Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0402
(683 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 36 0.036
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 36 0.036
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 34 0.11
AC006665-3|AAF39905.1| 605|Caenorhabditis elegans Hypothetical ... 33 0.25
Z35604-2|CAA84677.1| 809|Caenorhabditis elegans Hypothetical pr... 32 0.33
U19744-1|AAA85704.1| 809|Caenorhabditis elegans integrin beta p... 32 0.33
U40419-8|AAA81428.3| 673|Caenorhabditis elegans Hypothetical pr... 31 0.77
U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical pr... 30 1.8
U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein ... 30 1.8
U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein ... 30 1.8
U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein. 30 1.8
U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein. 30 1.8
U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with ta... 30 1.8
U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with ta... 30 1.8
U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with ta... 30 1.8
Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z92813-3|CAB07287.1| 621|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical pr... 29 4.1
U28738-14|AAA68316.2| 129|Caenorhabditis elegans Hypothetical p... 29 4.1
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 4.1
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 4.1
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 4.1
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 29 4.1
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 29 4.1
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 28 5.4
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 28 5.4
U97194-2|AAN84846.1| 806|Caenorhabditis elegans Prion-like-(q/n... 28 7.1
U97194-1|AAK68236.1| 788|Caenorhabditis elegans Prion-like-(q/n... 28 7.1
U23139-6|AAK31489.2| 520|Caenorhabditis elegans Hypothetical pr... 28 7.1
AF170425-1|AAF89696.1| 788|Caenorhabditis elegans putative MAP-... 28 7.1
AC026301-3|AAK68898.2| 332|Caenorhabditis elegans Hypothetical ... 28 7.1
Z73906-7|CAA98119.2| 428|Caenorhabditis elegans Hypothetical pr... 27 9.4
U28739-11|AAR25657.1| 487|Caenorhabditis elegans Hypothetical p... 27 9.4
U28739-10|AAR25656.1| 683|Caenorhabditis elegans Hypothetical p... 27 9.4
AF040653-4|ABS83854.1| 339|Caenorhabditis elegans Hypothetical ... 27 9.4
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 35.5 bits (78), Expect = 0.036
Identities = 23/81 (28%), Positives = 41/81 (50%)
Frame = +1
Query: 61 PSEVKTKIDSEQKMEIVTVPAAVDKTESDRKVEDTSNITLVIPEIKVDDTEMIEQKLDEQ 240
PS+ K K++ + + E K +SD K ++ T +IP + + + + ++ E+
Sbjct: 1148 PSK-KRKLEKKDEKEKDRREPERKKGKSDGKEYSKASTTSLIPTLSLKNFRIPKKDTVEE 1206
Query: 241 SMITIKEETQGDSSETENKTE 303
+KEE G SS TE+K E
Sbjct: 1207 EKKDVKEEAPGPSSSTESKKE 1227
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +1
Query: 463 QIDIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVL 642
Q++ N ++ D DIKPS++ +L+ + S S P PK
Sbjct: 1005 QVNRARNLNDIFDDEADDSSPTADIKPSLQ--------ALQKPTDTSSQSTSSEPPPKKE 1056
Query: 643 NANEEPEIEKK 675
A+E+PE EK+
Sbjct: 1057 PADEQPEREKE 1067
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 35.5 bits (78), Expect = 0.036
Identities = 23/81 (28%), Positives = 41/81 (50%)
Frame = +1
Query: 61 PSEVKTKIDSEQKMEIVTVPAAVDKTESDRKVEDTSNITLVIPEIKVDDTEMIEQKLDEQ 240
PS+ K K++ + + E K +SD K ++ T +IP + + + + ++ E+
Sbjct: 1148 PSK-KRKLEKKDEKEKDRREPERKKGKSDGKEYSKASTTSLIPTLSLKNFRIPKKDTVEE 1206
Query: 241 SMITIKEETQGDSSETENKTE 303
+KEE G SS TE+K E
Sbjct: 1207 EKKDVKEEAPGPSSSTESKKE 1227
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +1
Query: 463 QIDIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVL 642
Q++ N ++ D DIKPS++ +L+ + S S P PK
Sbjct: 1005 QVNRARNLNDIFDDEADDSSPTADIKPSLQ--------ALQKPTDTSSQSTSSEPPPKKE 1056
Query: 643 NANEEPEIEKK 675
A+E+PE EK+
Sbjct: 1057 PADEQPEREKE 1067
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +1
Query: 448 PKPDCQIDIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSI-SDVN-SE 621
P P + ++QEE + +S + + +E++ +++ E EK E ++ + S+ N E
Sbjct: 153 PVPKKKKEVQEEPEEEESVEGEDEEESQEVEDLKEDEKMEEDEKEEEEDVQLESEKNEKE 212
Query: 622 LPQPKVLNANEEPEIEKKDD 681
+ KV EE E E++++
Sbjct: 213 EEEEKVEEKKEEEEEEEEEE 232
>AC006665-3|AAF39905.1| 605|Caenorhabditis elegans Hypothetical
protein H27M09.3 protein.
