Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0396
         (630 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    25   0.46 
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   2.4  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   9.9  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   9.9  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   9.9  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 283 SQVRNRRITKSNDETHHISRQNKYYN*N 200
           S+  N+   + ND+ HH S+ N  +N N
Sbjct: 436 SKSDNQNNNQHNDQAHHSSKSNNRHNNN 463


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -3

Query: 325 GTNSICFIRNNHI*SQVRNRRITKSNDETHHISRQNK 215
           G N    IRN H  +  +N  I  +N++  +  + NK
Sbjct: 402 GANVKELIRNTHCVNNNQNDNIQNTNNQNDNNQKNNK 438


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 567 RCFHWLVDKS 538
           RC H+ VDKS
Sbjct: 140 RCLHYTVDKS 149


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 567 RCFHWLVDKS 538
           RC H+ VDKS
Sbjct: 145 RCLHYTVDKS 154


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 567 RCFHWLVDKS 538
           RC H+ VDKS
Sbjct: 145 RCLHYTVDKS 154


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,502
Number of Sequences: 438
Number of extensions: 2895
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)