Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0404
         (575 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   4.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.9  

>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 79  DLNLCSKVNFITDNGRDDG 135
           D NLC+ VN+      DDG
Sbjct: 46  DANLCTHVNYAFLGLNDDG 64


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 170 IVHMVAVIPFYFPSSRPLS 114
           ++ ++  I F FP S PLS
Sbjct: 524 VISLIDEISFTFPPSPPLS 542


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -1

Query: 473 YTISCNTERNTRNSIQLKYRELPI*CVFCYL 381
           YTI+ N + + RN      + + + C F YL
Sbjct: 123 YTINYNFKESERNDYVSLLQLVFVFCYFIYL 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,819
Number of Sequences: 336
Number of extensions: 2699
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)