Length = 605
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/68 (22%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 472 IQEESNQSDSNKEDS-QEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNA 648
+Q ++ + D++ S Q +++ +P E E+ +N + + + +V+ E+P+ +
Sbjct: 364 VQRDAEELDTSAVPSPQPESILDEPEEEEEELSNHENHADQSMDVMEVDQEVPEESPMEV 423
Query: 649 NEEPEIEK 672
E+ EIE+
Sbjct: 424 GEQEEIEQ 431
>Z35604-2|CAA84677.1| 809|Caenorhabditis elegans Hypothetical
protein ZK1058.2 protein.
Length = 809
Score = 32.3 bits (70), Expect = 0.33
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 454 PDCQIDIQEESNQSDSNKEDSQEQALDIKP 543
P ++DI E+S SD + +S+E+A+ IKP
Sbjct: 96 PATKLDITEDSKLSDQGQVESEEEAVQIKP 125
>U19744-1|AAA85704.1| 809|Caenorhabditis elegans integrin beta
pat-3 protein.
Length = 809
Score = 32.3 bits (70), Expect = 0.33
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 454 PDCQIDIQEESNQSDSNKEDSQEQALDIKP 543
P ++DI E+S SD + +S+E+A+ IKP
Sbjct: 96 PATKLDITEDSKLSDQGQVESEEEAVQIKP 125
>U40419-8|AAA81428.3| 673|Caenorhabditis elegans Hypothetical
protein C27F2.1 protein.
Length = 673
Score = 31.1 bits (67), Expect = 0.77
Identities = 17/75 (22%), Positives = 35/75 (46%)
Frame = +1
Query: 451 KPDCQIDIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQ 630
K + + D ++ S + K+ ++++ IKP EPE N+ + ++Y + +
Sbjct: 15 KKEKKKDKEKSSKEKKEKKDKKEKKSKTIKPEPEPE-PVNEYEDDFEDYEDDFEEDDEEE 73
Query: 631 PKVLNANEEPEIEKK 675
K E+P+ E K
Sbjct: 74 KKAPKVEEKPQKESK 88
>U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical
protein F55F8.7 protein.
Length = 518
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 493 SDSNKED--SQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNANEEPEI 666
S NK+D S+ + LD +P E ++ + S+ + N E+P K LN+ EE +
Sbjct: 31 SKKNKKDINSETKTLDKRPQTA-ELVKDEKNSNSEEKKTASAN-EVPAQKKLNSKEEVKK 88
Query: 667 EKK 675
EKK
Sbjct: 89 EKK 91
>U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein
protein.
