Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0390
         (328 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   5.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   5.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   5.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   5.7  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    20   5.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = +1

Query: 208  KPSQRSRSTEKMLLWKMTTILLNTVTLEHKTST 306
            KPS    ST     W  TT    T T    TST
Sbjct: 1038 KPSTWWSSTTTSPWWTTTTTRRTTTTRPTTTST 1070


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 222 ITLDRKDAVVENDY 263
           I++DRK  + EN Y
Sbjct: 717 ISVDRKAVIAENTY 730


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 222 ITLDRKDAVVENDY 263
           I++DRK  + EN Y
Sbjct: 717 ISVDRKAVIAENTY 730


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 222 ITLDRKDAVVENDY 263
           I++DRK  + EN Y
Sbjct: 717 ISVDRKAVIAENTY 730


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 222 ITLDRKDAVVENDY 263
           I++DRK  + EN Y
Sbjct: 717 ISVDRKAVIAENTY 730


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 271 LNTVTLEHKTSTIGAFFHL 327
           L T+ L     T G FFH+
Sbjct: 280 LKTLVLNFPKFTAGGFFHV 298


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,121
Number of Sequences: 336
Number of extensions: 1298
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6261139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)