Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0390
         (328 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    23   3.9  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    22   5.1  

>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -1

Query: 214 WVFDGMSSLLPLTLKFSEII 155
           W F+  + +LP+TL  +++I
Sbjct: 271 WSFETSTDMLPITLVLTQLI 290


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 14/58 (24%), Positives = 26/58 (44%)
 Frame = +1

Query: 43  KYVKCVIRSLQIRLKPFNFMSEFLVYCDYNIRLRNHLK*FRKILVSAAAMRTCHQKPS 216
           K +K   R   +  K    + +FL+  D N      +  +  IL+  + ++  HQKP+
Sbjct: 396 KLIKGFKREYPVLEKLVLVLKQFLLQRDLNEVFTGGISSYSLILMCISFLQQHHQKPN 453


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 330,688
Number of Sequences: 2352
Number of extensions: 5360
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22477884
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)