Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0398
         (709 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B498F Cluster: PREDICTED: similar to conserved ...    80   5e-14
UniRef50_UPI0000DB76A9 Cluster: PREDICTED: similar to PEST-conta...    80   5e-14
UniRef50_A0NGI5 Cluster: ENSANGP00000030335; n=3; Eumetazoa|Rep:...    66   6e-10
UniRef50_UPI0000D56B78 Cluster: PREDICTED: similar to PEST-conta...    58   2e-07
UniRef50_Q8WW12 Cluster: PEST proteolytic signal-containing nucl...    57   4e-07
UniRef50_UPI0000D9E6E9 Cluster: PREDICTED: similar to PEST-conta...    56   9e-07
UniRef50_Q4SHT6 Cluster: Chromosome 5 SCAF14581, whole genome sh...    53   6e-06
UniRef50_Q5BRA9 Cluster: SJCHGC08807 protein; n=1; Schistosoma j...    46   0.001
UniRef50_UPI0000E47DC4 Cluster: PREDICTED: hypothetical protein;...    42   0.015
UniRef50_A0UXC9 Cluster: Amino acid adenylation domain; n=2; Bac...    35   1.7  
UniRef50_Q4DTA3 Cluster: Putative uncharacterized protein; n=2; ...    33   9.1  
UniRef50_Q7SFJ4 Cluster: Putative uncharacterized protein NCU086...    33   9.1  
UniRef50_A6R5Y7 Cluster: Predicted protein; n=8; Eurotiomycetida...    33   9.1  

>UniRef50_UPI00015B498F Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to conserved hypothetical protein -
           Nasonia vitripennis
          Length = 176

 Score = 80.2 bits (189), Expect = 5e-14
 Identities = 34/42 (80%), Positives = 39/42 (92%)
 Frame = +1

Query: 547 NIGRETPTSAGPNSFGKTKQGFCDAKKVFEKNLKEALETVDK 672
           NIGRETPTSAGPNSFGKTKQGFCD+KK+FEK LK+A+E  +K
Sbjct: 135 NIGRETPTSAGPNSFGKTKQGFCDSKKIFEKTLKKAMEEANK 176


>UniRef50_UPI0000DB76A9 Cluster: PREDICTED: similar to
           PEST-containing nuclear protein (PCNP); n=1; Apis
           mellifera|Rep: PREDICTED: similar to PEST-containing
           nuclear protein (PCNP) - Apis mellifera
          Length = 159

 Score = 80.2 bits (189), Expect = 5e-14
 Identities = 34/42 (80%), Positives = 39/42 (92%)
 Frame = +1

Query: 547 NIGRETPTSAGPNSFGKTKQGFCDAKKVFEKNLKEALETVDK 672
           NIGRETPTSAGPNSFGKTKQGFCD+KK+FEK LK+A+E  +K
Sbjct: 118 NIGRETPTSAGPNSFGKTKQGFCDSKKIFEKTLKKAMEEANK 159


>UniRef50_A0NGI5 Cluster: ENSANGP00000030335; n=3; Eumetazoa|Rep:
           ENSANGP00000030335 - Anopheles gambiae str. PEST
          Length = 101

 Score = 66.5 bits (155), Expect = 6e-10
 Identities = 27/37 (72%), Positives = 33/37 (89%)
 Frame = +1

Query: 547 NIGRETPTSAGPNSFGKTKQGFCDAKKVFEKNLKEAL 657
           NIGR+TPTS+GPNSFGKTK GFCD+KK+FEK +  +L
Sbjct: 62  NIGRDTPTSSGPNSFGKTKHGFCDSKKMFEKKIGSSL 98


>UniRef50_UPI0000D56B78 Cluster: PREDICTED: similar to
           PEST-containing nuclear protein (PCNP); n=1; Tribolium
           castaneum|Rep: PREDICTED: similar to PEST-containing
           nuclear protein (PCNP) - Tribolium castaneum
          Length = 124

 Score = 58.0 bits (134), Expect = 2e-07
 Identities = 25/39 (64%), Positives = 32/39 (82%)
 Frame = +1

Query: 547 NIGRETPTSAGPNSFGKTKQGFCDAKKVFEKNLKEALET 663
           NIGR+TPTS+GPNSFGKTKQGF ++KK F+++   A  T
Sbjct: 84  NIGRDTPTSSGPNSFGKTKQGFSESKKPFDQSPDRANNT 122


>UniRef50_Q8WW12 Cluster: PEST proteolytic signal-containing nuclear
           protein; n=36; Euteleostomi|Rep: PEST proteolytic
           signal-containing nuclear protein - Homo sapiens (Human)
          Length = 178

 Score = 57.2 bits (132), Expect = 4e-07
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = +1

Query: 547 NIGRETPTSAGPNSFGKTKQGFCDAKKVFEKNLKEALETV 666
           NIGR+TPTSAGPNSF K K GF D +K++E+N+K  L  V
Sbjct: 134 NIGRDTPTSAGPNSFNKGKHGFSDNQKLWERNIKSHLGNV 173


>UniRef50_UPI0000D9E6E9 Cluster: PREDICTED: similar to
           PEST-containing nuclear protein (PCNP); n=4;
           Eutheria|Rep: PREDICTED: similar to PEST-containing
           nuclear protein (PCNP) - Macaca mulatta
          Length = 150

