Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0409
(715 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25798| Best HMM Match : FA_desaturase (HMM E-Value=0) 130 1e-30
SB_42121| Best HMM Match : EGF_CA (HMM E-Value=8.7) 75 6e-14
SB_2286| Best HMM Match : Cu_bind_like (HMM E-Value=6.6) 30 2.1
SB_49228| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_45746| Best HMM Match : FA_desaturase (HMM E-Value=0) 29 2.8
SB_31018| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_1252| Best HMM Match : POPLD (HMM E-Value=1.9) 29 2.8
SB_12718| Best HMM Match : rve (HMM E-Value=0.0031) 29 3.7
SB_41005| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_36820| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_12139| Best HMM Match : Autotransporter (HMM E-Value=1.4) 29 4.9
SB_14471| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_3750| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_58932| Best HMM Match : POPLD (HMM E-Value=0.9) 28 8.6
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_43216| Best HMM Match : RSD-2 (HMM E-Value=2.3) 28 8.6
SB_29676| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_22139| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_9409| Best HMM Match : HLH (HMM E-Value=5.8e-17) 28 8.6
SB_4086| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_25798| Best HMM Match : FA_desaturase (HMM E-Value=0)
Length = 268
Score = 130 bits (314), Expect = 1e-30
Identities = 63/129 (48%), Positives = 81/129 (62%), Gaps = 1/129 (0%)
Frame = +1
Query: 34 ICFIIPTLAPMYFWGESLNNAWHIT-VLRYIFSLNGTFLVNSAAHLWGYKPYDKSLKATQ 210
+C +IPTL P WGESL NA+ + LRY+ +LN T+ VNS AH+WG KPYD ++ +
Sbjct: 130 MCVLIPTLVPS-LWGESLWNAYFTSFALRYVITLNVTWCVNSIAHMWGDKPYDVTINPAE 188
Query: 211 SGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNI 390
+ T GEG+HNYHH FP DY A E G R +N++TR ID +A MG D K
Sbjct: 189 NLFVTLATSGEGYHNYHHTFPQDYAASEFGTR-LNMSTRLIDMWAAMGLVSDRKVVPKET 247
Query: 391 IEKRALRTG 417
I KR +RTG
Sbjct: 248 IRKRMMRTG 256
>SB_42121| Best HMM Match : EGF_CA (HMM E-Value=8.7)
Length = 202
Score = 74.9 bits (176), Expect = 6e-14
Identities = 49/121 (40%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Frame = +1
Query: 34 ICFIIPTLAPMYFWGESLNNAWHIT-VLRYIFSLNGTFLVNSAAHLWGYKPYDKSLKATQ 210
+C +IPTL P WGESL NA+ + LRY+ +LN T+ VNS AH+WG KPYD ++
Sbjct: 10 MCVLIPTLVPS-LWGESLWNAYFTSFALRYVITLNVTWCVNSIAHMWGDKPYDVTI---N 65
Query: 211 SGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNI 390
G G DY A E G R +N++TR ID +A MG D K
Sbjct: 66 PGREPLRYLGN-----------DYAASEFGTR-LNMSTRLIDMWAAMGLVSDRKVVPKET 113
Query: 391 I 393
I
Sbjct: 114 I 114
>SB_2286| Best HMM Match : Cu_bind_like (HMM E-Value=6.6)
Length = 326
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +1
Query: 214 GMANAFTF--GEGFHNYHHVFPWDYRADE 294
G+ + F F GEG+HN H + +D ADE
Sbjct: 115 GLGDVFVFYPGEGYHNVHVIRGYDTAADE 143
>SB_49228| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +1
Query: 214 GMANAFTF--GEGFHNYHHVFPWDYRADELG 300
G+ + F F GEG+ N H + +D ADE+G
Sbjct: 208 GLGDVFVFYPGEGYRNVHVIRGYDTAADEVG 238
>SB_45746| Best HMM Match : FA_desaturase (HMM E-Value=0)
Length = 331
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 214 GMANAFTFGEGFHNYHHVFP 273
G N TF G+HN HH FP
Sbjct: 247 GPLNYLTFNVGYHNEHHDFP 266
>SB_31018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 169 WGYKPYDKSLKATQSGMANAFTF--GEGFHNYHHVFPWDYRADE 294
+G++P + G+ + F F GEG+ N H + +D ADE
Sbjct: 231 FGFRPDFRWKGGRNHGLGDVFVFYPGEGYRNVHVISGYDTAADE 274
>SB_1252| Best HMM Match : POPLD (HMM E-Value=1.9)
Length = 566
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 178 KPYDKSLKATQSGMANAFTF--GEGFHNYHHVFPWDYRADELGDRYINLTT 324
KP+ + G+ + F F GEG+ N H + +D ADE ++NL T
Sbjct: 439 KPHFRWKGGRNHGLGDVFVFYPGEGYRNVHVIRGYDTAADEY-PSHLNLFT 488
>SB_12718| Best HMM Match : rve (HMM E-Value=0.0031)
Length = 1667
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +1
Query: 193 SLKATQSGMANAFTF--GEGFHNYHHVFPWDYRADE 294
S+ G+++ F F GEG+ N H + +D ADE
Sbjct: 117 SMGGRNHGLSDVFVFYPGEGYRNVHVILGYDTAADE 152
>SB_41005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 568
