Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0403
         (670 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022600-1|AAY55016.1|  540|Drosophila melanogaster IP11950p pro...    28   10.0 
BT022464-1|AAY54880.1|  487|Drosophila melanogaster IP11750p pro...    28   10.0 
AE014297-3087|AAF55948.1|  547|Drosophila melanogaster CG13409-P...    28   10.0 

>BT022600-1|AAY55016.1|  540|Drosophila melanogaster IP11950p
           protein.
          Length = 540

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -2

Query: 327 YTSLQPIETNHIRFVLNKLMKILPI*LCSLM 235
           Y  L+  E + +RF L K++ +LPI LC+++
Sbjct: 327 YHGLRQNERSFVRFYLVKVIVVLPIWLCAIV 357


>BT022464-1|AAY54880.1|  487|Drosophila melanogaster IP11750p
           protein.
          Length = 487

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -2

Query: 327 YTSLQPIETNHIRFVLNKLMKILPI*LCSLM 235
           Y  L+  E + +RF L K++ +LPI LC+++
Sbjct: 274 YHGLRQNERSFVRFYLVKVIVVLPIWLCAIV 304


>AE014297-3087|AAF55948.1|  547|Drosophila melanogaster CG13409-PA
           protein.
          Length = 547

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -2

Query: 327 YTSLQPIETNHIRFVLNKLMKILPI*LCSLM 235
           Y  L+  E + +RF L K++ +LPI LC+++
Sbjct: 334 YHGLRQNERSFVRFYLVKVIVVLPIWLCAIV 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,464,647
Number of Sequences: 53049
Number of extensions: 397321
Number of successful extensions: 498
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)