Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0390
         (328 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CCFC1 Cluster: hypothetical protein TTHERM_0018...    35   0.40 
UniRef50_Q22YM3 Cluster: Putative uncharacterized protein; n=1; ...    33   1.6  
UniRef50_A7R027 Cluster: Chromosome undetermined scaffold_296, w...    31   3.7  
UniRef50_Q17P66 Cluster: Putative uncharacterized protein; n=1; ...    31   4.9  
UniRef50_A2DLF6 Cluster: Surface antigen BspA-like; n=1; Trichom...    31   4.9  
UniRef50_A5AX44 Cluster: Putative uncharacterized protein; n=2; ...    31   6.5  
UniRef50_Q3SE62 Cluster: DNA-directed RNA polymerase; n=3; Param...    31   6.5  
UniRef50_A2F5M8 Cluster: Putative uncharacterized protein; n=1; ...    31   6.5  
UniRef50_UPI00005A0006 Cluster: PREDICTED: similar to Fc fragmen...    30   8.6  
UniRef50_UPI0000EB4850 Cluster: UPI0000EB4850 related cluster; n...    30   8.6  
UniRef50_Q2T8J2 Cluster: Putative uncharacterized protein; n=1; ...    30   8.6  
UniRef50_Q22650 Cluster: Putative uncharacterized protein; n=2; ...    30   8.6  
UniRef50_Q870B6 Cluster: Beta-glucosidase Cel1C; n=5; Neocallima...    30   8.6  
UniRef50_Q01262 Cluster: Hydantoin utilization protein A; n=2; B...    30   8.6  

>UniRef50_UPI00006CCFC1 Cluster: hypothetical protein
           TTHERM_00188600; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00188600 - Tetrahymena
           thermophila SB210
          Length = 1684

 Score = 34.7 bits (76), Expect = 0.40
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +3

Query: 129 QYTAEKSFKMISENFSVSGSNEDMPSKTQSTITLDRKDAVVENDYNPFEHS 281
           +Y+  KS    S++ + S +N+D   K+  TI  D++D   +N Y    HS
Sbjct: 588 KYSQHKSKTYSSQDLASSQTNKDQSEKSPKTIKEDKRDTKTKNHYEQNRHS 638


>UniRef50_Q22YM3 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1583

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = +3

Query: 141  EKSFKMISENFSVSGSNEDMPSKTQSTITLDRKDAVVENDYNPFEHSDVRTQDINHRS 314
            +K  K   ENFSV   N++     Q+    D+ D  + N+YN   HS+   Q +  ++
Sbjct: 1414 QKQAKYTQENFSVIYLNDNTSKNNQN----DKTDISIINNYNSLNHSETINQQLKQQN 1467


>UniRef50_A7R027 Cluster: Chromosome undetermined scaffold_296,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome undetermined scaffold_296, whole genome
           shotgun sequence - Vitis vinifera (Grape)
          Length = 501

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = +3

Query: 156 MISENFSVSGSNEDMPSKTQSTITLDRKDAVVENDYNPFEHSDVRTQDINHRSFL 320
           M  E FS+  S EDM ++ ++T  L R    +  ++  F+  +  +   NH+S +
Sbjct: 115 MAQEWFSIKKSYEDMKNRIETTTRLGRVSEEIRKEHKGFQEWNHVSTQYNHQSIV 169


>UniRef50_Q17P66 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 1087

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +1

Query: 22  VREQNVFKYVKCVIRSLQIRLKPFNFMSEFLVYCDYNIRLRNHL 153
           +R + + K  K + + L+I L+P N +S  +  CD +  L +HL
Sbjct: 208 IRRKWLLKMKKTISKILEINLEPTNSVSNLIPICDGHYELISHL 251


>UniRef50_A2DLF6 Cluster: Surface antigen BspA-like; n=1;
           Trichomonas vaginalis G3|Rep: Surface antigen BspA-like
           - Trichomonas vaginalis G3
          Length = 788

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -1

Query: 223 IVDWVFDGMSSLLPLTLKFSEIILNDFSAVYCNHNTLE 110
           I   +FDG SSL   TL  +  I+NDFS   C   T +
Sbjct: 183 IAPHLFDGCSSLATFTLPENVTIINDFSFSACGLTTFD 220


>UniRef50_A5AX44 Cluster: Putative uncharacterized protein; n=2;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 877

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +3

Query: 138 AEKSFKMISENFSVSGSNEDMPSKT-QSTITLDRKDAVVENDYNPFEHSDVRTQDINHR 311
           +++    + EN  ++    D+  +T Q+ + L R++ +VE D N F H D    +++HR
Sbjct: 513 SQRDVHELVENDLINWDRNDIAGETIQTDVLLSRQENIVERD-NEFIHDDDIDDEMSHR 570


>UniRef50_Q3SE62 Cluster: DNA-directed RNA polymerase; n=3;
           Paramecium tetraurelia|Rep: DNA-directed RNA polymerase
           - Paramecium tetraurelia
          Length = 1368

