Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0401
(660 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150; Eukary... 352 5e-96
UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15; Eukaryo... 301 1e-80
UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3; Fungi/... 257 2e-67
UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella... 194 2e-48
UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;... 180 3e-44
UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1; Encephal... 175 6e-43
UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5; Archaea... 175 1e-42
UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13; Archae... 170 2e-41
UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9; Euryarc... 150 3e-35
UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3; Euryarc... 148 1e-34
UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15; Euryar... 147 2e-34
UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus M... 139 5e-32
UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10; Archae... 138 8e-32
UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_030012... 116 5e-25
UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo... 92 9e-18
UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein ... 54 2e-06
UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n... 54 4e-06
UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-05
UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|R... 49 1e-04
UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7; n... 49 1e-04
UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7; n... 48 2e-04
UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albic... 47 5e-04
UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211; Bacter... 44 0.002
UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7; n... 44 0.002
UniRef50_A0ARS1 Cluster: 30S ribosomal protein S7; n=3; Poales|R... 44 0.003
UniRef50_Q9HWD1 Cluster: 30S ribosomal protein S7; n=89; Bacteri... 42 0.017
UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyc... 38 0.16
UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1; ... 38 0.28
UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit... 38 0.28
UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n... 37 0.37
UniRef50_Q2J9E2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.65
UniRef50_P47150 Cluster: 37S ribosomal protein S7, mitochondrial... 36 0.65
UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD... 36 0.86
UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2; ... 35 1.5
UniRef50_Q85FT8 Cluster: Chloroplast 30S ribosomal protein S7; n... 35 2.0
UniRef50_Q1JY60 Cluster: Multicopper oxidase, type 3 precursor; ... 33 4.6
UniRef50_O96282 Cluster: Putative uncharacterized protein PFB095... 33 6.1
UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1; ... 33 6.1
UniRef50_P14760 Cluster: Plastid 30S ribosomal protein S7; n=1; ... 33 6.1
UniRef50_A6EW85 Cluster: Putative uncharacterized protein; n=1; ... 33 8.0
>UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150;
Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens
(Human)
Length = 204
Score = 352 bits (865), Expect = 5e-96
Identities = 167/184 (90%), Positives = 176/184 (95%)
Frame = +3
Query: 108 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 287
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 288 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 467
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 468 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 647
GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSY
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSY 188
Query: 648 AIKK 659
AIKK
Sbjct: 189 AIKK 192
>UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15;
