Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0411
         (422 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003549-1|AAO39553.1|  299|Drosophila melanogaster RE01362p pro...    50   1e-06
AE014297-991|AAF54417.1|  287|Drosophila melanogaster CG8327-PA,...    48   4e-06
AE014134-2514|AAF53406.2| 1025|Drosophila melanogaster CG12636-P...    30   1.5  

>BT003549-1|AAO39553.1|  299|Drosophila melanogaster RE01362p
           protein.
          Length = 299

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = +2

Query: 314 KNMDKLKTNWFTE-SCDMWPGGTFSFEVKEVLHTEKS 421
           K MD L   WF+E   D+WPG +FS +VKEV+H EKS
Sbjct: 11  KQMDSLNNGWFSELQADLWPGQSFSLKVKEVIHKEKS 47


>AE014297-991|AAF54417.1|  287|Drosophila melanogaster CG8327-PA,
           isoform A protein.
          Length = 287

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
 Frame = +2

Query: 320 MDKLKTNWFTE-SCDMWPGGTFSFEVKEVLHTEKS 421
           MD L   WF+E   D+WPG +FS +VKEV+H EKS
Sbjct: 1   MDSLNNGWFSELQADLWPGQSFSLKVKEVIHKEKS 35


>AE014134-2514|AAF53406.2| 1025|Drosophila melanogaster CG12636-PA
           protein.
          Length = 1025

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -3

Query: 177 SYELNITELTFHNHDIYVQRYDSIHM 100
           +Y++N+TE+T +  DI V+  D IH+
Sbjct: 403 AYQINVTEVTENTKDIQVKTIDHIHV 428


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,285,923
Number of Sequences: 53049
Number of extensions: 302899
Number of successful extensions: 525
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1292733852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)