Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0399
         (644 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF434174-1|ABO26294.1|  866|Drosophila melanogaster AGO3 protein.      29   4.1  
EF428975-1|ABO20847.1| 2381|Drosophila melanogaster Kon-tiki pro...    29   4.1  
AE014296-3774|ABI31274.1|  732|Drosophila melanogaster CG40300-P...    29   4.1  
AE014296-3773|ABI31275.1|  732|Drosophila melanogaster CG40300-P...    29   4.1  
AE014296-3772|EAA45981.2|  732|Drosophila melanogaster CG40300-P...    29   4.1  
AE014134-2938|AAF53672.2| 2355|Drosophila melanogaster CG10275-P...    29   4.1  
AE013599-2602|AAF57762.1|  157|Drosophila melanogaster CG14495-P...    29   5.4  
BT015288-1|AAT94517.1| 1291|Drosophila melanogaster GH16847p pro...    29   7.1  
AE014296-3522|AAF51710.1| 1291|Drosophila melanogaster CG7324-PA...    29   7.1  
AE014298-2363|AAF48588.1| 1061|Drosophila melanogaster CG13957-P...    28   9.4  

>EF434174-1|ABO26294.1|  866|Drosophila melanogaster AGO3 protein.
          Length = 866

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 139 GQNLVSGHHIHLDITATLQHGIVNTTRSAAFVV 41
           G+ L+S H+I  D+  TLQH  ++  R  A ++
Sbjct: 42  GERLLSSHNIETDLITTLQHVNISVGRGRARLI 74


>EF428975-1|ABO20847.1| 2381|Drosophila melanogaster Kon-tiki
           protein.
          Length = 2381

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = +1

Query: 148 GAFRVLDVNMFNI----REPSRKSYKL*TMTS*FERFSCWVMSGVS 273
           G  RVLDV++FNI     EP    Y +    S  E F C+++ G +
Sbjct: 582 GIERVLDVDLFNIDDPDSEPGNLIYTILPTQSPQETFGCFIVGGAT 627


>AE014296-3774|ABI31274.1|  732|Drosophila melanogaster CG40300-PC,
           isoform C protein.
          Length = 732

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 139 GQNLVSGHHIHLDITATLQHGIVNTTRSAAFVV 41
           G+ L+S H+I  D+  TLQH  ++  R  A ++
Sbjct: 42  GERLLSSHNIETDLITTLQHVNISVGRGRARLI 74


>AE014296-3773|ABI31275.1|  732|Drosophila melanogaster CG40300-PB,
           isoform B protein.
          Length = 732

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 139 GQNLVSGHHIHLDITATLQHGIVNTTRSAAFVV 41
           G+ L+S H+I  D+  TLQH  ++  R  A ++
Sbjct: 42  GERLLSSHNIETDLITTLQHVNISVGRGRARLI 74


>AE014296-3772|EAA45981.2|  732|Drosophila melanogaster CG40300-PA,
           isoform A protein.
          Length = 732

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 139 GQNLVSGHHIHLDITATLQHGIVNTTRSAAFVV 41
           G+ L+S H+I  D+  TLQH  ++  R  A ++
Sbjct: 42  GERLLSSHNIETDLITTLQHVNISVGRGRARLI 74


>AE014134-2938|AAF53672.2| 2355|Drosophila melanogaster CG10275-PA
           protein.
          Length = 2355

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = +1

Query: 148 GAFRVLDVNMFNI----REPSRKSYKL*TMTS*FERFSCWVMSGVS 273
           G  RVLDV++FNI     EP    Y +    S  E F C+++ G +
Sbjct: 556 GIERVLDVDLFNIDDPDSEPGNLIYTILPTQSPQETFGCFIVGGAT 601


>AE013599-2602|AAF57762.1|  157|Drosophila melanogaster CG14495-PA
           protein.
          Length = 157

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 577 ILLNECRDSFTIACKNAT 630
           + ++EC D FTIAC NA+
Sbjct: 11  LTIDECHDEFTIACANAS 28


>BT015288-1|AAT94517.1| 1291|Drosophila melanogaster GH16847p
           protein.
          Length = 1291

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 112 YDVHLRDFGLGNGAFRVLDV 171
           ++ H RDFG G G FR  DV
Sbjct: 436 WEAHFRDFGRGIGMFRTTDV 455


>AE014296-3522|AAF51710.1| 1291|Drosophila melanogaster CG7324-PA
           protein.
          Length = 1291

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 112 YDVHLRDFGLGNGAFRVLDV 171
           ++ H RDFG G G FR  DV
Sbjct: 436 WEAHFRDFGRGIGMFRTTDV 455


>AE014298-2363|AAF48588.1| 1061|Drosophila melanogaster CG13957-PA
           protein.
          Length = 1061

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = -1

Query: 242 LSNYDVIVHNL*LFLEGSRILNILTSRTRNAPFPRPKSRKWTSYPLGYHS 93
           L+ + V+VH L + +EG  + N++    R+   P  +S  W+  P G+ S
Sbjct: 256 LTTFVVVVHELGIQMEGKLVKNVIDLVARHKQVPLNRSVFWS--PSGFLS 303


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,949,124
Number of Sequences: 53049
Number of extensions: 545770
Number of successful extensions: 1074
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)