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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0409
         (715 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC062303-1|AAH62303.1|  359|Homo sapiens stearoyl-CoA desaturase...   151   2e-36
AL139819-4|CAH72824.1|  359|Homo sapiens stearoyl-CoA desaturase...   151   2e-36
AF097514-1|AAD29870.1|  359|Homo sapiens stearoyl-CoA desaturase...   151   2e-36
AB208982-1|BAD92219.1|  366|Homo sapiens stearoyl-CoA desaturase...   151   2e-36
AB032261-1|BAA93510.1|  359|Homo sapiens stearoyl-CoA desaturase...   151   2e-36
Y13647-1|CAA73998.1|  359|Homo sapiens stearoyl CoA desaturase p...   149   1e-35
AL831891-1|CAD38567.1|  160|Homo sapiens hypothetical protein pr...   149   1e-35
AF389338-1|AAP31443.1|  330|Homo sapiens acyl-CoA-desaturase pro...   149   1e-35
BC048971-1|AAH48971.1|  134|Homo sapiens SCD5 protein protein.        149   1e-35
AK222862-1|BAD96582.1|  359|Homo sapiens stearoyl-CoA desaturase...   147   4e-35
BC005807-1|AAH05807.1|  355|Homo sapiens SCD protein protein.         146   5e-35
AL139819-3|CAH72823.1|  242|Homo sapiens stearoyl-CoA desaturase...    38   0.027
S70284-1|AAB30631.1|  237|Homo sapiens stearoyl-CoA desaturase p...    33   1.3  
BC000961-1|AAH00961.1|  323|Homo sapiens degenerative spermatocy...    31   4.1  
AY423730-1|AAS00493.1|  323|Homo sapiens migration-inducing gene...    31   4.1  
AF466375-1|AAM12531.1|  323|Homo sapiens sphingolipid delta 4 de...    31   4.1  
AF002668-1|AAB62238.1|  323|Homo sapiens MLD protein.                  31   4.1  
D79991-1|BAA11486.1| 1745|Homo sapiens KIAA0169 protein protein.       30   7.2  
BX537774-1|CAD97835.1| 1639|Homo sapiens hypothetical protein pr...    30   7.2  
BC111045-1|AAI11046.1|  974|Homo sapiens NUP188 protein protein.       30   7.2  
BC040352-1|AAH40352.1| 1293|Homo sapiens NUP188 protein protein.       30   7.2  
AL672142-10|CAI10845.1| 1749|Homo sapiens nucleoporin 188kDa pro...    30   7.2  
AL592211-4|CAI12368.1| 1749|Homo sapiens nucleoporin 188kDa prot...    30   7.2  

>BC062303-1|AAH62303.1|  359|Homo sapiens stearoyl-CoA desaturase
           (delta-9-desaturase) protein.
          Length = 359

 Score =  151 bits (367), Expect = 2e-36
 Identities = 74/143 (51%), Positives = 93/143 (65%), Gaps = 1/143 (0%)
 Frame = +1

Query: 7   KYAIPFIGTICFIIPTLAPMYFWGESLNNAWHI-TVLRYIFSLNGTFLVNSAAHLWGYKP 183
           +Y  P +  +CFI+PTL P YFWGE+  N+  + T LRY   LN T+LVNSAAHL+GY+P
Sbjct: 216 RYYKPGLLLMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAAHLFGYRP 275

Query: 184 YDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAY 363
           YDK++   ++ + +    GEGFHNYHH FP+DY A E    +IN TT FID  A +G AY
Sbjct: 276 YDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFTTFFIDCMAALGLAY 334

Query: 364 DLKTASTNIIEKRALRTGDGTYK 432
           D K  S   I  R  RTGDG YK
Sbjct: 335 DRKKVSKAAILARIKRTGDGNYK 357


>AL139819-4|CAH72824.1|  359|Homo sapiens stearoyl-CoA desaturase
           (delta-9-desaturase) protein.
          Length = 359

