Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0398
         (709 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   4.1  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   4.1  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   5.4  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   7.1  

>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 105 HSCFFFTFVTIVLNLTLVGTYFVQFKRITS 16
           ++ F   F+ I+  L L+GTY   F  I+S
Sbjct: 349 YTTFTLVFMFIIPLLILIGTYLSTFMTISS 378


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 105 HSCFFFTFVTIVLNLTLVGTYFVQFKRITS 16
           ++ F   F+ I+  L L+GTY   F  I+S
Sbjct: 350 YTTFTLVFMFIIPLLILIGTYLSTFMTISS 379


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 502 HHHHQY*TRTPHSVSER 452
           HHHH + ++  HS S R
Sbjct: 188 HHHHPHHSQQQHSASPR 204


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 526 QPASLQVRHHHHQY 485
           QPA+    HHHH +
Sbjct: 149 QPAAAAAMHHHHHH 162


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,382
Number of Sequences: 2352
Number of extensions: 10979
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)