Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0391
(705 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 36 0.028
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 36 0.028
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 36 0.028
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 36 0.028
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical p... 36 0.028
Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical pr... 36 0.028
AL117202-1|CAB55091.2| 454|Caenorhabditis elegans Hypothetical ... 33 0.26
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 33 0.26
U41028-1|AAA82354.1| 532|Caenorhabditis elegans Hypothetical pr... 31 1.1
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 30 1.4
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 30 1.4
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 29 3.2
U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein. 29 4.3
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein... 29 4.3
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein... 29 4.3
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 28 5.7
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 28 5.7
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 28 5.7
L14433-8|AAA27971.3| 1249|Caenorhabditis elegans Uncoordinated p... 28 7.5
AF022975-3|AAB70674.1| 548|Caenorhabditis elegans Hypothetical ... 28 7.5
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 27 9.9
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 276 QKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 377
Q+V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 136 QRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 276 QKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 377
Q+V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 136 QRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 276 QKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 377
Q+V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 65 QRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 98
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 276 QKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 377
Q+V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 136 QRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 276 QKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 377
Q+V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 136 QRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 276 QKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 377
Q+V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 136 QRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 276 QKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 377
Q+V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 136 QRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 276 QKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 377
Q+V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 65 QRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 98
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 276 QKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 377
Q+V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 136 QRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 276 QKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 377
Q+V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 136 QRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 282 VLHKQFNSPINLYSEQNIANSIRQQTSPLP 371
V H Q+NSP+NLYS + A + QQT +P
Sbjct: 341 VHHLQYNSPMNLYSSEATAEQLYQQTGAVP 370
>Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 282 VLHKQFNSPINLYSEQNIANSIRQQTSPLP 371
V H Q+NSP+NLYS + A + QQT +P
Sbjct: 341 VHHLQYNSPMNLYSSEATAEQLYQQTGAVP 370
>AL117202-1|CAB55091.2| 454|Caenorhabditis elegans Hypothetical
protein Y47D3A.1 protein.
Length = 454
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -2
Query: 353 LPDRVCNVLFRV*IDWRVELLVQHLLFHKGITVVVVRRCPHCWVGV 216
L R+ N F I + + Q ++FHK ++RRCP+C V +
Sbjct: 46 LKSRLVNKAFNFGIIHSIRIEHQTVIFHKPTRCDIIRRCPNCTVNL 91
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 32.7 bits (71), Expect = 0.26
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Frame = +3
Query: 57 MSLNPNFFPNGYQDPKHPEEEVVSNWPYRTTPLVLPGAKVRREPGPTESYLRHHPNPAM- 233
M+ +PNFF QD E+V+S T LVL +K+ + E+ ++
Sbjct: 1 MARDPNFFVYSIQDA----EKVISRSTNSETTLVLLNSKL--DSSRIENLIQPDSTKLQF 54
Query: 234 -RAPPNHDYRDTLMKQKVLHKQFNSPINLYSEQN 332
R P++DY DT ++ F +PI +S N
Sbjct: 55 YRGIPDYDYNDTQSERAAQSLIFANPIKSWSSGN 88
>U41028-1|AAA82354.1| 532|Caenorhabditis elegans Hypothetical
protein C25G6.3 protein.
Length = 532
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +3
Query: 174 VRREPGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVLHKQFN 302
++ P PT+ NP +AP N ++R+ L+ H+ +N
Sbjct: 57 LKPSPTPTQENTETPENPPEKAPENANFREWLLDNLSYHRNYN 99
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 279 KVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 377
+ +H Q+NSP+ LYS++ +QQ P +
Sbjct: 3 QTVHLQYNSPMGLYSKEAAVEQFQQQIGETPND 35
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 279 KVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 377
+ +H Q+NSP+ LYS++ +QQ P +
Sbjct: 122 QTVHLQYNSPMGLYSKEAAVEQFQQQIGETPND 154
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 29.1 bits (62), Expect = 3.2
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 12/109 (11%)
Frame = +3
Query: 99 PKHPEEE-----VVSNWPYRT---TPLVLPGAKVRREPGPTESYLRHHPNPAMRAPPNHD 254
PK P++E ++ P RT TPL AK + P P + P APP +
Sbjct: 338 PKAPQKENKEGGEMTETPRRTITKTPLKTVNAKAKTSPTPPVERQKKERKPLYVAPPAKE 397
Query: 255 YRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTS----PLPTNGHYG 389
+ ++K+ K SP ++ + +SI +S P PT+ G
Sbjct: 398 RVE--KEKKIPSKPVVSPPTTAEKKPVVSSIPSTSSASKGPFPTSSFAG 444
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 29.1 bits (62), Expect = 3.2
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 12/109 (11%)
Frame = +3
Query: 99 PKHPEEE-----VVSNWPYRT---TPLVLPGAKVRREPGPTESYLRHHPNPAMRAPPNHD 254
PK P++E ++ P RT TPL AK + P P + P APP +
Sbjct: 406 PKAPQKENKEGGEMTETPRRTITKTPLKTVNAKAKTSPTPPVERQKKERKPLYVAPPAKE 465
Query: 255 YRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTS----PLPTNGHYG 389
+ ++K+ K SP ++ + +SI +S P PT+ G
Sbjct: 466 RVE--KEKKIPSKPVVSPPTTAEKKPVVSSIPSTSSASKGPFPTSSFAG 512
>U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical protein
T28D9.7 protein.