 Score =  151 bits (367), Expect = 2e-36
 Identities = 74/143 (51%), Positives = 93/143 (65%), Gaps = 1/143 (0%)
 Frame = +1

Query: 7   KYAIPFIGTICFIIPTLAPMYFWGESLNNAWHI-TVLRYIFSLNGTFLVNSAAHLWGYKP 183
           +Y  P +  +CFI+PTL P YFWGE+  N+  + T LRY   LN T+LVNSAAHL+GY+P
Sbjct: 216 RYYKPGLLMMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAAHLFGYRP 275

Query: 184 YDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAY 363
           YDK++   ++ + +    GEGFHNYHH FP+DY A E    +IN TT FID  A +G AY
Sbjct: 276 YDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFTTFFIDCMAALGLAY 334

Query: 364 DLKTASTNIIEKRALRTGDGTYK 432
           D K  S   I  R  RTGDG YK
Sbjct: 335 DRKKVSKAAILARIKRTGDGNYK 357


>AF097514-1|AAD29870.1|  359|Homo sapiens stearoyl-CoA desaturase
           protein.
          Length = 359

 Score =  151 bits (367), Expect = 2e-36
 Identities = 74/143 (51%), Positives = 93/143 (65%), Gaps = 1/143 (0%)
 Frame = +1

Query: 7   KYAIPFIGTICFIIPTLAPMYFWGESLNNAWHI-TVLRYIFSLNGTFLVNSAAHLWGYKP 183
           +Y  P +  +CFI+PTL P YFWGE+  N+  + T LRY   LN T+LVNSAAHL+GY+P
Sbjct: 216 RYYKPGLLLMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAAHLFGYRP 275

Query: 184 YDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAY 363
           YDK++   ++ + +    GEGFHNYHH FP+DY A E    +IN TT FID  A +G AY
Sbjct: 276 YDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFTTFFIDCMAALGLAY 334

Query: 364 DLKTASTNIIEKRALRTGDGTYK 432
           D K  S   I  R  RTGDG YK
Sbjct: 335 DRKKVSKAAILARIKRTGDGNYK 357


>AB208982-1|BAD92219.1|  366|Homo sapiens stearoyl-CoA desaturase
           variant protein.
          Length = 366

 Score =  151 bits (367), Expect = 2e-36
 Identities = 74/143 (51%), Positives = 93/143 (65%), Gaps = 1/143 (0%)
 Frame = +1

Query: 7   KYAIPFIGTICFIIPTLAPMYFWGESLNNAWHI-TVLRYIFSLNGTFLVNSAAHLWGYKP 183
           +Y  P +  +CFI+PTL P YFWGE+  N+  + T LRY   LN T+LVNSAAHL+GY+P
Sbjct: 223 RYYKPGLLLMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAAHLFGYRP 282

Query: 184 YDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAY 363
           YDK++   ++ + +    GEGFHNYHH FP+DY A E    +IN TT FID  A +G AY
Sbjct: 283 YDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFTTFFIDCMAALGLAY 341

Query: 364 DLKTASTNIIEKRALRTGDGTYK 432
           D K  S   I  R  RTGDG YK
Sbjct: 342 DRKKVSKAAILARIKRTGDGNYK 364


>AB032261-1|BAA93510.1|  359|Homo sapiens stearoyl-CoA desaturase
           protein.
          Length = 359

 Score =  151 bits (367), Expect = 2e-36
 Identities = 74/143 (51%), Positives = 93/143 (65%), Gaps = 1/143 (0%)
 Frame = +1

Query: 7   KYAIPFIGTICFIIPTLAPMYFWGESLNNAWHI-TVLRYIFSLNGTFLVNSAAHLWGYKP 183
           +Y  P +  +CFI+PTL P YFWGE+  N+  + T LRY   LN T+LVNSAAHL+GY+P
Sbjct: 216 RYYKPGLLLMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAAHLFGYRP 275