Eukaryota|Rep: 40S ribosomal protein S5 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 197
Score = 301 bits (738), Expect = 1e-80
Identities = 144/178 (80%), Positives = 162/178 (91%), Gaps = 1/178 (0%)
Frame = +3
Query: 129 EIKLFGRWSCYDVQVSDMSLQDYISV-KEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTN 305
E+KLF RWS DVQ+SD+SL DYI V K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 8 EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 67
Query: 306 SLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTV 485
SLMMHGRNNGKKLMAVRI+KHA EIIHLLT +NP+QV+V A++NSGPRED+TRIG AG V
Sbjct: 68 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVV 127
Query: 486 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKK 659
RRQAVD+SPLRRVNQAI+LL TGAREAAFRNIK+IAEC+ADELINAAKGSSNSYAIKK
Sbjct: 128 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKSIAECLADELINAAKGSSNSYAIKK 185
>UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3;
Fungi/Metazoa group|Rep: 40S ribosomal protein S5-B -
Schizosaccharomyces pombe (Fission yeast)
Length = 203
Score = 257 bits (629), Expect = 2e-67
Identities = 131/195 (67%), Positives = 158/195 (81%)
Frame = +3
Query: 75 AGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYA 254
A S++ + +SL + IKLF ++ V+V D+SL DYI++ + LPH+AGR+
Sbjct: 2 AASIIPKEVSLDETG---HIKLFNKFPFEGVEVKDISLVDYITIGN--GQPLPHTAGRFQ 56
Query: 255 HKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAII 434
KRFRKA+C IVERLTNSLMM+GRNNGKKL+A RIVKHAFEII LLT +NPLQVLV A+
Sbjct: 57 TKRFRKARCFIVERLTNSLMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVA 116
Query: 435 NSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADEL 614
GPREDSTRIG AGTVRRQAVDVSPLRRVNQA+ L+ GAREAAFRN+K+I+EC+A+E+
Sbjct: 117 ACGPREDSTRIGSAGTVRRQAVDVSPLRRVNQALALITIGAREAAFRNVKSISECLAEEI 176
Query: 615 INAAKGSSNSYAIKK 659
INAAKGSSNSYAIKK
Sbjct: 177 INAAKGSSNSYAIKK 191
>UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella
natans|Rep: Ribosomal protein S5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 194 bits (473), Expect = 2e-48
Identities = 85/177 (48%), Positives = 128/177 (72%)
Frame = +3
Query: 129 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 308
++K+F RW V+++D+S+ +YI +KY + +PHS+G Y K F+K CPI+ERL S
Sbjct: 19 KMKVFNRWELEKVKINDISISNYIYFNKKYGELVPHSSGNYDKKPFKKTYCPILERLVCS 78
Query: 309 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 488
LM+ RN+GKK+ + IVKHAF ++H TG+NP+Q+LV AI N P EDS + +G +
Sbjct: 79 LMLKSRNSGKKIKTIAIVKHAFYLLHKTTGKNPIQLLVDAISNCAPHEDSLMLSNSGQKK 138
Query: 489 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKK 659
R+AVDVSP R+++QAI+ + G ++AAF+N K+I+ + DE++NAA+ S+ SYAIKK
Sbjct: 139 REAVDVSPYRKISQAIYFIAVGTKKAAFKNPKSISIALHDEILNAARNSNTSYAIKK 195
>UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 280
Score = 180 bits (438), Expect = 3e-44
Identities = 87/95 (91%), Positives = 91/95 (95%)
Frame = +3
Query: 375 EIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG 554
++ HLL +NPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG
Sbjct: 174 QLQHLLLAQNPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG 233
Query: 555 AREAAFRNIKTIAECVADELINAAKGSSNSYAIKK 659
AREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKK
Sbjct: 234 AREAAFRNIKTIAECLADELINAAKGSSNSYAIKK 268
>UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S5 -
Encephalitozoon cuniculi
Length = 208
Score = 175 bits (427), Expect = 6e-43
Identities = 91/177 (51%), Positives = 125/177 (70%)
Frame = +3
Query: 129 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 308
EI LF ++S +V+V+++SL+ YI++ + +PH+A KA+ PI ER S
Sbjct: 22 EINLFEKYSYEEVKVNNVSLRPYINLSRR--GIVPHAATTITKGTTGKARIPIAERFVCS 79
Query: 309 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 488
LM HGRN+GKK +A+ I + A IIH +T +NPLQVLV AI+NSGPRED+ RIGRAG++R
