Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0402
(683 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110537-1|AAI10538.1| 819|Homo sapiens IWS1 homolog (S. cerevi... 36 0.10
BC110536-1|AAI10537.1| 819|Homo sapiens IWS1 homolog (S. cerevi... 36 0.10
BC065279-1|AAH65279.1| 375|Homo sapiens IWS1 protein protein. 36 0.10
AK027561-1|BAB55198.1| 819|Homo sapiens protein ( Homo sapiens ... 36 0.10
X64037-1|CAA45408.1| 517|Homo sapiens RNA polymerase II associa... 35 0.23
X64002-1|CAA45404.1| 517|Homo sapiens RAP74 protein. 35 0.23
CR456798-1|CAG33079.1| 517|Homo sapiens GTF2F1 protein. 35 0.23
BT007097-1|AAP35761.1| 517|Homo sapiens general transcription f... 35 0.23
BC013007-1|AAH13007.1| 517|Homo sapiens general transcription f... 35 0.23
BC000120-1|AAH00120.1| 517|Homo sapiens general transcription f... 35 0.23
X15949-1|CAA34073.1| 349|Homo sapiens protein ( Human mRNA for ... 33 0.72
CR457077-1|CAG33358.1| 349|Homo sapiens IRF2 protein. 33 0.72
BT007264-1|AAP35928.1| 349|Homo sapiens interferon regulatory f... 33 0.72
BC015803-1|AAH15803.1| 349|Homo sapiens interferon regulatory f... 33 0.72
U94319-1|AAB52589.1| 351|Homo sapiens DFS70 protein. 30 6.7
AJ640137-1|CAG26691.1| 2697|Homo sapiens delangin protein. 30 8.8
AJ627032-1|CAF25290.1| 2804|Homo sapiens delangin protein. 30 8.8
AB019602-1|BAA77349.1| 2158|Homo sapiens IDN3-B protein. 30 8.8
AB019494-1|BAA77335.1| 2265|Homo sapiens IDN3 protein. 30 8.8
>BC110537-1|AAI10538.1| 819|Homo sapiens IWS1 homolog (S.
cerevisiae) protein.
Length = 819
Score = 36.3 bits (80), Expect = 0.10
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Frame = +1
Query: 448 PKPDCQIDIQEESNQSDSNKEDSQEQALDIKPSMEP--EKATNQVSLESDNYSISDVNS- 618
P D +I+ ++S SDS ED+ + + S EP +A++ + E +SD S
Sbjct: 155 PASDSEIEELQKSPASDSETEDALKPQISDSESEEPPRHQASDSENEEPPKPRMSDSESE 214
Query: 619 ELPQPKVLNA-NEEPEIEKKDD 681
ELP+P+V ++ +EEP + D
Sbjct: 215 ELPKPQVSDSESEEPPRHQASD 236
>BC110536-1|AAI10537.1| 819|Homo sapiens IWS1 homolog (S.
cerevisiae) protein.
Length = 819
Score = 36.3 bits (80), Expect = 0.10
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Frame = +1
Query: 448 PKPDCQIDIQEESNQSDSNKEDSQEQALDIKPSMEP--EKATNQVSLESDNYSISDVNS- 618
P D +I+ ++S SDS ED+ + + S EP +A++ + E +SD S
Sbjct: 155 PASDSEIEELQKSPASDSETEDALKPQISDSESEEPPRHQASDSENEEPPKPRMSDSESE 214
Query: 619 ELPQPKVLNA-NEEPEIEKKDD 681
ELP+P+V ++ +EEP + D
Sbjct: 215 ELPKPQVSDSESEEPPRHQASD 236
>BC065279-1|AAH65279.1| 375|Homo sapiens IWS1 protein protein.
Length = 375
Score = 36.3 bits (80), Expect = 0.10
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Frame = +1
Query: 448 PKPDCQIDIQEESNQSDSNKEDSQEQALDIKPSMEP--EKATNQVSLESDNYSISDVNS- 618
P D +I+ ++S SDS ED+ + + S EP +A++ + E +SD S
Sbjct: 155 PASDSEIEELQKSPASDSETEDALKPQISDSESEEPPRHQASDSENEEPPKPRMSDSESE 214
Query: 619 ELPQPKVLNA-NEEPEIEKKDD 681
ELP+P+V ++ +EEP + D
Sbjct: 215 ELPKPQVSDSESEEPPRHQASD 236
>AK027561-1|BAB55198.1| 819|Homo sapiens protein ( Homo sapiens
cDNA FLJ14655 fis, clone NT2RP2002292. ).