Length = 413
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 448 PKPDCQIDIQEESNQSDSNKEDSQEQALDIKPSME-PEKATNQV----SLESDNYSISDV 612
P+P+ ++ +EE +E E++ KPS P+ T + LES N+S +
Sbjct: 108 PEPEPVVEKEEEVVVESPPREQEPEKSGKSKPSSPIPDAPTMEDIAPRELESLNFSETSG 167
Query: 613 NSELPQPKVLNANEEPEIEKK 675
S+ +++ NE +E+K
Sbjct: 168 TSDQQADRIMQNNENERVEEK 188
>U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein
protein.
Length = 453
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 448 PKPDCQIDIQEESNQSDSNKEDSQEQALDIKPSME-PEKATNQV----SLESDNYSISDV 612
P+P+ ++ +EE +E E++ KPS P+ T + LES N+S +
Sbjct: 108 PEPEPVVEKEEEVVVESPPREQEPEKSGKSKPSSPIPDAPTMEDIAPRELESLNFSETSG 167
Query: 613 NSELPQPKVLNANEEPEIEKK 675
S+ +++ NE +E+K
Sbjct: 168 TSDQQADRIMQNNENERVEEK 188
>U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein.
Length = 436
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 448 PKPDCQIDIQEESNQSDSNKEDSQEQALDIKPSME-PEKATNQV----SLESDNYSISDV 612
P+P+ ++ +EE +E E++ KPS P+ T + LES N+S +
Sbjct: 86 PEPEPVVEKEEEVVVESPPREQEPEKSGKSKPSSPIPDAPTMEDIAPRELESLNFSETSG 145
Query: 613 NSELPQPKVLNANEEPEIEKK 675
S+ +++ NE +E+K
Sbjct: 146 TSDQQADRIMQNNENERVEEK 166
>U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein.
Length = 431
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 448 PKPDCQIDIQEESNQSDSNKEDSQEQALDIKPSME-PEKATNQV----SLESDNYSISDV 612
P+P+ ++ +EE +E E++ KPS P+ T + LES N+S +
Sbjct: 86 PEPEPVVEKEEEVVVESPPREQEPEKSGKSKPSSPIPDAPTMEDIAPRELESLNFSETSG 145
Query: 613 NSELPQPKVLNANEEPEIEKK 675
S+ +++ NE +E+K
Sbjct: 146 TSDQQADRIMQNNENERVEEK 166
>U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform a protein.
Length = 453
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 448 PKPDCQIDIQEESNQSDSNKEDSQEQALDIKPSME-PEKATNQV----SLESDNYSISDV 612
P+P+ ++ +EE +E E++ KPS P+ T + LES N+S +
Sbjct: 108 PEPEPVVEKEEEVVVESPPREQEPEKSGKSKPSSPIPDAPTMEDIAPRELESLNFSETSG 167
Query: 613 NSELPQPKVLNANEEPEIEKK 675
S+ +++ NE +E+K
Sbjct: 168 TSDQQADRIMQNNENERVEEK 188
>U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform c protein.
Length = 413
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 448 PKPDCQIDIQEESNQSDSNKEDSQEQALDIKPSME-PEKATNQV----SLESDNYSISDV 612
P+P+ ++ +EE +E E++ KPS P+ T + LES N+S +
Sbjct: 108 PEPEPVVEKEEEVVVESPPREQEPEKSGKSKPSSPIPDAPTMEDIAPRELESLNFSETSG 167
Query: 613 NSELPQPKVLNANEEPEIEKK 675
S+ +++ NE +E+K
Sbjct: 168 TSDQQADRIMQNNENERVEEK 188
>U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform b protein.
Length = 458
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 448 PKPDCQIDIQEESNQSDSNKEDSQEQALDIKPSME-PEKATNQV----SLESDNYSISDV 612
P+P+ ++ +EE +E E++ KPS P+ T + LES N+S +
Sbjct: 108 PEPEPVVEKEEEVVVESPPREQEPEKSGKSKPSSPIPDAPTMEDIAPRELESLNFSETSG 167
Query: 613 NSELPQPKVLNANEEPEIEKK 675
S+ +++ NE +E+K
Sbjct: 168 TSDQQADRIMQNNENERVEEK 188
>Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical
protein F25H5.5 protein.