Sbjct: 80 LMRHGRNSGKKRLAINIFEDACFIIHSMTKKNPLQVLVDAIVNSGPREDTARIGRAGSMR 139
Query: 489 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKK 659
R +VDVSPL+R++ AI L G R A+FRN T+AE +A+ELI A+ S NSYA+ K
Sbjct: 140 RTSVDVSPLKRISIAISNLSAGIRNASFRNRITLAEAIANELIAASTNSQNSYAVNK 196
>UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5;
Archaea|Rep: 30S ribosomal protein S7P - Methanopyrus
kandleri
Length = 197
Score = 175 bits (425), Expect = 1e-42
Identities = 88/177 (49%), Positives = 123/177 (69%)
Frame = +3
Query: 129 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 308
E+K+FG+W +V+V D L+DYI +K Y LPH+ GR+A KRF KA+ PIVERL N
Sbjct: 12 EMKVFGKWDPTEVEVRDPGLKDYICLKPMY---LPHTGGRHAKKRFAKAEVPIVERLINR 68
Query: 309 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 488
+M +N GKK +A IVK AF+IIH TGENP+QVLV A+ N+ PRE++T I G
Sbjct: 69 VMRTEKNTGKKHLAYNIVKRAFDIIHERTGENPIQVLVQALENAAPREETTTIIYGGISY 128
Query: 489 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKK 659
+AVD SP RR++ A+ L+ GA++ AFRN K I EC+A+E+I AA+ + ++I++
Sbjct: 129 HEAVDSSPQRRLDIALRLITEGAQQRAFRNPKPIEECLAEEIIAAARYDTECHSIRR 185
>UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13;
Archaea|Rep: 30S ribosomal protein S7P - Pyrobaculum
aerophilum
Length = 223
Score = 170 bits (414), Expect = 2e-41
Identities = 90/176 (51%), Positives = 114/176 (64%)
Frame = +3
Query: 132 IKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSL 311
I LFG+WS DV V D L+ YI +K LPH+ GRY + RF KA+ PIVERL N +
Sbjct: 39 ILLFGKWSYEDVVVRDPGLRRYICLKPVI---LPHTEGRYQNTRFGKARIPIVERLINLM 95
Query: 312 MMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRR 491
M GRN GKK A IVK AF++I+ TG+NPLQV + AIIN+ PRE+ TRI G
Sbjct: 96 MRPGRNTGKKHKAYNIVKRAFDLIYYKTGKNPLQVFIDAIINTAPREEITRIIMGGIAYS 155
Query: 492 QAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKK 659
+VDVSP RR++ A+ + GAR +F N K I EC+ADE+I AA SYA++K
Sbjct: 156 VSVDVSPQRRLDLALRWITEGARACSFNNPKPIEECLADEIIAAAANDPKSYAVRK 211
>UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanosarcina acetivorans
Length = 189
Score = 150 bits (363), Expect = 3e-35
Identities = 72/175 (41%), Positives = 116/175 (66%)
Frame = +3
Query: 135 KLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLM 314
K+FG+W +V+V D+ ++ Y+S+ +PHS+G++A ++F K++ IVERL N+LM
Sbjct: 6 KIFGKWDPTEVEVKDLGIKRYVSLTPVI---VPHSSGKHARQQFNKSEISIVERLANNLM 62
Query: 315 MHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQ 494
N GKK + +R V+ AF+I++ T +NP+QVLV AI N+GPRE+ R+ G +
Sbjct: 63 RTETNTGKKQVTLRAVEEAFDIVNKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVPK 122
Query: 495 AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKK 659
AVD +P RRV+ A+ + G AAF++ +++AEC+A ELI AA + S++I +
Sbjct: 123 AVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLATELIGAANRDTKSFSINR 177
>UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanococcus vannielii
Length = 194
Score = 148 bits (358), Expect = 1e-34
Identities = 80/178 (44%), Positives = 112/178 (62%), Gaps = 1/178 (0%)
Frame = +3
Query: 129 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 308
EIKLFG+W V V D SL+ +IS+ +PH+AGR + K F K + +VERL N
Sbjct: 8 EIKLFGKWDSTSVTVKDPSLKSHISLNPVL---IPHTAGRNSKKMFDKNKMHVVERLANK 64
Query: 309 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 488
LM N GKK + I++ A I+ T ENP+QV+V A+ NSGPRE++TRI G
Sbjct: 65 LMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVDALENSGPREETTRISYGGIAF 124
Query: 489 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGS-SNSYAIKK 659
Q+VDVSP RR++ A + GA + A ++ K+IA+C+ADEL+ A+K S+A+KK
Sbjct: 125 LQSVDVSPSRRLDTAFRNISLGASQGAHKSKKSIAQCLADELVAASKADMQKSFAVKK 182
>UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Halobacterium salinarium (Halobacterium halobium)
Length = 210
Score = 147 bits (356), Expect = 2e-34
Identities = 81/203 (39%), Positives = 121/203 (59%)
Frame = +3