Length = 819
Score = 36.3 bits (80), Expect = 0.10
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Frame = +1
Query: 448 PKPDCQIDIQEESNQSDSNKEDSQEQALDIKPSMEP--EKATNQVSLESDNYSISDVNS- 618
P D +I+ ++S SDS ED+ + + S EP +A++ + E +SD S
Sbjct: 155 PASDSEIEELQKSPASDSETEDALKPQISDSESEEPPRHQASDSENEEPPKPRMSDSESE 214
Query: 619 ELPQPKVLNA-NEEPEIEKKDD 681
ELP+P+V ++ +EEP + D
Sbjct: 215 ELPKPQVSDSESEEPPRHQASD 236
>X64037-1|CAA45408.1| 517|Homo sapiens RNA polymerase II associated
protein RAP74 protein.
Length = 517
Score = 35.1 bits (77), Expect = 0.23
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 457 DCQIDIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSE 621
D Q D EES + +ED +E+ P+ + +K S ESD+ SD++SE
Sbjct: 302 DEQSDSSEESEEEKPPEEDKEEEEEKKAPTPQEKKRRKDSSEESDSSEESDIDSE 356
>X64002-1|CAA45404.1| 517|Homo sapiens RAP74 protein.
Length = 517
Score = 35.1 bits (77), Expect = 0.23
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 457 DCQIDIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSE 621
D Q D EES + +ED +E+ P+ + +K S ESD+ SD++SE
Sbjct: 302 DEQSDSSEESEEEKPPEEDKEEEEEKKAPTPQEKKRRKDSSEESDSSEESDIDSE 356
>CR456798-1|CAG33079.1| 517|Homo sapiens GTF2F1 protein.
Length = 517
Score = 35.1 bits (77), Expect = 0.23
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 457 DCQIDIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSE 621
D Q D EES + +ED +E+ P+ + +K S ESD+ SD++SE
Sbjct: 302 DEQSDSSEESEEEKPPEEDKEEEEEKKAPTPQEKKRRKDSSEESDSSEESDIDSE 356
>BT007097-1|AAP35761.1| 517|Homo sapiens general transcription
factor IIF, polypeptide 1, 74kDa protein.
Length = 517
Score = 35.1 bits (77), Expect = 0.23
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 457 DCQIDIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSE 621
D Q D EES + +ED +E+ P+ + +K S ESD+ SD++SE
Sbjct: 302 DEQSDSSEESEEEKPPEEDKEEEEEKKAPTPQEKKRRKDSSEESDSSEESDIDSE 356
>BC013007-1|AAH13007.1| 517|Homo sapiens general transcription
factor IIF, polypeptide 1, 74kDa protein.
Length = 517
Score = 35.1 bits (77), Expect = 0.23
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 457 DCQIDIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSE 621
D Q D EES + +ED +E+ P+ + +K S ESD+ SD++SE
Sbjct: 302 DEQSDSSEESEEEKPPEEDKEEEEEKKAPTPQEKKRRKDSSEESDSSEESDIDSE 356
>BC000120-1|AAH00120.1| 517|Homo sapiens general transcription
factor IIF, polypeptide 1, 74kDa protein.
Length = 517
Score = 35.1 bits (77), Expect = 0.23
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 457 DCQIDIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSE 621
D Q D EES + +ED +E+ P+ + +K S ESD+ SD++SE
Sbjct: 302 DEQSDSSEESEEEKPPEEDKEEEEEKKAPTPQEKKRRKDSSEESDSSEESDIDSE 356
>X15949-1|CAA34073.1| 349|Homo sapiens protein ( Human mRNA for
interferon regulatory factor-2 (IRF-2). ).
Length = 349
Score = 33.5 bits (73), Expect = 0.72
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +1
Query: 451 KPDCQIDIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQ 630
KPD Q+ I+EESN N Q L + SM P ++++ E+ S+ S++ Q
Sbjct: 285 KPDLQVTIKEESNPVPYNSSWPPFQDLPLSSSMTPASSSSRPDRET-RASVIKKTSDITQ 343
Query: 631 PKV 639
+V
Sbjct: 344 ARV 346
>CR457077-1|CAG33358.1| 349|Homo sapiens IRF2 protein.
