Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0409
         (715 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein O-fucosylt...    24   5.4  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    24   5.4  
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         23   9.5  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   9.5  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     23   9.5  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     23   9.5  

>DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein
           O-fucosyltransferase 2 protein.
          Length = 451

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +3

Query: 570 LFLIFAGNFCIGFYCINLNLYIFLLVLSQILKLIIGYKRNITLSP 704
           L+L++  N   GF  +  ++YI L V  Q L+   GY+R   + P
Sbjct: 53  LYLLYDVNPSEGFN-LRRDVYIRLAVFVQFLRTQRGYRRTRLVLP 96


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 6/30 (20%), Positives = 15/30 (50%)
 Frame = +1

Query: 262 HVFPWDYRADELGDRYINLTTRFIDFFAWM 351
           ++ PW+ R  E+   + ++   +  F  W+
Sbjct: 130 YLIPWESRIKEIESHFGSVVASYFTFLRWL 159


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +1

Query: 247 FHNYHHVFPWDYRADELGDRYINLTTRFIDFFAW 348
           + NY   +P DY  +   + Y+N  T  I   A+
Sbjct: 201 YANYTATYPMDYYNNFYTEEYLNYNTEDIGLNAY 234


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 426  LQTTKWNELKQSSKSFFA*YHFF 494
            +  TKW +L    K +FA Y  F
Sbjct: 1736 IMQTKWTKLTSHLKEYFAFYENF 1758



 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 168  VGIQTLR*EPESYSKWHGK 224
            VG+  LR  P   SKW GK
Sbjct: 2929 VGVLFLRNLPRQISKWSGK 2947


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +1

Query: 247 FHNYHHVFPWDYRADELGDRYINLTTRFIDFFAW 348
           + NY   +P DY  +   + Y+N  T  I   A+
Sbjct: 201 YANYTATYPMDYYNNFYTEEYLNYNTEDIGLNAY 234


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +1

Query: 247 FHNYHHVFPWDYRADELGDRYINLTTRFIDFFAW 348
           + NY   +P DY  +   + Y+N  T  I   A+
Sbjct: 201 YANYTATYPMDYYNNFYTEEYLNYNTEDIGLNAY 234


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 724,714
Number of Sequences: 2352
Number of extensions: 16243
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)