 Score = 56.0 bits (129), Expect = 9e-07
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = +1

Query: 547 NIGRETPTSAGPNSFGKTKQGFCDAKKVFEKNLKEALETV 666
           NIGR+TPTSAGPNSF K K GF D ++++E+N+K  L  V
Sbjct: 106 NIGRDTPTSAGPNSFSKGKHGFSDNQRLWERNIKSHLGNV 145


>UniRef50_Q4SHT6 Cluster: Chromosome 5 SCAF14581, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 5 SCAF14581, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 172

 Score = 53.2 bits (122), Expect = 6e-06
 Identities = 22/34 (64%), Positives = 28/34 (82%)
 Frame = +1

Query: 547 NIGRETPTSAGPNSFGKTKQGFCDAKKVFEKNLK 648
           NIGRETPTSAGPNSF K K GF D ++++E+ +K
Sbjct: 137 NIGRETPTSAGPNSFNKGKHGFSDNQRLWERKIK 170


>UniRef50_Q5BRA9 Cluster: SJCHGC08807 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC08807 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 67

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 20/42 (47%), Positives = 26/42 (61%)
 Frame = +1

Query: 547 NIGRETPTSAGPNSFGKTKQGFCDAKKVFEKNLKEALETVDK 672
           N+GR TPTS GPNSFGK + GF D + +  K  +   E V +
Sbjct: 22  NLGRYTPTSCGPNSFGKGRFGFVDRRALLNKQTEALNEAVSE 63


>UniRef50_UPI0000E47DC4 Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 154

 Score = 41.9 bits (94), Expect = 0.015
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +1

Query: 547 NIGRETPTSAGPNSFGKTKQGF 612
           N+GR+TPTSAGPNSF K K GF
Sbjct: 104 NMGRDTPTSAGPNSFNKGKMGF 125


>UniRef50_A0UXC9 Cluster: Amino acid adenylation domain; n=2;
            Bacteria|Rep: Amino acid adenylation domain - Clostridium
            cellulolyticum H10
          Length = 3695

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = -2

Query: 183  PVPLILPRIIT-RGSRRPFAVEGVTTAHSCFFFTFVTIVLNLTLVGTYFVQFKRITS 16
            PV    P++ T  GS   F+++G TTA    F     I LN+ L+  YFV  K+IT+
Sbjct: 1771 PVDYKRPQMQTYNGSFIKFSIDGNTTAKLKEFARQHNITLNMALLSAYFVLLKKITA 1827


>UniRef50_Q4DTA3 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 531

 Score = 32.7 bits (71), Expect = 9.1
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
 Frame = -2

Query: 384 GNTRRWRWCWYLIIFPLFWRIANISFFMFFPISVPGARRTLCRVIPLWRVFPW*PGS*TR 205
           G   R ++CW L++  +F+ +    F +F P   P A     R++P WR F     +  +
Sbjct: 62  GRDMRLKFCWLLLLIIVFY-VLTFEFVLFLPPVAPRA-----RLVP-WRSFDSLAMAPRK 114

Query: 204 TLSTSM---FPVPL 172
              T+M   FPVPL
Sbjct: 115 KRDTAMYHHFPVPL 128


>UniRef50_Q7SFJ4 Cluster: Putative uncharacterized protein
           NCU08625.1; n=1; Neurospora crassa|Rep: Putative
           uncharacterized protein NCU08625.1 - Neurospora crassa
          Length = 495

 Score = 32.7 bits (71), Expect = 9.1
 Identities = 17/61 (27%), Positives = 33/61 (54%)
 Frame = +2

Query: 77  VTKVKKKQE*AVVTPSTAKGRLDPRVMILGSMRGTGNIEVESVRVQDPGHQGNTLQRGIT 256
           V   ++K+   VV  +     +DPR +IL +++  G  E +++ V   GH+G TL + + 
Sbjct: 311 VKLAREKEGKKVVVVAQGTVEIDPRHLILPTIQALGGREEDTLVVAILGHRGRTLPKDVV 370

Query: 257 L 259
           +
Sbjct: 371 V 371


>UniRef50_A6R5Y7 Cluster: Predicted protein; n=8;
           Eurotiomycetidae|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 717

 Score = 32.7 bits (71), Expect = 9.1
 Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 3/129 (2%)
 Frame = -2

Query: 546 PHSHSGFSRHLFRFVIIIISIKHGRHTRFRSGFRSSI*VHLNGSFRFIEANRYFGNTRRW 367
           P +  GF+       I+++S+   R    +  +   + VHL     F+ A  Y       
Sbjct: 209 PITQRGFASWCILTFIVLVSVAPVR----KLSYEIFVLVHLLTFAGFLAAVWYHAQDEVK 264

Query: 366 RWCWYLIIFPLFWRIANISFFMFFPISVPGARRTLCRVIPLW---RVFPW*PGS*TRTLS 196
            W W  I   +F R+A +S  ++  +S+    R      PLW     F   PG+ TR   
Sbjct: 265 EWVWISIGLVVFGRLARLSVVLYSNLSIFHGLRGAKTSRPLWANKTTFTPLPGNVTRI-- 322

Query: 195 TSMFPVPLI 169
             + P PLI
Sbjct: 323 --VVPNPLI 329


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,087,506
Number of Sequences: 1657284
Number of extensions: 11152366
Number of successful extensions: 33432
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 32254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33396
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)