Length = 349
Score = 33.5 bits (73), Expect = 0.72
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +1
Query: 451 KPDCQIDIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQ 630
KPD Q+ I+EESN N Q L + SM P ++++ E+ S+ S++ Q
Sbjct: 285 KPDLQVTIKEESNPVPYNSSWPPFQDLPLSSSMTPASSSSRPDRET-RASVIKKTSDITQ 343
Query: 631 PKV 639
+V
Sbjct: 344 ARV 346
>BT007264-1|AAP35928.1| 349|Homo sapiens interferon regulatory
factor 2 protein.
Length = 349
Score = 33.5 bits (73), Expect = 0.72
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +1
Query: 451 KPDCQIDIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQ 630
KPD Q+ I+EESN N Q L + SM P ++++ E+ S+ S++ Q
Sbjct: 285 KPDLQVTIKEESNPVPYNSSWPPFQDLPLSSSMTPASSSSRPDRET-RASVIKKTSDITQ 343
Query: 631 PKV 639
+V
Sbjct: 344 ARV 346
>BC015803-1|AAH15803.1| 349|Homo sapiens interferon regulatory
factor 2 protein.
Length = 349
Score = 33.5 bits (73), Expect = 0.72
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +1
Query: 451 KPDCQIDIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQ 630
KPD Q+ I+EESN N Q L + SM P ++++ E+ S+ S++ Q
Sbjct: 285 KPDLQVTIKEESNPVPYNSSWPPFQDLPLSSSMTPASSSSRPDRET-RASVIKKTSDITQ 343
Query: 631 PKV 639
+V
Sbjct: 344 ARV 346
>U94319-1|AAB52589.1| 351|Homo sapiens DFS70 protein.
Length = 351
Score = 30.3 bits (65), Expect = 6.7
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +1
Query: 475 QEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNANE 654
QEE K+D + Q + KP EP+K + +ES +++ P +
Sbjct: 43 QEEKQPKKQPKKDEEGQKEEDKPRKEPDKKEGKKEVESKRKNLAKTGVTSPSDSE-EEGD 101
Query: 655 EPEIEKK 675
+ E EKK
Sbjct: 102 DQEGEKK 108
>AJ640137-1|CAG26691.1| 2697|Homo sapiens delangin protein.
Length = 2697
Score = 29.9 bits (64), Expect = 8.8
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 469 DIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNA 648
D ++E S S + +S + ++ P K+ +V +SD+ S D+NS + K L
Sbjct: 2475 DKRKERKSSPSKENESSDSEEEVS---RPRKSRKRVDSDSDSDSEDDINSVM---KCLPE 2528
Query: 649 NEEPEIE 669
N P IE
Sbjct: 2529 NSAPLIE 2535
>AJ627032-1|CAF25290.1| 2804|Homo sapiens delangin protein.
Length = 2804
Score = 29.9 bits (64), Expect = 8.8
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 469 DIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNA 648
D ++E S S + +S + ++ P K+ +V +SD+ S D+NS + K L
Sbjct: 2475 DKRKERKSSPSKENESSDSEEEVS---RPRKSRKRVDSDSDSDSEDDINSVM---KCLPE 2528
Query: 649 NEEPEIE 669
N P IE
Sbjct: 2529 NSAPLIE 2535
>AB019602-1|BAA77349.1| 2158|Homo sapiens IDN3-B protein.
Length = 2158
Score = 29.9 bits (64), Expect = 8.8
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 469 DIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNA 648
D ++E S S + +S + ++ P K+ +V +SD+ S D+NS + K L
Sbjct: 1936 DKRKERKSSPSKENESSDSEEEVS---RPRKSRKRVDSDSDSDSEDDINSVM---KCLPE 1989
Query: 649 NEEPEIE 669
N P IE
Sbjct: 1990 NSAPLIE 1996
>AB019494-1|BAA77335.1| 2265|Homo sapiens IDN3 protein.
Length = 2265
Score = 29.9 bits (64), Expect = 8.8
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 469 DIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNA 648
D ++E S S + +S + ++ P K+ +V +SD+ S D+NS + K L
Sbjct: 1936 DKRKERKSSPSKENESSDSEEEVS---RPRKSRKRVDSDSDSDSEDDINSVM---KCLPE 1989
Query: 649 NEEPEIE 669
N P IE
Sbjct: 1990 NSAPLIE 1996
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.297 0.119 0.302
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,750,054
Number of Sequences: 237096
Number of extensions: 1137327
Number of successful extensions: 1837
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1837
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 17 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 44 (21.9 bits)
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