Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0398
         (709 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC022001-1|AAH22001.1|  178|Homo sapiens PEST proteolytic signal...    57   5e-08
AB037675-1|BAB03501.1|  178|Homo sapiens PEST-containing nuclear...    57   5e-08
AK222978-1|BAD96698.1|  178|Homo sapiens PEST-containing nuclear...    56   2e-07
EF043567-1|ABK34282.1|  355|Homo sapiens neurotrimin variant 3 p...    30   9.3  
BC050716-1|AAH50716.1|  316|Homo sapiens HNT protein protein.          30   9.3  
AY358331-1|AAQ88697.1|  344|Homo sapiens HNT protein.                  30   9.3  
AF126426-1|AAF37591.1|  344|Homo sapiens neurotrimin protein.          30   9.3  

>BC022001-1|AAH22001.1|  178|Homo sapiens PEST proteolytic signal
           containing nuclear protein protein.
          Length = 178

 Score = 57.2 bits (132), Expect = 5e-08
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = +1

Query: 547 NIGRETPTSAGPNSFGKTKQGFCDAKKVFEKNLKEALETV 666
           NIGR+TPTSAGPNSF K K GF D +K++E+N+K  L  V
Sbjct: 134 NIGRDTPTSAGPNSFNKGKHGFSDNQKLWERNIKSHLGNV 173


>AB037675-1|BAB03501.1|  178|Homo sapiens PEST-containing nuclear
           protein protein.
          Length = 178

 Score = 57.2 bits (132), Expect = 5e-08
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = +1

Query: 547 NIGRETPTSAGPNSFGKTKQGFCDAKKVFEKNLKEALETV 666
           NIGR+TPTSAGPNSF K K GF D +K++E+N+K  L  V
Sbjct: 134 NIGRDTPTSAGPNSFNKGKHGFSDNQKLWERNIKSHLGNV 173


>AK222978-1|BAD96698.1|  178|Homo sapiens PEST-containing nuclear
           protein variant protein.
          Length = 178

 Score = 55.6 bits (128), Expect = 2e-07
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = +1

Query: 547 NIGRETPTSAGPNSFGKTKQGFCDAKKVFEKNLKEALETV 666
           NIGR+TPTSAGPNSF + K GF D +K++E+N+K  L  V
Sbjct: 134 NIGRDTPTSAGPNSFNEGKHGFSDNQKLWERNIKSHLGNV 173


>EF043567-1|ABK34282.1|  355|Homo sapiens neurotrimin variant 3
           protein.
          Length = 355

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = +2

Query: 77  VTKVKKKQE*AVVTPSTAKGRLDPRVMILGSMRGTGNIEVESVRVQDPG 223
           VT+V       ++     K  LDPRV++L + +   +IE+++V V D G
Sbjct: 63  VTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEG 111


>BC050716-1|AAH50716.1|  316|Homo sapiens HNT protein protein.
          Length = 316

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = +2

Query: 77  VTKVKKKQE*AVVTPSTAKGRLDPRVMILGSMRGTGNIEVESVRVQDPG 223
           VT+V       ++     K  LDPRV++L + +   +IE+++V V D G
Sbjct: 63  VTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEG 111


>AY358331-1|AAQ88697.1|  344|Homo sapiens HNT protein.
          Length = 344

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = +2

Query: 77  VTKVKKKQE*AVVTPSTAKGRLDPRVMILGSMRGTGNIEVESVRVQDPG 223
           VT+V       ++     K  LDPRV++L + +   +IE+++V V D G
Sbjct: 63  VTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEG 111


>AF126426-1|AAF37591.1|  344|Homo sapiens neurotrimin protein.
          Length = 344

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = +2

Query: 77  VTKVKKKQE*AVVTPSTAKGRLDPRVMILGSMRGTGNIEVESVRVQDPG 223
           VT+V       ++     K  LDPRV++L + +   +IE+++V V D G
Sbjct: 63  VTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEG 111


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,491,889
Number of Sequences: 237096
Number of extensions: 1691621
Number of successful extensions: 7538
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7534
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)