Query: 184 YDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAY 363
           YDK++   ++ + +    GEGFHNYHH FP+DY A E    +IN TT FID  A +G AY
Sbjct: 276 YDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFTTFFIDCMAALGLAY 334

Query: 364 DLKTASTNIIEKRALRTGDGTYK 432
           D K  S   I  R  RTGDG YK
Sbjct: 335 DRKKVSKAAILARIKRTGDGNYK 357


>Y13647-1|CAA73998.1|  359|Homo sapiens stearoyl CoA desaturase
           protein.
          Length = 359

 Score =  149 bits (361), Expect = 1e-35
 Identities = 72/143 (50%), Positives = 92/143 (64%), Gaps = 1/143 (0%)
 Frame = +1

Query: 7   KYAIPFIGTICFIIPTLAPMYFWGESLNNAWHI-TVLRYIFSLNGTFLVNSAAHLWGYKP 183
           +Y  P +  +CFI+PTL P YFWGE+  N+  + T LRY   LN T+LVNSAAHL+GY+P
Sbjct: 216 RYYKPGLLMMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAAHLFGYRP 275

Query: 184 YDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAY 363
           YDK++   ++ + +    GEGFHNYHH FP+DY A E    +IN  T FID+ A +G  Y
Sbjct: 276 YDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFNTFFIDWMAALGLTY 334

Query: 364 DLKTASTNIIEKRALRTGDGTYK 432
           D K  S   I  R  RTGDG YK
Sbjct: 335 DRKKVSKAAILARIKRTGDGNYK 357


>AL831891-1|CAD38567.1|  160|Homo sapiens hypothetical protein
           protein.
          Length = 160

 Score =  149 bits (361), Expect = 1e-35
 Identities = 70/141 (49%), Positives = 93/141 (65%), Gaps = 1/141 (0%)
 Frame = +1

Query: 7   KYAIPFIGTICFIIPTLAPMYFWGESLNNAWHI-TVLRYIFSLNGTFLVNSAAHLWGYKP 183
           KY    +  +CF++PTL P Y WGESL N++ + ++LRY  SLN ++LVNSAAH++G +P
Sbjct: 20  KYYKISVVLMCFVVPTLVPWYIWGESLWNSYFLASILRYTISLNISWLVNSAAHMYGNRP 79

Query: 184 YDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAY 363
           YDK +   Q+ +      GEGFHNYHH FP+DY A E G  + N TT FIDF  W+G A 
Sbjct: 80  YDKHISPRQNPLVALGAIGEGFHNYHHTFPFDYSASEFGLNF-NPTTWFIDFMCWLGLAT 138

Query: 364 DLKTASTNIIEKRALRTGDGT 426
           D K A+  +IE R  RTGD +
Sbjct: 139 DRKRATKPMIEARKARTGDSS 159


>AF389338-1|AAP31443.1|  330|Homo sapiens acyl-CoA-desaturase
           protein.
          Length = 330

 Score =  149 bits (361), Expect = 1e-35
 Identities = 70/141 (49%), Positives = 93/141 (65%), Gaps = 1/141 (0%)
 Frame = +1

Query: 7   KYAIPFIGTICFIIPTLAPMYFWGESLNNAWHI-TVLRYIFSLNGTFLVNSAAHLWGYKP 183
           KY    +  +CF++PTL P Y WGESL N++ + ++LRY  SLN ++LVNSAAH++G +P
Sbjct: 190 KYYKISVVLMCFVVPTLVPWYIWGESLWNSYFLASILRYTISLNISWLVNSAAHMYGNRP 249

Query: 184 YDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAY 363
           YDK +   Q+ +      GEGFHNYHH FP+DY A E G  + N TT FIDF  W+G A 
Sbjct: 250 YDKHISPRQNPLVALGAIGEGFHNYHHTFPFDYSASEFGLNF-NPTTWFIDFMCWLGLAT 308