Query: 45 EENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAK 224
E+ D+ EA + +T + A KLFG+W ++ D S + Y++V
Sbjct: 4 EQPAEDETEEAAAESEDTQEVAANA-----KLFGKWDVAEIHYEDPSTRRYLAVTP---- 54
Query: 225 YLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGEN 404
+ H+ GR+A K+F+K++ IVERL N LM G N GKK A++IV+ AF+I+H T EN
Sbjct: 55 -VAHTMGRHAQKQFKKSEISIVERLANRLMKTGANAGKKQQALKIVRDAFDIVHERTDEN 113
Query: 405 PLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIK 584
P+QVLV+A+ N+ PRE++ R+ G QAVD +P RRV+QA+ L GA A+F+
Sbjct: 114 PIQVLVSAVENAAPREETVRLKYGGISVPQAVDTAPQRRVDQALKFLADGAHSASFKTPT 173
Query: 585 TIAECVADELINAAKGSSNSYAI 653
AE +A++L AA + +YAI
Sbjct: 174 DAAEALANQLAGAADYNVQTYAI 196
>UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S7 -
Methanoregula boonei (strain 6A8)
Length = 204
Score = 139 bits (337), Expect = 5e-32
Identities = 74/191 (38%), Positives = 117/191 (61%), Gaps = 2/191 (1%)
Frame = +3
Query: 93 ETMSLPQAADIPEIK--LFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRF 266
E + P+ P+ K LF +W +V+V+D SL Y+++ + +PHS G+++ + F
Sbjct: 5 EVKAQPEGDAAPQSKALLFNKWDVSEVKVTDPSLVRYVNLTPQI---IPHSCGKFSRQEF 61
Query: 267 RKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 446
KA IVERL N LM N GKK +A+ IV+ AFE+I+ T NP++VLV AI N+GP
Sbjct: 62 NKANMMIVERLINRLMQTENNTGKKQLAIGIVRDAFELINKKTKRNPIEVLVEAIGNTGP 121
Query: 447 REDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAA 626
RE++ R+ G ++VD +PLRRV+ AI + +++ ++ K + +ADELI A+
Sbjct: 122 REETVRLKYGGINVPKSVDTAPLRRVDSAIGFIAEAVWKSSRKSKKPASAILADELIAAS 181
Query: 627 KGSSNSYAIKK 659
KG + Y++ K
Sbjct: 182 KGDAKCYSVGK 192
>UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10;
Archaea|Rep: 30S ribosomal protein S7P - Pyrococcus
horikoshii
Length = 218
Score = 138 bits (335), Expect = 8e-32
Identities = 83/193 (43%), Positives = 112/193 (58%), Gaps = 16/193 (8%)
Frame = +3
Query: 129 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 308
EIK+ GRWS DV+V D SL+ YI+++ + LPH+ GR+A K F KA IVERL N
Sbjct: 17 EIKVMGRWSTEDVEVKDPSLKPYINLEPRL---LPHTHGRHAKKHFGKANVHIVERLINK 73
Query: 309 LMMHGRN----------------NGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINS 440
+M G + N KK+ A +VK AF+II TG+NP+QVLV AI N+
Sbjct: 74 VMRSGGSHYKVAGHFMRREHRSLNSKKVRAYEVVKEAFKIIEKRTGKNPIQVLVWAIENA 133
Query: 441 GPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELIN 620
PRED+T + G AVD+SPLRR++ A+ + GA +R + AE +A+E+I
Sbjct: 134 APREDTTSVMFGGIRYHVAVDISPLRRLDVALRNIALGASAKCYRTKMSFAEALAEEIIL 193
Query: 621 AAKGSSNSYAIKK 659
AA SYA K
Sbjct: 194 AANKDPKSYAYSK 206
>UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_03001272;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001272 - Ferroplasma acidarmanus fer1
Length = 182
Score = 116 bits (279), Expect = 5e-25
Identities = 63/166 (37%), Positives = 103/166 (62%), Gaps = 1/166 (0%)
Frame = +3
Query: 165 VQVSDMSLQDYISVKEKYAKYLP-HSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKK 341
+Q+ D L YI++ YL + GR+++ K +ERL N+LM + GKK
Sbjct: 9 IQIKDQGLATYINL----TSYLNLDTGGRFSNYLSGKRNVNTIERLLNNLMRTEKWTGKK 64
Query: 342 LMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRR 521
A +++ AF+II T +NP+Q+LV+AI NS PRE+ TR+ G ++VDVSP RR
Sbjct: 65 YSAYKVMSQAFDIIATKTKQNPVQILVSAIENSAPREEVTRLKYGGIAVPKSVDVSPSRR 124
Query: 522 VNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKK 659
+++A+ + GA +A+F++ I +C+A+E++ AA+ +NS+AI K
Sbjct: 125 LDEALRNIARGATKASFKHKIHIQDCLANEILLAARNDANSFAISK 170
>UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo
sapiens|Rep: Ribosomal protein S5 variant - Homo sapiens
(Human)
Length = 107
Score = 92.3 bits (219), Expect = 9e-18
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +3
Query: 273 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 428
