Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0396
         (630 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    24   0.91 
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    24   0.91 
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    24   0.91 
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   2.1  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   2.1  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   4.9  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 74  QVSKWFQSSVLAAQFEKKKE 133
           Q+SKW + S  A + +K+ E
Sbjct: 18  QISKWLRGSARAQEIQKRSE 37



 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 473 TLQNSRSKISAIKNTITNCSYYII 402
           T  NS+S     K+   NCS YII
Sbjct: 201 TASNSKSTKVLFKDVDRNCSAYII 224


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 74  QVSKWFQSSVLAAQFEKKKE 133
           Q+SKW + S  A + +K+ E
Sbjct: 18  QISKWLRGSARAQEIQKRSE 37



 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 473 TLQNSRSKISAIKNTITNCSYYII 402
           T  NS+S     K+   NCS YII
Sbjct: 201 TASNSKSTKVLFKDVDRNCSAYII 224


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 74  QVSKWFQSSVLAAQFEKKKE 133
           Q+SKW + S  A + +K+ E
Sbjct: 18  QISKWLRGSARAQEIQKRSE 37



 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 473 TLQNSRSKISAIKNTITNCSYYII 402
           T  NS+S     K+   NCS YII
Sbjct: 201 TASNSKSTKVLFKDVDRNCSAYII 224


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/23 (30%), Positives = 17/23 (73%)
 Frame = -2

Query: 440 IKNTITNCSYYIILINQLSLTII 372
           I +T+T+ + Y++++ Q  LT++
Sbjct: 391 ISSTVTSIATYLVMLMQFRLTLM 413


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/23 (30%), Positives = 17/23 (73%)
 Frame = -2

Query: 440 IKNTITNCSYYIILINQLSLTII 372
           I +T+T+ + Y++++ Q  LT++
Sbjct: 391 ISSTVTSIATYLVMLMQFRLTLM 413


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 78  FQNGFSHRYSPHSL 119
           F  GFSHR  P S+
Sbjct: 186 FMTGFSHRNQPTSI 199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,805
Number of Sequences: 336
Number of extensions: 2638
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)