Query: 364 DLKTASTNIIEKRALRTGDGT 426
           D K A+  +IE R  RTGD +
Sbjct: 309 DRKRATKPMIEARKARTGDSS 329


>BC048971-1|AAH48971.1|  134|Homo sapiens SCD5 protein protein.
          Length = 134

 Score =  149 bits (360), Expect = 1e-35
 Identities = 68/132 (51%), Positives = 90/132 (68%), Gaps = 1/132 (0%)
 Frame = +1

Query: 34  ICFIIPTLAPMYFWGESLNNAWHI-TVLRYIFSLNGTFLVNSAAHLWGYKPYDKSLKATQ 210
           +CF++PTL P Y WGESL N++ + ++LRY  SLN ++LVNSAAH++G +PYDK +   Q
Sbjct: 3   MCFVVPTLVPWYIWGESLWNSYFLASILRYTISLNISWLVNSAAHMYGNRPYDKHISPRQ 62

Query: 211 SGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNI 390
           + +      GEGFHNYHH FP+DY A E G  + N TT FIDF  W+G A D K A+  +
Sbjct: 63  NPLVALGAIGEGFHNYHHTFPFDYSASEFGLNF-NPTTWFIDFMCWLGLATDRKRATKPM 121

Query: 391 IEKRALRTGDGT 426
           IE R  RTGD +
Sbjct: 122 IEARKARTGDSS 133


>AK222862-1|BAD96582.1|  359|Homo sapiens stearoyl-CoA desaturase
           variant protein.
          Length = 359

 Score =  147 bits (356), Expect = 4e-35
 Identities = 73/143 (51%), Positives = 92/143 (64%), Gaps = 1/143 (0%)
 Frame = +1

Query: 7   KYAIPFIGTICFIIPTLAPMYFWGESLNNAWHI-TVLRYIFSLNGTFLVNSAAHLWGYKP 183
           +Y  P +  +CFI+PTL P YFWGE+  N+  + T LRY   LN T+LVNSAA L+GY+P
Sbjct: 216 RYYKPGLLMMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAALLFGYRP 275

Query: 184 YDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAY 363
           YDK++   ++ + +    GEGFHNYHH FP+DY A E    +IN TT FID  A +G AY
Sbjct: 276 YDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFTTFFIDCMAALGLAY 334

Query: 364 DLKTASTNIIEKRALRTGDGTYK 432
           D K  S   I  R  RTGDG YK
Sbjct: 335 DRKKVSKAAILARIKRTGDGNYK 357


>BC005807-1|AAH05807.1|  355|Homo sapiens SCD protein protein.
          Length = 355

 Score =  146 bits (355), Expect = 5e-35
 Identities = 72/140 (51%), Positives = 91/140 (65%), Gaps = 1/140 (0%)
 Frame = +1

Query: 7   KYAIPFIGTICFIIPTLAPMYFWGESLNNAWHI-TVLRYIFSLNGTFLVNSAAHLWGYKP 183
           +Y  P +  +CFI+PTL P YFWGE+  N+  + T LRY   LN T+LVNSAAHL+GY+P
Sbjct: 216 RYYKPGLLMMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAAHLFGYRP 275

Query: 184 YDKSLKATQSGMANAFTFGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAY 363
           YDK++   ++ + +    GEGFHNYHH FP+DY A E    +IN TT FID  A +G AY
Sbjct: 276 YDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFTTFFIDCMAALGLAY 334

Query: 364 DLKTASTNIIEKRALRTGDG 423
           D K  S   I  R  RTGDG
Sbjct: 335 DRKKVSKAAILARIKRTGDG 354


>AL139819-3|CAH72823.1|  242|Homo sapiens stearoyl-CoA desaturase
           (delta-9-desaturase) protein.
          Length = 242

 Score = 38.3 bits (85), Expect = 0.027
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +1

