Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0398
(709 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 26 0.30
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 26 0.30
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 26 0.30
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 26 0.30
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 26 0.30
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 26 0.30
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 25 0.53
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 25 0.53
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 2.1
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 22 5.0
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 5.0
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 22 6.6
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 26.2 bits (55), Expect = 0.30
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 76 CYKSEEKTRMSGRNPLYSKGSSRSTRDDSRKYER 177
C+ E +R RN + G +RD SR+Y++
Sbjct: 230 CHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKK 263
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 26.2 bits (55), Expect = 0.30
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 76 CYKSEEKTRMSGRNPLYSKGSSRSTRDDSRKYER 177
C+ E +R RN + G +RD SR+Y++
Sbjct: 230 CHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKK 263
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 26.2 bits (55), Expect = 0.30
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 76 CYKSEEKTRMSGRNPLYSKGSSRSTRDDSRKYER 177
C+ E +R RN + G +RD SR+Y++
Sbjct: 230 CHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKK 263
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 26.2 bits (55), Expect = 0.30
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 76 CYKSEEKTRMSGRNPLYSKGSSRSTRDDSRKYER 177
C+ E +R RN + G +RD SR+Y++
Sbjct: 230 CHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKK 263
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 26.2 bits (55), Expect = 0.30
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 76 CYKSEEKTRMSGRNPLYSKGSSRSTRDDSRKYER 177
C+ E +R RN + G +RD SR+Y++
Sbjct: 230 CHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKK 263
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 26.2 bits (55), Expect = 0.30
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 76 CYKSEEKTRMSGRNPLYSKGSSRSTRDDSRKYER 177
C+ E +R RN + G +RD SR+Y++
Sbjct: 230 CHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKK 263
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.53
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 76 CYKSEEKTRMSGRNPLYSKGSSRSTRDDSRKYER 177
C+ E R RN + G +RD SR+Y++
Sbjct: 230 CHSRYEDLRHEDRNSYRNDGERSCSRDRSREYKK 263
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 25.4 bits (53), Expect = 0.53
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 300 FFPISVPGARRTLCRVIPLWRVFPW*P 220
F P+S+ G + P+WR PW P
Sbjct: 534 FSPLSLLGGPLVMVCSAPVWRFQPWGP 560
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +1
Query: 76 CYKSEEKTRMSGRNPLYSKGSSRSTRDDSRKYER 177
C+ E +R N + G +RD SR+Y++
Sbjct: 230 CHSRYEDSRHEDGNSYRNDGERSCSRDRSREYKK 263
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 11 RHEVILLNCTKYVPTKVKFRTIVTK 85
R + L C + P + KFR ++TK
Sbjct: 84 REASVSLFCPRAKPGEKKFRKVITK 108
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 581 QIHLAKQSKASATL 622
+ HLAK+ KAS TL
Sbjct: 361 RFHLAKERKASTTL 374
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.8 bits (44), Expect = 6.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3
Query: 467 LGFGAGLEAAFRFILMGALGLLKP 396
L + GLE+ IL LG LKP
Sbjct: 206 LAYKMGLESTCTLILGRHLGFLKP 229
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,585
Number of Sequences: 438
Number of extensions: 3767
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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