Length = 725
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +1
Query: 499 SNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNANEEPEIEKK 675
S+ EDS E+A + + + E+ + +ES+N E P P + ++E I K+
Sbjct: 396 SDGEDSDEEAEEAEEEGDDEEEPEEDDIESENDEAETEGVEAPDPNFDDEDDELAILKR 454
>Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/82 (24%), Positives = 38/82 (46%)
Frame = +1
Query: 58 PPSEVKTKIDSEQKMEIVTVPAAVDKTESDRKVEDTSNITLVIPEIKVDDTEMIEQKLDE 237
P V K + + + T PAA T+SD + ++ SN + + + I +L+E
Sbjct: 111 PSPRVSKKQEQQTTQQKTTQPAAAQVTDSDDEDDEESNEHTLGGRLFAGLRKKITDRLNE 170
Query: 238 QSMITIKEETQGDSSETENKTE 303
++ +KEE + + + N E
Sbjct: 171 KA---VKEEPKSKNDQILNPRE 189
>Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/82 (24%), Positives = 38/82 (46%)
Frame = +1
Query: 58 PPSEVKTKIDSEQKMEIVTVPAAVDKTESDRKVEDTSNITLVIPEIKVDDTEMIEQKLDE 237
P V K + + + T PAA T+SD + ++ SN + + + I +L+E
Sbjct: 111 PSPRVSKKQEQQTTQQKTTQPAAAQVTDSDDEDDEESNEHTLGGRLFAGLRKKITDRLNE 170
Query: 238 QSMITIKEETQGDSSETENKTE 303
++ +KEE + + + N E
Sbjct: 171 KA---VKEEPKSKNDQILNPRE 189
>Z92813-3|CAB07287.1| 621|Caenorhabditis elegans Hypothetical
protein T28A8.3 protein.
Length = 621
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +1
Query: 481 ESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLE---SDNYSISDVNSELP 627
ES +SD ++E +D P +EP + + +DN SI D++ +P
Sbjct: 327 ESGESDDDEEMEDVGGIDGDPDLEPIDVEHDKIADRDVADNSSIDDIHENMP 378
>Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical
protein C35A5.4 protein.
Length = 427
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +1
Query: 484 SNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNANEEP 660
S+ S K++SQE++ P + P+ + + N+S N L P N P
Sbjct: 355 SHSPKSPKKNSQEKSAPPSPKLPPKTTAPTPTKDGGNHSPKTTNKALEPPPSPNRTHSP 413
>U28738-14|AAA68316.2| 129|Caenorhabditis elegans Hypothetical
protein T28D9.1 protein.