Query: 7   KYAIPFIGTICFIIPTLAPMYFWGES 84
           +Y  P +  +CFI+PTL P YFWGE+
Sbjct: 216 RYYKPGLLMMCFILPTLVPWYFWGET 241


>S70284-1|AAB30631.1|  237|Homo sapiens stearoyl-CoA desaturase
           protein.
          Length = 237

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 7   KYAIPFIGTICFIIPTLAPMYFWG 78
           +Y  P +  +CFI+PTL P Y WG
Sbjct: 214 RYYKPGLLMMCFILPTLVPWYCWG 237


>BC000961-1|AAH00961.1|  323|Homo sapiens degenerative spermatocyte
           homolog 1, lipid desaturase (Drosophila) protein.
          Length = 323

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +1

Query: 130 LNGTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFP 273
           ++G F+      L G++ Y      +  G  N  TF  G+HN HH FP
Sbjct: 225 ISGHFIAEHYMFLKGHETY------SYYGPLNLLTFNVGYHNEHHDFP 266


>AY423730-1|AAS00493.1|  323|Homo sapiens migration-inducing gene 15
           protein protein.
          Length = 323

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +1

Query: 130 LNGTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFP 273
           ++G F+      L G++ Y      +  G  N  TF  G+HN HH FP
Sbjct: 225 ISGHFIAEHYMFLKGHETY------SYYGPLNLLTFNVGYHNEHHDFP 266


>AF466375-1|AAM12531.1|  323|Homo sapiens sphingolipid delta 4
           desaturase protein DES1 protein.
          Length = 323

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +1

Query: 130 LNGTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFP 273
           ++G F+      L G++ Y      +  G  N  TF  G+HN HH FP
Sbjct: 225 ISGHFIAEHYMFLKGHETY------SYYGPLNLLTFNVGYHNEHHDFP 266


>AF002668-1|AAB62238.1|  323|Homo sapiens MLD protein.
          Length = 323

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +1

Query: 130 LNGTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFP 273
           ++G F+      L G++ Y      +  G  N  TF  G+HN HH FP
Sbjct: 225 ISGHFIAEHYMFLKGHETY------SYYGPLNLLTFNVGYHNEHHDFP 266


>D79991-1|BAA11486.1| 1745|Homo sapiens KIAA0169 protein protein.
          Length = 1745

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +3

Query: 426  LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 563
            L T ++  LK  SK+  A  HF  D C+++  Q+  ++ YN  + L
Sbjct: 1543 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1588


>BX537774-1|CAD97835.1| 1639|Homo sapiens hypothetical protein
            protein.
          Length = 1639

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +3

Query: 426  LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 563
            L T ++  LK  SK+  A  HF  D C+++  Q+  ++ YN  + L
Sbjct: 1437 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1482


>BC111045-1|AAI11046.1|  974|Homo sapiens NUP188 protein protein.
          Length = 974

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +3

Query: 426 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 563
           L T ++  LK  SK+  A  HF  D C+++  Q+  ++ YN  + L
Sbjct: 772 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 817


>BC040352-1|AAH40352.1| 1293|Homo sapiens NUP188 protein protein.
          Length = 1293

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +3

Query: 426  LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 563
            L T ++  LK  SK+  A  HF  D C+++  Q+  ++ YN  + L
Sbjct: 1091 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1136


>AL672142-10|CAI10845.1| 1749|Homo sapiens nucleoporin 188kDa protein.
          Length = 1749

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +3

Query: 426  LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 563
            L T ++  LK  SK+  A  HF  D C+++  Q+  ++ YN  + L
Sbjct: 1547 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1592


>AL592211-4|CAI12368.1| 1749|Homo sapiens nucleoporin 188kDa protein.
          Length = 1749

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +3

Query: 426  LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 563
            L T ++  LK  SK+  A  HF  D C+++  Q+  ++ YN  + L
Sbjct: 1547 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1592


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,645,391
Number of Sequences: 237096
Number of extensions: 2123416
Number of successful extensions: 3116
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3094
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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