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 264 VMVIVKSFTKSKCICHATLSSFQALIVRFVSPQMSSAIYK 145
V +I+ F K K + T+ + LI F+S SAIY+
Sbjct: 118 VAIIISGFEKVKILFAITMFLWFCLIYMFISAHWGSAIYR 157
>SB_36820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +1
Query: 214 GMANAFTF--GEGFHNYHHVFPWDYRADE 294
G+ N F F GEG+ N H + +D ADE
Sbjct: 65 GLGNVFVFYPGEGYRNVHVIRGYDTAADE 93
>SB_12139| Best HMM Match : Autotransporter (HMM E-Value=1.4)
Length = 751
Score = 28.7 bits (61), Expect = 4.9
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +1
Query: 61 PMY-FWGESLNNAWHITVLRYIFSLNGTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTF 237
P Y +W + LN A + +++ L L G P+ TQ G F
Sbjct: 60 PSYGYWPQQLNFAVWGFLRFHVYFTTRRILYELGVPLPGDSPF------TQKGDVFVFYP 113
Query: 238 GEGFHNYHHVFPWDYRADELGDRYINL 318
GEG+ N H + +D AD+ ++NL
Sbjct: 114 GEGYRNVHVIRGYDTAADKYSS-HLNL 139
>SB_14471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -2
Query: 291 VCPIIPRKNVMVIVKSFTKSKCICHATLSSFQALIVRFVSPQMSSAIYKKSAIET 127
V P+I NV+ + +++ CHA +S +L+ VS + ++ + AIET
Sbjct: 73 VVPLIVLSNVVAPMMEYSRGIRYCHAAISVTISLMFNSVSNLSAISLDRYLAIET 127
>SB_3750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +1
Query: 214 GMANAFTF--GEGFHNYHHVFPWDYRADELGDRY 309
G+ + F F GEG+ N H + +D ADE Y
Sbjct: 93 GLGDVFVFYPGEGYRNVHVIRGYDTAADEYPSHY 126
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 181 PY-DKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADE 294
PY D K Q G AF GEG+ N H + +D ADE
Sbjct: 181 PYSDTRDKLYQLGDVFAFYPGEGYRNVHVIRGYDTAADE 219
>SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +1
Query: 151 NSAAHLWGYKPYDKSLKATQSGMANAFTFGEGF-HNYHHVFPWDYRADELG--DRYINLT 321
N A W K D QSG+ + FG+G NY F + A E G D ++ +
Sbjct: 580 NKTAFKWFKKAADMGNPIGQSGLGLMYMFGKGVDKNYEKAFQYFKMAAEQGWVDGHLQIG 639
Query: 322 TRF 330
T +
Sbjct: 640 TMY 642
>SB_58932| Best HMM Match : POPLD (HMM E-Value=0.9)
Length = 499
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 214 GMANAFTF--GEGFHNYHHVFPWDYRADELGDRYINLTTRFID 336
G+ + F F GEG+ N H + +D ADE ++NL FID
Sbjct: 214 GLGDVFVFYPGEGYRNVHVIRGYDTAADEYSS-HLNL---FID 252
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -2
Query: 360 SPSH-PCKEIYEPCCQIYVPVPQFVCPIIPR 271
+PS PC E Y PC + Y+P + P R
Sbjct: 620 APSQSPCTERYTPCTERYIPCTERYTPCTER 650
>SB_43216| Best HMM Match : RSD-2 (HMM E-Value=2.3)
Length = 477
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +1
Query: 214 GMANAFTF--GEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYD 366
G+ + F F GEG+ N H + +D ADE ++NL F+ GW Y+
Sbjct: 62 GLGDVFVFYSGEGYRNVHVIRGYDTAADEY-PSHLNL-------FSDEGWTYN 106
>SB_29676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 214 GMANAFTF--GEGFHNYHHVFPWDYRADELGDRYINLTTRFID 336
G+ + F F GEG+ N H + +D ADE ++NL FID
Sbjct: 314 GLGDVFVFYPGEGYRNVHVIRGYDTAADEYSS-HLNL---FID 352
>SB_22139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1472
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 175 YKPYDKSLKATQSGMANAFTF--GEGFHNYHHVFPWDYRADELGDRYINL 318
+KP + G+ + F F GEG+ N H + +D ADE ++NL
Sbjct: 104 HKPDFRWKGGRNHGLGDVFVFYPGEGYRNVHVIRGYDTAADEYSS-HLNL 152
>SB_9409| Best HMM Match : HLH (HMM E-Value=5.8e-17)
Length = 362
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -2
Query: 354 SHPCKEIYEPCCQIYVPVPQFVCPIIPRKNVMVIVKSFTKSKCICHATLSSFQALI 187
+HP +++YE C PV + V + T+S C H++ S + LI
Sbjct: 126 THPSEDLYETPCSTPPPVEYISSDCVDPSTVFPYPMNDTQSFCSSHSSDSGKRMLI 181
>SB_4086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2235
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = +1
Query: 274 WDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTN----IIEKRALRTGDGTYKRPN 441
W +DELG ++L+ + +W+ + TAST+ I + LR P+
Sbjct: 842 WRLLSDELGSSMVSLSVATTPYSSWIHSVFSWMTASTSATDPIASLKPLRFATSCRTPPS 901
Query: 442 GMN 450
+N
Sbjct: 902 SLN 904
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,343,103
Number of Sequences: 59808
Number of extensions: 414311
Number of successful extensions: 1142
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1140
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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