S H
Sbjct: 139 CIPMNKYQHKFLKSVFCNKNQINF-NHDSDISKHHSTH 175


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,245,592
Number of Sequences: 237096
Number of extensions: 979519
Number of successful extensions: 1792
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1792
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3259265358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)