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
 Frame = +1

Query: 34  NVFKYVKCVIRSL-QIRLKP--FNFMSEFLVYCDYNIRLRNHLK*FRKILVSAAAMRTCH 204
           +V K +KC+     Q+RL P   N +++ +V+C         LK F+K+L    + + C 
Sbjct: 95  HVVKCLKCLCYKCGQVRLTPDEINQLTQKMVHCIQTRSYNAQLKVFKKVLKKCRSNKQCP 154

Query: 205 QKPSQRSRSTEKMLLWKMTTILLNTVTL 288
               ++    +K+       I+L+T+ +
Sbjct: 155 HCYCEQIGEAKKLAKGDAGKIILDTMDI 182


>UniRef50_A2F5M8 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 82

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = -2

Query: 162 KSF*MISQPYIVITIH*KLTHKIKRFESYLQ*TNNTFYVLKHVLLSNPRAEF 7
           K+      P+I ITI    TH  +R +  L   NN    L +   SNPR  F
Sbjct: 25  KNLGFFDSPHISITIDGGNTHGFERKDDILYQNNNNINKLVYYFPSNPRTSF 76


>UniRef50_UPI00005A0006 Cluster: PREDICTED: similar to Fc fragment of
            IgG binding protein; n=1; Canis lupus familiaris|Rep:
            PREDICTED: similar to Fc fragment of IgG binding protein
            - Canis familiaris
          Length = 1923

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 297  LVF*RHCVQKDCSHFPQQHLFCRA*SLTGFLMAC 196
            L F  +C+   C H+  +H+ CRA  L  F +AC
Sbjct: 1440 LPFMDNCLDDACRHYGARHIICRA--LAAFAVAC 1471


>UniRef50_UPI0000EB4850 Cluster: UPI0000EB4850 related cluster; n=1;
            Canis lupus familiaris|Rep: UPI0000EB4850 UniRef100 entry
            - Canis familiaris
          Length = 2451

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 297  LVF*RHCVQKDCSHFPQQHLFCRA*SLTGFLMAC 196
            L F  +C+   C H+  +H+ CRA  L  F +AC
Sbjct: 1740 LPFMDNCLDDACRHYGARHIICRA--LAAFAVAC 1771


>UniRef50_Q2T8J2 Cluster: Putative uncharacterized protein; n=1;
           Burkholderia thailandensis E264|Rep: Putative
           uncharacterized protein - Burkholderia thailandensis
           (strain E264 / ATCC 700388 / DSM 13276 /CIP 106301)
          Length = 276

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +1

Query: 1   LQEFGTRVREQNVFKYVKCVIRSLQIRLKPFNFMS--EFLVYCDYNIRLRNHL 153
           L+ F   +RE   F +   V+R      +PF+F S  EFLV+C  ++R + HL
Sbjct: 42  LRPFPKLIRE---FGFGVVVVRQSIRYERPFSFFSADEFLVHCTISVRQKRHL 91


>UniRef50_Q22650 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 279

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 16/62 (25%), Positives = 30/62 (48%)
 Frame = +3

Query: 138 AEKSFKMISENFSVSGSNEDMPSKTQSTITLDRKDAVVENDYNPFEHSDVRTQDINHRSF 317
           A +S   I+E  + SGS E+      +   + +++ + E + +PF+ S   T   +  SF
Sbjct: 200 AIRSLFPINETDANSGSEENSEDPVTTVKPISKEEGIDEENNDPFDASSTTTSSSSPDSF 259

Query: 318 LP 323
            P
Sbjct: 260 FP 261


>UniRef50_Q870B6 Cluster: Beta-glucosidase Cel1C; n=5;
           Neocallimastigaceae|Rep: Beta-glucosidase Cel1C -
           Piromyces sp. E2
          Length = 665

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +3

Query: 189 NEDMPSKTQSTITLDRKDAVVENDYNPFEHSDVRTQDINHRSFLP 323
           NED PS  ++ + +D    V + D +  E+SD+   +   +  LP
Sbjct: 37  NEDTPSDDETPVNVDDNTPVEKEDDSAIENSDIEDSENKSKGKLP 81


>UniRef50_Q01262 Cluster: Hydantoin utilization protein A; n=2;
           Bacteria|Rep: Hydantoin utilization protein A -
           Pseudomonas sp. (strain NS671)
          Length = 690

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +3

Query: 126 LQYTAEKSFKMISENFSVSGSNEDMPSKTQSTITLDRKDAVVENDYNPFEHSDVR 290
           L+Y   K+  M+S N   SG NED+       I   ++D V + D      +D R
Sbjct: 491 LKYDVIKTEFMMSTNMDFSGLNEDLAGLETQLINQLKEDGVSKQDIRILRSADCR 545


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 297,437,874
Number of Sequences: 1657284
Number of extensions: 4706904
Number of successful extensions: 12812
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 12571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12809
length of database: 575,637,011
effective HSP length: 85
effective length of database: 434,767,871
effective search space used: 9999661033
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)