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein S7;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein S7 - Candida albicans (Yeast)
Length = 251
Score = 54.4 bits (125), Expect = 2e-06
Identities = 37/134 (27%), Positives = 66/134 (49%)
Frame = +3
Query: 246 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 425
+YA+K+ P V+ LTN +M H GKK A ++V A I+ L ++P++VL
Sbjct: 105 KYANKKIPLRSDPTVDNLTNLIMRH----GKKAKAQKVVSRALYIVQLKLRKDPIEVLRE 160
Query: 426 AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVA 605
+ GP +T+ G +++ V + PL + + + + R + +A
Sbjct: 161 TLDKLGPLV-NTKTMSTGVAKKRVVPI-PLNEKQRNRFAIKWILEASNSRKSNDFSVRLA 218
Query: 606 DELINAAKGSSNSY 647
+E+INA +G S+ Y
Sbjct: 219 EEIINAYQGKSSGY 232
>UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n=1;
Odontella sinensis|Rep: Chloroplast 30S ribosomal
protein S7 - Odontella sinensis (Marine centric diatom)
Length = 158
Score = 53.6 bits (123), Expect = 4e-06
Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 2/136 (1%)
Frame = +3
Query: 258 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIN 437
KRF +A L + L+ +GKK +A IV AFEII + T E+PL V AI N
Sbjct: 9 KRFPEADSTYNSYLVSLLITRILKSGKKNLAQNIVNAAFEIIKVKTNEDPLVVFERAIRN 68
Query: 438 SGP--REDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADE 611
+ P + RIG G+ + V+VS R N ++ + +R+ R T++ +A+E
Sbjct: 69 ASPVVEVKARRIG--GSTYQVPVEVSGFRATNLSLRWIIQYSRQRVGR---TMSIKLANE 123
Query: 612 LINAAKGSSNSYAIKK 659
+I+ A N+ IKK
Sbjct: 124 IIDTANDIGNT--IKK 137
>UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 77
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +3
Query: 39 MAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYIS 203
M+E D+ E V E + Q A++P+IKLFGRWS D+ +SD+S+ DYI+
Sbjct: 1 MSEVEAFDNFEEEQPQVFEQAPVVQPAELPDIKLFGRWSSDDIHISDISVSDYIA 55
>UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|Rep:
ORFD 65 - Desulfurococcus mobilis
Length = 65
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = -3
Query: 379 ISNACLTIRTAISFLPLFRPCIIREFVRRSTIGHWALRKRLCAYLPAE*GKYFAY 215
+S A LT+ A FLP+F P I F+ ST+G W L KRLC+ LP G+Y +
Sbjct: 1 MSKAFLTMWYARCFLPMFLPGRITLFISLSTMGTWVLPKRLCSCLPPVCGRYTGF 55
>UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7;
n=22; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Guillardia theta (Cryptomonas phi)
Length = 156
Score = 48.8 bits (111), Expect = 1e-04
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Frame = +3
Query: 294 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRED--STRI 467
RL N L + GKK +A RI+ +AF+II TGE+ + V +AI P + + RI
Sbjct: 21 RLVNMLTVRILKEGKKHLAQRIIYNAFDIIKQRTGEDAILVFESAIKKVTPLVEVKARRI 80
Query: 468 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNS 644
G G+ + ++V R N A+ + ARE A K+++ +A+E+++AA + +S
Sbjct: 81 G--GSTYQVPMEVRAFRGTNLALRWITKYARERAG---KSMSMKLANEIMDAANETGSS 134
>UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7;
n=94; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Zea mays (Maize)
Length = 156
Score = 48.4 bits (110), Expect = 2e-04
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Frame = +3
Query: 252 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 431
A KR K+ RL N ++ +GKK +A +I+ A + I T NPL VL AI
Sbjct: 7 AEKRTAKSDPIFRNRLVNMVVNRIMKDGKKSLAYQILYRAVKKIQQKTETNPLLVLRQAI 66
Query: 432 INSGPRED-STRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVAD 608
P TR + G+ R+ +++ + AI L +++ RN +A ++
Sbjct: 67 RRVTPNIGVKTRRNKKGSTRKVPIEIGSKQGRALAIRWLLEASQKRPGRN---MAFKLSS 123
Query: 609 ELINAAKGSSNSYAIKK 659
EL++AAKGS AI+K
Sbjct: 124 ELVDAAKGSGG--AIRK 138
>UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albicans
IPF3361; n=2; Saccharomycetaceae|Rep: Similar to
CA4785|IPF3361 Candida albicans IPF3361 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 263
Score = 46.8 bits (106), Expect = 5e-04
Identities = 32/133 (24%), Positives = 67/133 (50%)
Frame = +3
