Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0394
         (703 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22C90 Cluster: Putative uncharacterized protein; n=1; ...    34   3.9  
UniRef50_Q1FG15 Cluster: Low molecular weight phosphotyrosine pr...    33   5.1  
UniRef50_UPI0000498B45 Cluster: hypothetical protein 127.t00001;...    33   6.8  

>UniRef50_Q22C90 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1007

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +3

Query: 462 KTNLKGQKSHLLFWLEKKNKFGYHMLFLVKNKRYRNCINARDSYIDASRFSEINY 626
           K +   +K HLLF+  K +   Y  L LV++    N +     ++    FSEIN+
Sbjct: 661 KLSSDSKKEHLLFFTNKNSLVFYPSLDLVEDNEVNNRLKNSQIFVVKQEFSEINF 715


>UniRef50_Q1FG15 Cluster: Low molecular weight phosphotyrosine
           protein phosphatase; n=1; Clostridium phytofermentans
           ISDg|Rep: Low molecular weight phosphotyrosine protein
           phosphatase - Clostridium phytofermentans ISDg
          Length = 151

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 20/60 (33%), Positives = 32/60 (53%)
 Frame = -2

Query: 567 SYNVCFSLKIACGIQICFFFPTKKVDEIFDL*DSFSIELLRWEECFDRLFLLKQYTL*EL 388
           +Y     L +  GI+   +   + V EI D+ D +   LL +EECF+ L LL + T+ +L
Sbjct: 88  TYKQKLKLMLDYGIESNIYSIKEYVGEIGDVVDPYGGTLLDYEECFEELALLVKKTMYQL 147


>UniRef50_UPI0000498B45 Cluster: hypothetical protein 127.t00001;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 127.t00001 - Entamoeba histolytica HM-1:IMSS
          Length = 581

 Score = 33.1 bits (72), Expect = 6.8
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -2

Query: 372 CYSFAWDGILVNLGLSPIFPERIQSIYR 289
           CYS  WDG L +L  SP+F E    +Y+
Sbjct: 31  CYSHVWDGHLRHLSNSPLFSEDKNQVYK 58


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,795,631
Number of Sequences: 1657284
Number of extensions: 11186459
Number of successful extensions: 21820
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21819
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)