Length = 129
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 202 DDTEMIEQKLDEQSMITIKEETQGDSSETENKTE 303
DD +I++K EQ+ EETQ +++E +N+TE
Sbjct: 29 DDVVVIDEKTSEQNGEKT-EETQAEATEEKNETE 61
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +1
Query: 481 ESNQSDSNKEDSQEQALDIKPSME--PEKATNQVSLESDNYSISDVNSELPQPKVLNANE 654
+ + D NK+ E L K ++ PEK + E + SIS+ + L +
Sbjct: 9153 KKDDKDVNKKSLPESGLTTKKEIQGKPEKKIMKKKTEKADSSISETSETLTKDLTQTKQS 9212
Query: 655 EPEIEKK 675
EPE K+
Sbjct: 9213 EPEPAKR 9219
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +1
Query: 481 ESNQSDSNKEDSQEQALDIKPSME--PEKATNQVSLESDNYSISDVNSELPQPKVLNANE 654
+ + D NK+ E L K ++ PEK + E + SIS+ + L +
Sbjct: 9173 KKDDKDVNKKSLPESGLTTKKEIQGKPEKKIMKKKTEKADSSISETSETLTKDLTQTKQS 9232
Query: 655 EPEIEKK 675
EPE K+
Sbjct: 9233 EPEPAKR 9239
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +1
Query: 481 ESNQSDSNKEDSQEQALDIKPSME--PEKATNQVSLESDNYSISDVNSELPQPKVLNANE 654
+ + D NK+ E L K ++ PEK + E + SIS+ + L +
Sbjct: 9173 KKDDKDVNKKSLPESGLTTKKEIQGKPEKKIMKKKTEKADSSISETSETLTKDLTQTKQS 9232
Query: 655 EPEIEKK 675
EPE K+
Sbjct: 9233 EPEPAKR 9239
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +1
Query: 478 EESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPK 636
EES++S+ + E+ +E+ KP + A ++S + ++ SDV LPQ K
Sbjct: 256 EESSESEKSDEEEEEKESSPKPKKKKPLAVKKLSSDEESEE-SDV-EVLPQKK 306
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +1
Query: 478 EESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPK 636
EES++S+ + E+ +E+ KP + A ++S + ++ SDV LPQ K
Sbjct: 256 EESSESEKSDEEEEEKESSPKPKKKKPLAVKKLSSDEESEE-SDV-EVLPQKK 306
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +1
Query: 475 QEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNANE 654
+EE + + KE+ +++ + K EP+K + E + SE + K L +
Sbjct: 318 KEEEKKEEEQKEEVEKKEEEEKKDEEPKKEEEKKEEEEKKEDEVEEKSEKVEEKELEPKK 377
Query: 655 EPEIEKKD 678
+ E KK+
Sbjct: 378 DEEETKKN 385
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical
protein T06E4.1 protein.
Length = 1295
Score = 28.3 bits (60), Expect = 5.4
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +1
Query: 67 EVKTKIDSEQKMEIVTVPAAVDKTESDRKVEDTSNITLV--IPEIKVDDTEMIEQKLDEQ 240
E+K + E+KM + V AV KT+S+R+ T L I E+++ TE +KL +
Sbjct: 254 EIKEAREVEEKMLMQQVEEAVKKTKSEREAAKTLEQLLEKRIEELEMKLTEPNGEKLQFE 313
Query: 241 SMITIKEETQGDSSETENK 297
+ EE + E +K
Sbjct: 314 HQL---EELKSRCEELTDK 329
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +1
Query: 487 NQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNANEEPEI 666
N D++ ED +E IKP +PEKA ++V +E +S + + K + +E +
Sbjct: 396 NLVDTSSEDEEEDVEIIKPIEQPEKA-SEVLVEPIKKVVSSIKINGIEVKDVEKTKEDKK 454
Query: 667 E 669
E
Sbjct: 455 E 455
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +1
Query: 478 EESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNANEE 657
EE + + + E+ +IK +E ++ Q E +NY IS+++ + + NEE
Sbjct: 957 EEKERLEIEAKKEAERQREIKRKLEEQQQNAQK--EHENYLISEIHKAAEETEKKRQNEE 1014
Query: 658 PE 663
E
Sbjct: 1015 KE 1016
>U97194-2|AAN84846.1| 806|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 21,
isoform b protein.
Length = 806
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = +1
Query: 454 PDCQIDIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSE-LPQ 630
P+ Q S KED + D +EP + ++ LE D V E + +
Sbjct: 39 PEFQTTYDAHDQAETSGKEDGELDEDDENDDIEPMEIDEEIQLEIDEKPEDLVKDEQISE 98
Query: 631 PKVLNANEEPEIEKKDD 681
P E ++EK D+
Sbjct: 99 PTDKMREEFLKVEKTDE 115
>U97194-1|AAK68236.1| 788|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 21,
isoform a protein.