Query: 249 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 428
+A+KR P ++ TN +M +GKK A +I+ A I++L T ++PL +L
Sbjct: 118 FANKRIPLPSNPTIDNFTNLIM----RDGKKSKAQKILSRALYIVYLKTRKDPLVILEET 173
Query: 429 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVAD 608
+ P +T++ + G + + V PL++ + + + A+ + + +++
Sbjct: 174 LDKMAPLM-ATKVQKTGAAKNRTVPY-PLKKRQRNRYPITWILEGASKKKSPDYSVRLSE 231
Query: 609 ELINAAKGSSNSY 647
E+I+A +G S+ Y
Sbjct: 232 EIISAYEGKSSGY 244
>UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211;
Bacteria|Rep: 30S ribosomal protein S7 - Streptococcus
pneumoniae
Length = 156
Score = 44.4 bits (100), Expect = 0.002
Identities = 44/126 (34%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = +3
Query: 285 IVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTR 464
+V RL N +M+ +GK+ A IV AFE I TG + L+V TA+ N P + R
Sbjct: 22 LVTRLINRVML----DGKRGTAASIVYGAFEQIKEATGNDALEVFETAMENIMPVLE-VR 76
Query: 465 IGRAGTVRRQA-VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSN 641
R G Q V V P RR + L T AR R T+ + +A E+++AA ++
Sbjct: 77 ARRVGGSNYQVPVKVRPERRTTLGLRWLVTIAR---LRGEHTMQDRLAKEILDAA--NNT 131
Query: 642 SYAIKK 659
A+KK
Sbjct: 132 GAAVKK 137
>UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7;
n=191; Magnoliophyta|Rep: Chloroplast 30S ribosomal
protein S7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 155
Score = 44.4 bits (100), Expect = 0.002
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Frame = +3
Query: 294 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP--REDSTRI 467
RL N L+ +GKK +A +I+ A + I T NPL VL AI P + R+
Sbjct: 21 RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80
Query: 468 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 647
G G+ + +++ + AI L +R+ RN +A ++ EL++AAKGS +
Sbjct: 81 G--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD-- 133
Query: 648 AIKK 659
AI+K
Sbjct: 134 AIRK 137
>UniRef50_A0ARS1 Cluster: 30S ribosomal protein S7; n=3; Poales|Rep:
30S ribosomal protein S7 - Elegia fenestrata
Length = 217
Score = 44.0 bits (99), Expect = 0.003
Identities = 42/136 (30%), Positives = 65/136 (47%)
Frame = +3
Query: 252 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 431
A KR K+ RL N ++ +GKK +A +I A + I T NPL VL AI
Sbjct: 7 AEKRTAKSDPIYRNRLVNMVVNRIMKHGKKALAYQIFYRAAQKIQQ-TETNPLFVLREAI 65
Query: 432 INSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADE 611
P+ +AG R+ +++ P + AI L +R+ +N +A ++ E
Sbjct: 66 RRITPQIGVKARRKAGLTRQVPIEIQPRQAKVLAIRWLLEASRKRPGQN---MAIKLSAE 122
Query: 612 LINAAKGSSNSYAIKK 659
L++AAKG AI+K
Sbjct: 123 LVDAAKGKGG--AIRK 136
>UniRef50_Q9HWD1 Cluster: 30S ribosomal protein S7; n=89;
Bacteria|Rep: 30S ribosomal protein S7 - Pseudomonas
aeruginosa
Length = 156
Score = 41.5 bits (93), Expect = 0.017
Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Frame = +3
Query: 246 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 425
R A KR A ++ M H +GKK +A RIV A + + +PL+
Sbjct: 5 RVAAKREVLADPKYGSQILAKFMNHVMESGKKAVAERIVYGALDKVKERGKADPLETFEK 64
Query: 426 AIINSGPRED--STRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC 599
A+ P + S R+G G + V+V P RR A+ L AR+ R K++A
Sbjct: 65 ALDAIAPLVEVKSRRVG--GATYQVPVEVRPSRRNALAMRWLVDFARK---RGEKSMALR 119
Query: 600 VADELINAAKGSSNSYAIKK 659
+A EL++AA+G A+KK
Sbjct: 120 LAGELLDAAEG--KGAAVKK 137
>UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyces
cerevisiae YJR113c RSM7; n=2; Saccharomycetales|Rep:
Similarities with sp|P47150 Saccharomyces cerevisiae
YJR113c RSM7 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 274
Score = 38.3 bits (85), Expect = 0.16
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Frame = +3
Query: 282 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDST 461
P V+ +TN +M H GKK A +I+ A +H T ++P+++L A+ + P
Sbjct: 139 PTVQHVTNMIMRH----GKKDRAQKIISRALYFLHCKTRKDPVELLKKALDDMAPLM-MV 193