Length = 982
Score = 29.1 bits (62), Expect = 3.2
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = +3
Query: 12 NSARGSXTSIPTSVTMSLNP---NFFPNGYQDPKHPEEEVVSNWP-YRTTPLVLPGAKVR 179
N G+ T P+ + L+ N P Y D HPE+ N P Y T +
Sbjct: 851 NDPSGNSTLTPSEIKNFLDQVQRNSQPPSYHDDHHPEDHYYYNDPNYLTISPPSDRPEDN 910
Query: 180 REPGPTESYLRHHPNPAMRAPPNHDYRD 263
RE G T Y + +P RAPP + RD
Sbjct: 911 RE-GSTSGY---YSSP--RAPPQANPRD 932
>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical
protein ZK662.4 protein.
Length = 1440
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 267 LMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRPHVVKRQ 413
L KQ L + N+ S++++ + + P+PT +Y PHV K +
Sbjct: 573 LQKQVHLGLYAHGVDNISSDRDVQSIVGHHYPPMPTVANYDIPHVPKEE 621
>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical
protein ZK662.4 protein.
Length = 1440
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 267 LMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRPHVVKRQ 413
L KQ L + N+ S++++ + + P+PT +Y PHV K +
Sbjct: 573 LQKQVHLGLYAHGVDNISSDRDVQSIVGHHYPPMPTVANYDIPHVPKEE 621
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical
protein F59B10.2 protein.
Length = 482
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 297 FNSPINLYSEQNIANSIRQQTSPLPTNGHYGRPHV--VKRQVF 419
F+S N + + +S+ Q PLP HY RPH +K VF
Sbjct: 6 FSSRRNCFPCAPLYSSLLAQCVPLPLQHHYHRPHYESLKSSVF 48
>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
Length = 1440
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 267 LMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRPHVVKRQ 413
L KQ L + N+ S++++ + + P+PT +Y PHV K +
Sbjct: 573 LQKQVHLGLYAHGVDNISSDRDVQSIVGHHYPPMPTVANYDIPHVPKEE 621
>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 267 LMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRPHVVKRQ 413
L KQ L + N+ S++++ + + P+PT +Y PHV K +
Sbjct: 573 LQKQVHLGLYAHGVDNISSDRDVQSIVGHHYPPMPTVANYDIPHVPKEE 621
>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 267 LMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRPHVVKRQ 413
L KQ L + N+ S++++ + + P+PT +Y PHV K +
Sbjct: 573 LQKQVHLGLYAHGVDNISSDRDVQSIVGHHYPPMPTVANYDIPHVPKEE 621
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +3
Query: 264 TLMKQKVL--HKQFNSPINLYSEQNIANSIRQQT 359
+L+KQ +L H +F+ I+LY++ + ANSI T
Sbjct: 1446 SLLKQSLLRSHARFDPDISLYAQNHTANSIGDVT 1479
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +3
Query: 264 TLMKQKVL--HKQFNSPINLYSEQNIANSIRQQT 359
+L+KQ +L H +F+ I+LY++ + ANSI T
Sbjct: 1446 SLLKQSLLRSHARFDPDISLYAQNHTANSIGDVT 1479
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
protein R10E11.1b protein.
Length = 2056
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 149 SSRAPGS*GPKGAWPHRELPASSPQPSNEG 238
S+ A GS GP G+ PH + P PSN G
Sbjct: 45 STSAGGSGGPSGSTPHPQ-GTPQPAPSNNG 73
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
protein R10E11.1a protein.
Length = 2045
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 149 SSRAPGS*GPKGAWPHRELPASSPQPSNEG 238
S+ A GS GP G+ PH + P PSN G
Sbjct: 45 STSAGGSGGPSGSTPHPQ-GTPQPAPSNNG 73
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +3
Query: 264 TLMKQKVL--HKQFNSPINLYSEQNIANSIRQQT 359
+L+KQ +L H +F+ I+LY++ + ANSI T
Sbjct: 1446 SLLKQSLLRSHARFDPDISLYAQNHTANSIGDVT 1479
>L14433-8|AAA27971.3| 1249|Caenorhabditis elegans Uncoordinated
protein 36 protein.
Length = 1249
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 511 QTIYLFHAKLSVSFYE--HEHVVDLLAEDLEPAPQTR 615
+ IYL A L VS +E ++HVVD +AE PA R
Sbjct: 932 KAIYLDKAVLGVSGFEFAYDHVVDTMAEHGCPASDDR 968
>AF022975-3|AAB70674.1| 548|Caenorhabditis elegans Hypothetical
protein K09C6.8 protein.
Length = 548
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 400 LSRG-KSFTRNATMQQSTHILIDALMLLSIYYAIFRFLQTIYLFHAKLSVSF 552
+S+G K N M ++ + M++ Y A+ ++ QTIY FH + +++F
Sbjct: 60 ISKGTKVMLGNFPMTPKDDVIGNMGMVVCRYLALNQYHQTIYHFHFRAAINF 111
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
Frame = +3
Query: 162 PGAKVRREPGPTESYLRH---HPNPAMRAPPNH 251
PG RR PGP R P P R PP H
Sbjct: 250 PGPPTRRPPGPPGPPTRRPPGPPGPPTRRPPGH 282
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,522,496
Number of Sequences: 27780
Number of extensions: 341332
Number of successful extensions: 1136
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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