Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0398
         (709 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    27   0.20 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.6  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   5.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   5.6  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   9.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.8  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   9.8  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   9.8  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -2

Query: 492 ISIKHGRHTRFRSGFRSSI*VHLNGSFRFIEANRYFG 382
           +S+K G +T  R    SS+ +    +FR ++ANR  G
Sbjct: 531 VSLKQGTNTITRHSTESSLTIPFERTFRNLDANRPTG 567


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -2

Query: 693  WEIGQCWLVHC 661
            WE  +CW V C
Sbjct: 1519 WEYPKCWQVDC 1529



 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -2

Query: 693  WEIGQCWLVHC 661
            WE  +CW V C
Sbjct: 1944 WEYPKCWQVDC 1954



 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -2

Query: 693  WEIGQCWLVHC 661
            WE  +CW V C
Sbjct: 2442 WEYPKCWQVDC 2452


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 56  KVKFRTIVTKVKKKQE*AVVTPSTA 130
           K+ F+    K KK+++  VVTP T+
Sbjct: 130 KIWFQNRRMKFKKEEKNKVVTPKTS 154


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 56  KVKFRTIVTKVKKKQE*AVVTPSTA 130
           K+ F+    K KK+++  VVTP T+
Sbjct: 150 KIWFQNRRMKFKKEEKNKVVTPKTS 174


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +1

Query: 283 DRDRKEHEKRNIRNSPEQWEDDE 351
           D D K+ +K+  +   E++ +DE
Sbjct: 255 DEDTKKEDKKKKKTIKEKYTEDE 277


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +2

Query: 602 SKASATLRKYLRRTSKKHWRQWTSQ 676
           SK   T R+   R  K H  QWT Q
Sbjct: 35  SKLLYTYRQPYPRQKKSHPPQWTWQ 59


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -2

Query: 525 SRHLFRFVIIIISIKH 478
           +RH+FR  +++I + H
Sbjct: 125 NRHIFRTSVLLIFVMH 140


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -2

Query: 525 SRHLFRFVIIIISIKH 478
           +RH+FR  +++I + H
Sbjct: 125 NRHIFRTSVLLIFVMH 140


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,698
Number of Sequences: 336
Number of extensions: 2835
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)