Length = 788
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = +1
Query: 454 PDCQIDIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSE-LPQ 630
P+ Q S KED + D +EP + ++ LE D V E + +
Sbjct: 39 PEFQTTYDAHDQAETSGKEDGELDEDDENDDIEPMEIDEEIQLEIDEKPEDLVKDEQISE 98
Query: 631 PKVLNANEEPEIEKKDD 681
P E ++EK D+
Sbjct: 99 PTDKMREEFLKVEKTDE 115
>U23139-6|AAK31489.2| 520|Caenorhabditis elegans Hypothetical
protein F13H8.8 protein.
Length = 520
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +1
Query: 478 EESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNANEE 657
E S D K S E A ++ P+ E + +E ISD+ E+PQP L +
Sbjct: 77 EGSENRDEEKPQSCETAEEV-PA-EQSNHPKEREIEEPACRISDIRIEVPQPPPLMKKSD 134
Query: 658 PEIEKKD 678
+ + +D
Sbjct: 135 KKRKMRD 141
>AF170425-1|AAF89696.1| 788|Caenorhabditis elegans putative
MAP-like protein protein.
Length = 788
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = +1
Query: 454 PDCQIDIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSE-LPQ 630
P+ Q S KED + D +EP + ++ LE D V E + +
Sbjct: 39 PEFQTTYDAHDQAETSGKEDGELDEDDENDDIEPMEIDEEIQLEIDEKPEDLVKDEQISE 98
Query: 631 PKVLNANEEPEIEKKDD 681
P E ++EK D+
Sbjct: 99 PTDKMREEFLKVEKTDE 115
>AC026301-3|AAK68898.2| 332|Caenorhabditis elegans Hypothetical
protein Y54F10BM.7 protein.
Length = 332
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 234 IKFLFNHFCIINFNFWYYQGDIRGVFHFS 148
I L+ C NF WY + D + + HFS
Sbjct: 207 ITLLYQWKCAKNFEIWYSRLDSKFILHFS 235
>Z73906-7|CAA98119.2| 428|Caenorhabditis elegans Hypothetical
protein D2030.7 protein.
Length = 428
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 91 EQKMEIVTVPAAVDKTESDRKVEDTSNITLVIPEIKVDDT--EMIEQKLDEQSMITIKEE 264
E + I P+ + + + EDT ++ VIPE V D E I + +++++ + +
Sbjct: 202 EIRPRIHEFPSTREIKQEENTTEDTVHLEKVIPEDSVRDVKDEPISEPVEQETSSSSISK 261
Query: 265 TQGDSSETE 291
GDS ++
Sbjct: 262 ELGDSGSSK 270
>U28739-11|AAR25657.1| 487|Caenorhabditis elegans Hypothetical
protein C17G10.6b protein.
Length = 487
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = +1
Query: 457 DCQIDIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSE 621
D + D ++E + + + ED + K K N+ E DN D N+E
Sbjct: 343 DHEEDYEDEDEEEEDDNEDDENSRKKKKGRKNGRKKNNEDEEEDDNDEDDDGNNE 397
>U28739-10|AAR25656.1| 683|Caenorhabditis elegans Hypothetical
protein C17G10.6a protein.
Length = 683
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = +1
Query: 457 DCQIDIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSE 621
D + D ++E + + + ED + K K N+ E DN D N+E
Sbjct: 394 DHEEDYEDEDEEEEDDNEDDENSRKKKKGRKNGRKKNNEDEEEDDNDEDDDGNNE 448
>AF040653-4|ABS83854.1| 339|Caenorhabditis elegans Hypothetical
protein K05F6.12 protein.
Length = 339
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = -3
Query: 231 KFLFNHFCIINFNFWYYQGDIRGVFHFSIRFSFINCCRHSD 109
K HFCI + Y + D ++ S + ++ C H+D
Sbjct: 55 KHFIRHFCIFKELYLYVEVDYALEYNISFQGVLLHSCSHTD 95
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.297 0.119 0.302
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,150,474
Number of Sequences: 27780
Number of extensions: 188900
Number of successful extensions: 474
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 17 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 44 (21.9 bits)
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