Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0390
         (328 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF128536-1|AAD41781.1|  486|Homo sapiens cytoplasmic phosphoprot...    29   4.4  
AK093081-1|BAC04046.1|  534|Homo sapiens protein ( Homo sapiens ...    28   5.8  
BC126450-1|AAI26451.1|  297|Homo sapiens coiled-coil domain cont...    28   7.7  
BC126448-1|AAI26449.1|  297|Homo sapiens coiled-coil domain cont...    28   7.7  
AY685273-1|AAT96424.1|  102|Homo sapiens immunoglobulin variable...    28   7.7  
AK027247-1|BAB15706.1|  297|Homo sapiens protein ( Homo sapiens ...    28   7.7  

>AF128536-1|AAD41781.1|  486|Homo sapiens cytoplasmic phosphoprotein
           PACSIN2 protein.
          Length = 486

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
 Frame = +3

Query: 153 KMISENFSVSGSNED----MPSKTQSTITLDR---KDAVVENDYNPFEHSD 284
           K  ++ F+++G N+     +PSK  ST+ +     + A  ++ YNPFE  D
Sbjct: 318 KKATDGFTLTGINQTGDQFLPSKPSSTLNVPSNPAQSAQSQSSYNPFEDED 368


>AK093081-1|BAC04046.1|  534|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35762 fis, clone TESTI2004793, moderately
           similar to Homo sapiens NY-REN-2 antigen mRNA. ).
          Length = 534

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +1

Query: 208 KPSQRSRSTEKMLLWKMTTILLNTVTLEHKTSTIGAFFH 324
           KP   SR T+++ L K+  +L    T +H TS    F H
Sbjct: 476 KPVTNSRDTQEVPLEKVKQVLKIIATFKHTTSIFDDFAH 514


>BC126450-1|AAI26451.1|  297|Homo sapiens coiled-coil domain
           containing 102B protein.
          Length = 297

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 139 LRNHLK*FRKILVSAAAMRTCHQKPSQRSRSTEKMLLWK 255
           L+ HL  F+KIL     MRT  +K  +R  S   +  WK
Sbjct: 44  LQVHLDEFQKILWKEREMRTALEKEIERLESALSLWKWK 82


>BC126448-1|AAI26449.1|  297|Homo sapiens coiled-coil domain
           containing 102B protein.
          Length = 297

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 139 LRNHLK*FRKILVSAAAMRTCHQKPSQRSRSTEKMLLWK 255
           L+ HL  F+KIL     MRT  +K  +R  S   +  WK
Sbjct: 44  LQVHLDEFQKILWKEREMRTALEKEIERLESALSLWKWK 82


>AY685273-1|AAT96424.1|  102|Homo sapiens immunoglobulin variable
           region VL kappa domain protein.
          Length = 102

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -1

Query: 208 FDGMSSLLPLTLKFSEIILNDFSAVYCNHNT 116
           F G  S    TL  S +   DF+  YC H T
Sbjct: 62  FSGSGSGTEFTLTISSLQSEDFAVYYCQHET 92


>AK027247-1|BAB15706.1|  297|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23594 fis, clone LNG14867. ).
          Length = 297

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 139 LRNHLK*FRKILVSAAAMRTCHQKPSQRSRSTEKMLLWK 255
           L+ HL  F+KIL     MRT  +K  +R  S   +  WK
Sbjct: 44  LQVHLDEFQKILWKEREMRTALEKEIERLESALSLWKWK 82


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,993,788
Number of Sequences: 237096
Number of extensions: 689249
Number of successful extensions: 6616
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6616
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1685725862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)