Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0401
         (660 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U48394-1|AAB61633.1|  228|Drosophila melanogaster M(1)15D protein.    349   3e-96
AY075368-1|AAL68215.1|  228|Drosophila melanogaster GM13047p pro...   349   3e-96
AE014298-2526|AAF48700.1|  228|Drosophila melanogaster CG8922-PA...   349   3e-96
AY071138-1|AAL48760.1|  230|Drosophila melanogaster RE17836p pro...   341   5e-94
AE014297-1922|AAF55116.1|  230|Drosophila melanogaster CG7014-PA...   341   5e-94
L20297-1|AAA28860.1|  685|Drosophila melanogaster neurotrophic r...    31   1.4  
AE014134-1796|AAF52885.1|  685|Drosophila melanogaster CG4926-PA...    31   1.4  

>U48394-1|AAB61633.1|  228|Drosophila melanogaster M(1)15D protein.
          Length = 228

 Score =  349 bits (857), Expect = 3e-96
 Identities = 168/197 (85%), Positives = 182/197 (92%)
 Frame = +3

Query: 69  AEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGR 248
           AE    ++ET ++    ++PEIKLFGRWSC DV V+D+SLQDYISVKEK+A+YLPHSAGR
Sbjct: 21  AEVAETILET-NVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGR 79

Query: 249 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 428
           YA KRFRKAQCPIVERLT SLMM GRNNGKKLMA RIVKH+FEIIHLLTGENPLQ+LV+A
Sbjct: 80  YAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSA 139

Query: 429 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVAD 608
           IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+AD
Sbjct: 140 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLAD 199

Query: 609 ELINAAKGSSNSYAIKK 659
           ELINAAKGSSNSYAIKK
Sbjct: 200 ELINAAKGSSNSYAIKK 216


>AY075368-1|AAL68215.1|  228|Drosophila melanogaster GM13047p
           protein.
          Length = 228

 Score =  349 bits (857), Expect = 3e-96
 Identities = 168/197 (85%), Positives = 182/197 (92%)
 Frame = +3

Query: 69  AEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGR 248
           AE    ++ET ++    ++PEIKLFGRWSC DV V+D+SLQDYISVKEK+A+YLPHSAGR
Sbjct: 21  AEVAETILET-NVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGR 79

Query: 249 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 428
           YA KRFRKAQCPIVERLT SLMM GRNNGKKLMA RIVKH+FEIIHLLTGENPLQ+LV+A
Sbjct: 80  YAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSA 139

Query: 429 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVAD 608
           IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+AD
Sbjct: 140 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLAD 199

Query: 609 ELINAAKGSSNSYAIKK 659
           ELINAAKGSSNSYAIKK
Sbjct: 200 ELINAAKGSSNSYAIKK 216


>AE014298-2526|AAF48700.1|  228|Drosophila melanogaster CG8922-PA
           protein.
          Length = 228

 Score =  349 bits (857), Expect = 3e-96
 Identities = 168/197 (85%), Positives = 182/197 (92%)
 Frame = +3

Query: 69  AEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGR 248
           AE    ++ET ++    ++PEIKLFGRWSC DV V+D+SLQDYISVKEK+A+YLPHSAGR
Sbjct: 21  AEVAETILET-NVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGR 79

Query: 249 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 428
           YA KRFRKAQCPIVERLT SLMM GRNNGKKLMA RIVKH+FEIIHLLTGENPLQ+LV+A
Sbjct: 80  YAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSA 139

Query: 429 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVAD 608
           IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+AD
Sbjct: 140 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLAD 199

Query: 609 ELINAAKGSSNSYAIKK 659
           ELINAAKGSSNSYAIKK
Sbjct: 200 ELINAAKGSSNSYAIKK 216


>AY071138-1|AAL48760.1|  230|Drosophila melanogaster RE17836p
           protein.
          Length = 230

 Score =  341 bits (838), Expect = 5e-94
 Identities = 163/205 (79%), Positives = 181/205 (88%)
 Frame = +3

Query: 45  EENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAK 224
           +E+W DDV       V TM   +  + PEIKLFGRW+C D+ +SD+SLQDYI+VKEK+A+
Sbjct: 21  QEDWADDV-------VTTMPAQEVTEWPEIKLFGRWACDDISISDISLQDYIAVKEKFAR 73

Query: 225 YLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGEN 404
           YLPHSAGRYA KRFRKAQCPIVERLT+ LMM GR+NGKKL+A RIVKHAFEIIHLLT EN
Sbjct: 74  YLPHSAGRYAAKRFRKAQCPIVERLTSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSEN 133

Query: 405 PLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIK 584
           PLQV V AI+NSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWL+CTGAREAAFRNIK
Sbjct: 134 PLQVTVNAIVNSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLICTGAREAAFRNIK 193

Query: 585 TIAECVADELINAAKGSSNSYAIKK 659
           T+AEC+ADELINAAKGSSNSYAIKK
Sbjct: 194 TVAECLADELINAAKGSSNSYAIKK 218


>AE014297-1922|AAF55116.1|  230|Drosophila melanogaster CG7014-PA
           protein.
          Length = 230

 Score =  341 bits (838), Expect = 5e-94
 Identities = 163/205 (79%), Positives = 181/205 (88%)
 Frame = +3

Query: 45  EENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAK 224
           +E+W DDV       V TM   +  + PEIKLFGRW+C D+ +SD+SLQDYI+VKEK+A+
Sbjct: 21  QEDWADDV-------VTTMPAQEVTEWPEIKLFGRWACDDISISDISLQDYIAVKEKFAR 73

Query: 225 YLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGEN 404
           YLPHSAGRYA KRFRKAQCPIVERLT+ LMM GR+NGKKL+A RIVKHAFEIIHLLT EN
Sbjct: 74  YLPHSAGRYAAKRFRKAQCPIVERLTSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSEN 133

Query: 405 PLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIK 584
           PLQV V AI+NSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWL+CTGAREAAFRNIK
Sbjct: 134 PLQVTVNAIVNSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLICTGAREAAFRNIK 193

Query: 585 TIAECVADELINAAKGSSNSYAIKK 659
           T+AEC+ADELINAAKGSSNSYAIKK
Sbjct: 194 TVAECLADELINAAKGSSNSYAIKK 218


>L20297-1|AAA28860.1|  685|Drosophila melanogaster neurotrophic
           receptor protein.
          Length = 685

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = -2

Query: 227 IFCVLLFNGNVVLQRHIRDLHIVATPSAEKLDFRN 123
           IF ++LF    ++   +R++H + TPSA+K  + N
Sbjct: 332 IFAIILFKRRTIMHYGMRNIHNINTPSADKNIYGN 366


>AE014134-1796|AAF52885.1|  685|Drosophila melanogaster CG4926-PA
           protein.
          Length = 685

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = -2

Query: 227 IFCVLLFNGNVVLQRHIRDLHIVATPSAEKLDFRN 123
           IF ++LF    ++   +R++H + TPSA+K  + N
Sbjct: 332 IFAIILFKRRTIMHYGMRNIHNINTPSADKNIYGN 366


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,957,222
Number of Sequences: 53049
Number of extensions: 650288
Number of successful extensions: 1666
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1664
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)