Query: 462 RIGRAGTVRRQAVDVSPL--RRVNQAIW-LLCTGAREAAFRNIKTIAECVADELINAAKG 632
+ G + + V PL R+ N+ W + GA + R A + +EL+ +G
Sbjct: 194 KTFNTGVAKAAVIPV-PLSQRQRNRIAWKWIVEGANK---RVSNDFAVRLGEELVAVYEG 249
Query: 633 SSNSY 647
S+ +
Sbjct: 250 KSSGF 254
>UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 299
Score = 37.5 bits (83), Expect = 0.28
Identities = 30/126 (23%), Positives = 57/126 (45%)
Frame = +3
Query: 282 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDST 461
P +E LTN LM +GKK A R + II +T NPL ++ AI + P
Sbjct: 164 PTLEFLTNLLM----KDGKKAQAQRFITRTLSIISSVTNSNPLPLIHDAIYKAAPLVKVQ 219
Query: 462 RIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSN 641
+ G + V ++ + +A+ + +++ R ++ +A E + +G+S+
Sbjct: 220 SKKQGGKSLQVPVALTQRQSTRKALTWIIEASKKRPDRELE---RRLAAEFLAVVEGTSS 276
Query: 642 SYAIKK 659
+ K+
Sbjct: 277 AIVKKE 282
>UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit
S7; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S7 - Schizosaccharomyces pombe
(Fission yeast)
Length = 259
Score = 37.5 bits (83), Expect = 0.28
Identities = 23/53 (43%), Positives = 28/53 (52%)
Frame = +3
Query: 288 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 446
V+ L N +M +GKK A +IV A II TGENP+ VL AI P
Sbjct: 126 VQHLVNLIM----RDGKKAKAEKIVATALSIIQKETGENPIDVLKQAIAEISP 174
>UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n=3;
Chlorophyceae|Rep: Chloroplast 30S ribosomal protein S7
- Stigeoclonium helveticum (Green alga)
Length = 174
Score = 37.1 bits (82), Expect = 0.37
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Frame = +3
Query: 282 PIVERLTNSLMMHG-RNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDS 458
PI +++ ++++ NGKK +A RIV F I +NP++V A+ N PR +
Sbjct: 16 PIYNKVSVHMLVNRILKNGKKSIAYRIVYSVFRKISETMNQNPVEVWEKALNNVKPRVEV 75
Query: 459 TRIGRAGTVRRQAVDVSPLRRVNQAI---WLLCTGAREA 566
RAG++ +Q V P +AI W++ ++A
Sbjct: 76 KPRRRAGSI-QQVPRVMPSAERARAIAIRWIVSACQKKA 113
>UniRef50_Q2J9E2 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. CcI3|Rep: Putative uncharacterized protein -
Frankia sp. (strain CcI3)
Length = 374
Score = 36.3 bits (80), Expect = 0.65
Identities = 29/99 (29%), Positives = 42/99 (42%)
Frame = +3
Query: 183 SLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIV 362
+LQ + + K A P +A R R + TN L G +G +A+
Sbjct: 93 NLQQELEYRNKVAPVAPAAADRTLRMRVSLHVGSTTDSGTNRL---GDGSGAARIALHRQ 149
Query: 363 KHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAG 479
A + HLL NP LV AI++S ED+ G +G
Sbjct: 150 LDAAAVRHLLEESNPRTTLVAAILSSRAYEDAVLSGYSG 188
>UniRef50_P47150 Cluster: 37S ribosomal protein S7, mitochondrial
precursor; n=4; Saccharomycetaceae|Rep: 37S ribosomal
protein S7, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 247
Score = 36.3 bits (80), Expect = 0.65
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Frame = +3
Query: 288 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 467
++ +TN +M HG KK A I+ A +++ T ++P+Q L ++ P T+
Sbjct: 114 LDHITNMIMRHG----KKEKAQTILSRALYLVYCQTRQDPIQALEKSLDELAPLM-MTKT 168
Query: 468 GRAGTVRRQAVDVSPL--RRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSN 641
G + + V PL R+ N+ W + A R A + +EL AKG+S+
Sbjct: 169 FNTGVAKASVIPV-PLNKRQRNRIAWNWI--VQSANQRVSSDFAVRLGEELTAIAKGTSS 225
Query: 642 SY 647
++
Sbjct: 226 AF 227
>UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD+]
2, mitochondrial precursor; n=37; Saccharomycetales|Rep:
Glycerol-3-phosphate dehydrogenase [NAD+] 2,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 440
Score = 35.9 bits (79), Expect = 0.86
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +3
Query: 27 KVPIMAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISV 206
KV ++ NW +A+ V+ E L PE+++ W +D ++ D +L D I+
Sbjct: 85 KVTVIGSGNWGTTIAK---VIAENTELHSHIFEPEVRM---W-VFDEKIGDENLTDIINT 137
Query: 207 KEKYAKYLPH 236
+ + KYLP+
