Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0391
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   1.8  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   2.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.8  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.8  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.8  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   9.8  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +3

Query: 186 PGPTESYLRHHPNPAMRAPP 245
           P  T  Y R+HP P    PP
Sbjct: 167 PVYTHHYARYHPYPNFGVPP 186


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +3

Query: 33  TSIPTSVTMSLNPNFFPNGYQDPKHPEEEVVSNWPY 140
           T  PTSV   L P+  P     P  P    +++ PY
Sbjct: 312 TPTPTSVMTELYPSPVPGHSTSPNLPLTHNIAHNPY 347


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 267 LMKQKVLHKQFNSP 308
           L +Q +LH+QFN P
Sbjct: 628 LDRQGLLHRQFNLP 641


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +3

Query: 81  PNGYQDPKHPEEEVVSNWP 137
           PN    P  PEEE  S  P
Sbjct: 39  PNSAASPAPPEEEAASPTP 57


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 251 VVRRCPHCWV 222
           VV   PHCWV
Sbjct: 485 VVEGNPHCWV 494


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 319 YRLIGELNCLCN 284
           Y ++  LNCLC+
Sbjct: 212 YHILAMLNCLCS 223


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 319 YRLIGELNCLCN 284
           Y ++  LNCLC+
Sbjct: 212 YHILAMLNCLCS 223


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 348 RQQTSPLPTNGHYGRPHVVKRQ 413
           R + SPL  NG+   PH+   Q
Sbjct: 94  RLEKSPLLANGYNHSPHLSHMQ 115


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,232
Number of Sequences: 336
Number of extensions: 3664
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)