Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0408
(571 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 1e-12
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 8e-12
SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 3e-11
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012) 46 2e-05
SB_46811| Best HMM Match : Ferritin (HMM E-Value=0.0021) 42 3e-04
SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_44028| Best HMM Match : RVT_1 (HMM E-Value=1.3) 35 0.054
SB_41870| Best HMM Match : DUF963 (HMM E-Value=0.22) 33 0.22
SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40) 31 0.66
SB_25615| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-10) 31 0.66
SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 31 0.66
SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 31 0.88
SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053) 30 1.2
SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1) 29 3.5
SB_36849| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_33125| Best HMM Match : Pkinase (HMM E-Value=0) 28 4.7
SB_32938| Best HMM Match : DUF204 (HMM E-Value=0.6) 28 4.7
SB_57416| Best HMM Match : rve (HMM E-Value=0.0011) 28 6.2
SB_6162| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_53292| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_17318| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042) 27 8.2
>SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 70.1 bits (164), Expect = 1e-12
Identities = 40/107 (37%), Positives = 56/107 (52%)
Frame = +3
Query: 225 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 404
+ KQI E+ AS Y++M +F D V PGF K F +A+ EEREHA KL + L RG
Sbjct: 150 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFMEASHEEREHAEKLAKFQLQRG-- 207
Query: 405 TGSVTDLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCE 545
G + L + P W G ++ AL LE V ++ ++ K E
Sbjct: 208 -GRIV-LQDIKRPERDDWGCGQDVIQAALDLEKHVNQALHDLHKVAE 252
>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 69.7 bits (163), Expect = 2e-12
Identities = 41/107 (38%), Positives = 56/107 (52%)
Frame = +3
Query: 225 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 404
+ KQI E+ AS Y++M +F D V PGF K F A+ EEREHA KL + L RG
Sbjct: 135 VNKQINLELYASYVYMSMAYHFDRDDVALPGFHKYFMKASHEEREHAEKLAKFQLQRG-- 192
Query: 405 TGSVTDLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCE 545
G + L + P W G A++ AL LE V ++ ++ K E
Sbjct: 193 -GRIV-LQDIKRPERDDWGCGQDAIQAALDLEKHVNQALLDLHKVAE 237
>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 67.3 bits (157), Expect = 8e-12
Identities = 41/113 (36%), Positives = 58/113 (51%)
Frame = +3
Query: 207 QTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYL 386
+ C + KQI E+ AS YL+M +F D V PGF K F A+ EEREHA KL+ +
Sbjct: 197 EECEAGINKQINLELYASYAYLSMAFHFDRDDVALPGFHKYFLKASHEEREHAEKLMKFQ 256
Query: 387 LMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCE 545
RG G + L + P W G +++ AL LE V ++ ++ K E
Sbjct: 257 NERG---GRIV-LQDIKKPEKDEWGCGMDSIQVALDLEKHVNQALLDLHKIAE 305
Score = 48.0 bits (109), Expect = 5e-06
Identities = 28/90 (31%), Positives = 47/90 (52%)
Frame = +3
Query: 282 AYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWE 461
A+F D ++ PGFA F AA EE HA +++L RG G V L P W
Sbjct: 2 AHFGRDDIHLPGFAAFFKKAAEEEYTHAHMFMEFLNKRG---GRV-KLHHIMKPCRDHWG 57
Query: 462 SGASALEHALKLESDVTNSIREVIKTCESS 551
+G A+ AL LE ++ +++ ++ + +++
Sbjct: 58 NGLMAMRDALYLEKEINHALLDLHQVADTN 87
>SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 65.3 bits (152), Expect = 3e-11
Identities = 39/96 (40%), Positives = 51/96 (53%)
Frame = +3
Query: 225 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 404
+ KQI E+ AS Y++M +F D V PGF K F A+ EEREHA KL + L RG
Sbjct: 18 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFIKASHEEREHAEKLAKFQLQRG-- 75
Query: 405 TGSVTDLITYRAPANTSWESGASALEHALKLESDVT 512
G + L + P W G A++ AL LE+ T
Sbjct: 76 -GRIV-LQDIKRPERDDWGCGQDAIQAALDLENTST 109
>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 54.0 bits (124), Expect = 8e-08
Identities = 39/115 (33%), Positives = 51/115 (44%)
Frame = +3
Query: 207 QTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYL 386
+ C + KQI E+ AS Y +M YF + V+ PGF K F A EEREHA K
Sbjct: 10 EECEAGINKQINLELYASYVYTSMACYFDREDVHLPGFHKFFKKQAHEEREHAEK----- 64
Query: 387 LMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCESS 551
P W SG A++ AL LE V ++ E+ KT E +
Sbjct: 65 -----------------KPERDEWGSGLEAMQTALDLEKHVNQALIELEKTAEKN 102
>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
Length = 126
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +3
Query: 225 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHA 365
+ KQI +E+ A YL+M +F D +N PGF K F A+ EE EHA
Sbjct: 38 INKQINKELYAHYTYLSMAFHFDRDDINLPGFNKFFKKASKEEWEHA 84
>SB_46811| Best HMM Match : Ferritin (HMM E-Value=0.0021)
Length = 73
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +3
Query: 339 AATEEREHATKLIDYLLMRGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVTNS 518
A+ EEREHA KL + L RG G + L + P W G A++ AL LE V +
Sbjct: 3 ASHEEREHAEKLAKFQLQRG---GRIV-LQDIKRPERDDWGCGQDAIQAALDLEKHVNQA 58
Query: 519 IREVIKTCE 545
+ ++ K E
Sbjct: 59 LHDLHKVAE 67
>SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 37.5 bits (83), Expect = 0.008
Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 18/110 (16%)
Frame = +3
Query: 285 YFSIDTVNRPGFAKLFFDAATEEREHA---------TK-----LIDYLLMR--GKLT--G 410
+F D +N PGF K F A+ EE EHA TK I +LL + LT G
Sbjct: 32 HFDRDDINLPGFNKFFKKASKEEWEHAQMVKTAALQTKCYRKLTIVWLLFQFMAYLTKRG 91
Query: 411 SVTDLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCESSFND 560
L P W +G A+E AL LE ++ +S++ + + + ND
Sbjct: 92 GRVKLNDIPTPCRDQWGNGLMAMEDALALEKEILSSLQALHRKAQEE-ND 140
>SB_44028| Best HMM Match : RVT_1 (HMM E-Value=1.3)
Length = 249
Score = 34.7 bits (76), Expect = 0.054
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +3
Query: 285 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLI 428
+F++ +N+PG ++ FDAA+E + T L YLL T S+T ++
Sbjct: 30 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKYLLHGPDCTNSLTGVL 75
>SB_41870| Best HMM Match : DUF963 (HMM E-Value=0.22)
Length = 233
Score = 32.7 bits (71), Expect = 0.22
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Frame = -1
Query: 538 VLMTSRMLLVTSLSSLRACSRADAPLSHDVFAGALYVM---RSV--TEPVSFPL---MSR 383
VL TSR +L TS S L A SR+ S V A + Y++ RSV T SF +
Sbjct: 144 VLATSRSVLATSRSVL-ATSRSVLATSRSVLATSRYILATSRSVLATGRSSFATSRYILA 202
Query: 382 *SMSLVACSRSSVAASKNSFA 320
S S++A SRS +A ++SFA
Sbjct: 203 TSRSVLATSRSVLATGRSSFA 223
>SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1379
Score = 31.1 bits (67), Expect = 0.66
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 285 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLI 428
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 350 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 395
>SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40)
Length = 1740
Score = 31.1 bits (67), Expect = 0.66
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 285 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLI 428
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 868 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 913
>SB_25615| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-10)
Length = 475
Score = 31.1 bits (67), Expect = 0.66
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 285 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLI 428
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 151 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 196
>SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1244
Score = 31.1 bits (67), Expect = 0.66
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 285 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLI 428
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 667 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 712
>SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1515
Score = 31.1 bits (67), Expect = 0.66
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 285 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLI 428
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 945 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 990
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 30.7 bits (66), Expect = 0.88
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 459 ESGASALEHALKLESDVTNSIREVIKTCESSFNDY 563
ES A+ LEH L+ E++ N +R+ T SS N+Y
Sbjct: 1823 ESKAADLEHRLETEANDKNKLRQENITLASSLNEY 1857
>SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053)
Length = 1152
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +2
Query: 173 RHHQG*VAHHGADLLQHDEETDPGGSG 253
RHHQ AHHG L+HD E D GSG
Sbjct: 811 RHHQH-GAHHG---LKHDTENDASGSG 833
>SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1283
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = +2
Query: 404 DRL-RNRPHHVQGPRKHVVGERRISPRARP---QAGE*RHQQHPGGHQDL 541
DRL +RP + G +H+ R P P G HQ HP GHQ +
Sbjct: 951 DRLTHDRPGLIMGQDRHMADYRE--PHREPGGVHEGPFPHQPHPNGHQPM 998
>SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1)
Length = 682
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = +2
Query: 404 DRL-RNRPHHVQGPRKHVVGERRISPRARP---QAGE*RHQQHPGGHQDL 541
DRL +RP + G +H+ R P P G HQ HP GHQ +
Sbjct: 84 DRLTHDRPGLIMGQDRHMADYRE--PHREPGGVHEGPFPHQPHPNGHQPM 131
>SB_36849| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 221 VVASLLHGEPLIPDGDGADVTLCSCGRS*GSNESEDSKENSPH 93
V+A LL G+P+ P G D L + G+ E KE +PH
Sbjct: 252 VLAELLLGQPIFPGDSGVD-QLVEIIKVLGTPTREQIKEMNPH 293
>SB_33125| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 937
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 424 SSRTGPPQTRRGRAAHQPSSTPSS 495
++RTGPPQ+R+ H+ S+T S
Sbjct: 419 ANRTGPPQSRQAVPRHRTSATADS 442
>SB_32938| Best HMM Match : DUF204 (HMM E-Value=0.6)
Length = 433
Score = 28.3 bits (60), Expect = 4.7
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 11/97 (11%)
Frame = +3
Query: 261 IQYLAMG--AYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGK--LTGSVTDLI 428
I +LA G AYF +D RPG A + + +L+ Y L R + L G + D
Sbjct: 193 IVWLASGRVAYFFLDYSKRPGIAAIVIVGGCFVVQPLIQLMHYGLYRARIWLQGVLLDGT 252
Query: 429 TYRA---PANTSWESGASAL----EHALKLESDVTNS 518
+ R NT++ +G A E A K +T S
Sbjct: 253 SVRGGGEGVNTAYSNGRDAFRRTEERAFKTSLSLTRS 289
>SB_57416| Best HMM Match : rve (HMM E-Value=0.0011)
Length = 807
Score = 27.9 bits (59), Expect = 6.2
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +3
Query: 285 YFSIDTVNRPGFAKLFFDAATEEREHA 365
+F + + N+PG ++ FDAA + R ++
Sbjct: 138 HFGVTSANKPGCVRIVFDAAAKTRTNS 164
>SB_6162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1808
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 131 SNESEDSKENSPHLNFSYNHRFFDDT 54
+ ES KEN PH + N R +D+T
Sbjct: 413 AEESTSDKENVPHCSHGNNERCYDNT 438
>SB_53292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 659
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/99 (20%), Positives = 42/99 (42%)
Frame = +3
Query: 228 RKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLT 407
RK +EE+ Q + N+PG ++ FDAA E + L LL +T
Sbjct: 39 RKLTEEELRTESQTTWFLPTHPVQNPNKPGKLRIVFDAAAEFQ--GISLNKALLSGPDVT 96
Query: 408 GSVTDLITYRAPANTSWESGASALEHALKLESDVTNSIR 524
++ ++ N + A+ H +++ + ++++
Sbjct: 97 NNLVAVLLQFCQGNIGIAADVEAMFHQIRVRKEDQDALQ 135
>SB_17318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 27.9 bits (59), Expect = 6.2
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3
Query: 426 ITYRAPANTSWESGASALEHALKLESD 506
+TY + +W SG L H++K++ D
Sbjct: 164 VTYHCLNSAAWSSGKGDLNHSIKIKGD 190
>SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042)
Length = 792
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 224 DEETDPGGSGRVNPVLSHGGLLLDRYGEP 310
D DPGG R++ + HGG +DR G P
Sbjct: 226 DRPMDPGGP-RMDHPMGHGGPPMDRGGPP 253
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,776,125
Number of Sequences: 59808
Number of extensions: 323157
Number of successful extensions: 889
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1349364063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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