Sbjct: 138 RHQNVKYLPN 147
>UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 468
Score = 35.1 bits (77), Expect = 1.5
Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Frame = +3
Query: 18 SNRKVPIMAEENWNDDVAEAGSVVVE-TMSLPQAADIPEIKLF--GRWSCYDVQVSDMSL 188
S+ + ++AEENW +A+AG + + MS+ +D+ E+ L+ GR + ++++ D
Sbjct: 201 SDEEEALVAEENWGQSIADAGGYMHKGKMSVWARSDMDEMCLWGAGRGNIGEIELQDH-- 258
Query: 189 QDYISVKEKYAKYLPHSAG 245
+ Y S + K+ + P G
Sbjct: 259 KQYPSSEFKFKTFTPPKTG 277
>UniRef50_Q85FT8 Cluster: Chloroplast 30S ribosomal protein S7; n=2;
Cyanidioschyzon merolae|Rep: Chloroplast 30S ribosomal
protein S7 - Cyanidioschyzon merolae (Red alga)
Length = 148
Score = 34.7 bits (76), Expect = 2.0
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Frame = +3
Query: 294 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPR--EDSTRI 467
RL L++H GKK +A RIV A + I ++ + +L A+ P + R+
Sbjct: 14 RLVELLIVHVLRKGKKSLARRIVYEALKRIEERNQQSGVLMLEQAVSQVMPLVCVKARRV 73
Query: 468 GRAGTVRRQAVDVSPLRRVNQAI-WLLCTGAREAAFRNIKTIAECVADELINAAKGSSNS 644
G G + +V P +N A+ W++ + A R+ K++A +A E+ +AA G+
Sbjct: 74 G--GATYQVPQEVKPYTGINNALRWIV----KYAKDRSGKSMAIKLAAEIWDAAHGTGG- 126
Query: 645 YAIKK 659
AI+K
Sbjct: 127 -AIRK 130
>UniRef50_Q1JY60 Cluster: Multicopper oxidase, type 3 precursor;
n=1; Desulfuromonas acetoxidans DSM 684|Rep: Multicopper
oxidase, type 3 precursor - Desulfuromonas acetoxidans
DSM 684
Length = 782
Score = 33.5 bits (73), Expect = 4.6
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 427 PLSTLDPVKIRLGSVVRVQFVVKPLMFHP 513
PLS D ++IR G VVR V + +M+HP
Sbjct: 507 PLSAGDDIRIRQGEVVRFMMVNRTMMYHP 535
>UniRef50_O96282 Cluster: Putative uncharacterized protein PFB0950w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFB0950w - Plasmodium falciparum
(isolate 3D7)
Length = 307
Score = 33.1 bits (72), Expect = 6.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 626 SCIN*FICNTLCDCFNISECSLTCTCAQKPDCLVDSA 516
SCI IC+ +C C I C +C C+ C+ SA
Sbjct: 215 SCICSCICSCICTCTCICSCLCSCICSCVCSCVCSSA 251
>UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 589
Score = 33.1 bits (72), Expect = 6.1
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +3
Query: 291 ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENP--LQVLVTAIINSGPREDSTR 464
ER ++ L+ + +K + V++ KH FEI+H + G P + VL T +++S R+ +
Sbjct: 477 ERNSSKLLSQRQKQYQKFLHVKM-KHVFEILHSIEGNKPYTMTVLSTLVVDS-LRDGNNP 534
Query: 465 IG 470
IG
Sbjct: 535 IG 536
>UniRef50_P14760 Cluster: Plastid 30S ribosomal protein S7; n=1;
Euglena longa|Rep: Plastid 30S ribosomal protein S7 -
Astasia longa (Euglenophycean alga)
Length = 178
Score = 33.1 bits (72), Expect = 6.1
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +3
Query: 327 NNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPR-EDSTRIGRAGTVRRQAVD 503
+ GKK +A I + + I + ENPL + A+ N+ P E T+ + G + + ++
Sbjct: 32 SKGKKNIARYIFYKSMQNIEKIKNENPLDIFKKAVDNATPSIELRTQKRKKGQISKISIK 91
Query: 504 VSPLRRVNQAIWLLCTGAREAAFRNI 581
RR A+ + A++ + +NI
Sbjct: 92 TKLERRNKIALKFIINSAKKRSEKNI 117
>UniRef50_A6EW85 Cluster: Putative uncharacterized protein; n=1;
Marinobacter algicola DG893|Rep: Putative
uncharacterized protein - Marinobacter algicola DG893
Length = 279
Score = 32.7 bits (71), Expect = 8.0
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +3
Query: 486 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 647
RR+A DV RV W++ T EAAF ++ IA+ A + A KG+S+ +
Sbjct: 47 RRRARDVFATDRVQTNRWIV-TVLDEAAFAELQNIAQAPASRVDAAKKGNSHRH 99
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,808,856
Number of Sequences: 1657284
Number of extensions: 13369926
Number of successful extensions: 35267
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 33367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35034
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -