Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0411
         (422 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   1.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   4.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          20   10.0 
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      20   10.0 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    20   10.0 
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    20   10.0 

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -1

Query: 185 FALLTNSTLLNSHFTITIYMSKDMIRYI*QTETLDNDLL 69
           +A+  N T +NS   I++  SK  I+   QTE  ++  L
Sbjct: 541 YAMKMNETYINSGNKISLATSKSFIKANSQTEVSNSKKL 579


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 181 PFLRTQHY*THISQSRYIC 125
           P   T+HY TH  +  Y C
Sbjct: 104 PARLTRHYRTHTGEKPYQC 122


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 11/42 (26%), Positives = 18/42 (42%)
 Frame = +1

Query: 265 FNFRLQLPTWY*LLKQEKHGQTKNQLVYGIMRYVAWGYFLIR 390
           +  R  LP W    +     + + QL Y + + +   YFL R
Sbjct: 235 YYMREMLPYWMSSSQYHMPKEIRGQLYYFLHKQLMTRYFLER 276


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 11/42 (26%), Positives = 18/42 (42%)
 Frame = +1

Query: 265 FNFRLQLPTWY*LLKQEKHGQTKNQLVYGIMRYVAWGYFLIR 390
           +  R  LP W    +     + + QL Y + + +   YFL R
Sbjct: 235 YYMREMLPYWMSSSQYHMPKEIRGQLYYFLHKQLMTRYFLER 276


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 11  GLILSVRDKGINHKKYI 61
           GL++S   K  NH+K I
Sbjct: 125 GLLISTGQKWRNHRKLI 141


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +3

Query: 357 AICGLGVLS 383
           A+CGLG+L+
Sbjct: 20  AVCGLGILT 28


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,999
Number of Sequences: 438
Number of extensions: 2171
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)