Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0389
(537 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 204 1e-51
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 191 8e-48
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 171 9e-42
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 167 1e-40
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 167 1e-40
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 166 3e-40
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 166 3e-40
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 163 2e-39
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 162 5e-39
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 160 2e-38
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 149 4e-35
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 144 1e-33
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 144 1e-33
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 144 1e-33
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 143 2e-33
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 138 6e-32
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 138 6e-32
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 138 6e-32
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 135 5e-31
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 132 6e-30
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 131 1e-29
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 130 3e-29
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 125 6e-28
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 123 2e-27
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 123 2e-27
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 123 2e-27
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 123 2e-27
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 118 6e-26
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 117 1e-25
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 111 7e-24
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 111 7e-24
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 100 2e-20
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 98 1e-19
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 95 9e-19
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 91 1e-17
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 90 3e-17
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 88 1e-16
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 86 6e-16
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 81 2e-14
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 80 3e-14
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 77 2e-13
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 76 6e-13
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 75 8e-13
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 71 1e-11
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 68 1e-10
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 68 2e-10
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 66 6e-10
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 65 8e-10
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 65 1e-09
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 65 1e-09
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 65 1e-09
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 64 1e-09
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 61 2e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 6e-08
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 59 7e-08
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 58 1e-07
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 58 1e-07
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 58 1e-07
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 58 1e-07
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 57 3e-07
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 56 4e-07
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 56 4e-07
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 54 2e-06
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 53 4e-06
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 53 4e-06
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 52 6e-06
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 52 6e-06
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 52 1e-05
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 51 1e-05
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 51 2e-05
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 50 3e-05
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 49 6e-05
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 49 8e-05
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 47 2e-04
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 47 3e-04
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 47 3e-04
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 46 4e-04
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 45 0.001
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 45 0.001
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 44 0.002
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 44 0.002
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 43 0.004
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 42 0.012
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 40 0.027
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 40 0.027
UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=... 40 0.027
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 40 0.048
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 39 0.063
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 39 0.084
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 37 0.26
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 37 0.34
UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia polym... 36 0.78
UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|R... 36 0.78
UniRef50_P03877 Cluster: Intron-encoded DNA endonuclease aI3 pre... 36 0.78
UniRef50_A5H2T8 Cluster: Cytochrome c oxidase subunit 1; n=1; Pi... 34 1.8
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 34 1.8
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 33 3.1
UniRef50_P03875 Cluster: Putative COX1/OXI3 intron 1 protein; n=... 33 3.1
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 33 4.2
UniRef50_Q8ID15 Cluster: Putative uncharacterized protein MAL13P... 32 7.3
UniRef50_Q0BZ17 Cluster: Amidohydrolase family/endoribonuclease ... 32 9.6
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 204 bits (497), Expect = 1e-51
Identities = 111/178 (62%), Positives = 119/178 (66%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN* 183
FGI +G++GTSL LLIRAELG PGSLIGDDQIYNTIVTAHA N
Sbjct: 19 FGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNW 78
Query: 184 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 363
LVPL+LGAPD+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH G
Sbjct: 79 LVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGS 138
Query: 364 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
SVDLAIFSLHLAGISS SFDQ+PLFV AVGITAFLLLLSL
Sbjct: 139 SVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFLLLLSL 196
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 191 bits (466), Expect = 8e-48
Identities = 103/172 (59%), Positives = 112/172 (65%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
++GTSL LLIR ELG PGSLIGDDQIYNTIVTAHA N L+PL+L
Sbjct: 1 MVGTSLSLLIRTELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLML 60
Query: 202 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 381
GAPD+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAI
Sbjct: 61 GAPDMAFPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAI 120
Query: 382 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
FSLHLAGISS SFDQ+PLF+ AVGITA LLLLSL
Sbjct: 121 FSLHLAGISSILGAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSL 172
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 171 bits (416), Expect = 9e-42
Identities = 97/178 (54%), Positives = 110/178 (61%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN* 183
FG +G+IGT+L LLIRAELG PG+L+GDDQIYN IVTAHA N
Sbjct: 23 FGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNW 82
Query: 184 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 363
LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G
Sbjct: 83 LVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGA 142
Query: 364 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
SVDLAIFSLHLAGISS S Q PLFV +V ITA LLLLSL
Sbjct: 143 SVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSVLITAVLLLLSL 200
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 167 bits (407), Expect = 1e-40
Identities = 95/178 (53%), Positives = 111/178 (62%)
Frame = -2
Query: 536 SDNNNKNAVIPTAHTNKGN*SNDILFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLP 357
S++N+K AV T TN G S I +R I+E PAKC+EKI STD P
Sbjct: 36 SESNSKMAVSNTDQTNSGMRSMVIPADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAP 95
Query: 356 LCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLILFIRGNAISGAPSIRGTNQF 177
CAI SGG TVHPVP P STI L + ++EGG +QNL+LFIRGNA+SGAP++ GTNQF
Sbjct: 96 ACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQF 155
Query: 176 PNPPXXXXXXXXXXXXKACAVTIVL*I*SSPINDPGFPNSARIKSLKDVPIIPDQIPK 3
PNPP KA AVT+ L I S PI PG PNSARIKSL DVP +P PK
Sbjct: 156 PNPPIMIGMTMKKIITKAWAVTMTL-IWSFPIKLPGCPNSARIKSLSDVPTMPAHAPK 212
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 167 bits (406), Expect = 1e-40
Identities = 92/177 (51%), Positives = 106/177 (59%)
Frame = +1
Query: 7 GI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*L 186
GI SG+IGT+L LLIR ELG PGS IG+DQ+YN +VTAHA N L
Sbjct: 6 GIWSGLIGTALSLLIRVELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWL 65
Query: 187 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRS 366
VPL+LGAPD+AFPR+NN+ F VE+GAGTG TVYPPLS N AH G S
Sbjct: 66 VPLMLGAPDMAFPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPS 125
Query: 367 VDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
VDLAIFSLHLAG+SS + + LFV +V ITA LLLLSL
Sbjct: 126 VDLAIFSLHLAGVSSILGAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSL 182
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 166 bits (403), Expect = 3e-40
Identities = 92/178 (51%), Positives = 107/178 (60%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN* 183
FG +G++GT+L LLIRAEL PG+L+GDDQIYN IVTAHA N
Sbjct: 11 FGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNW 70
Query: 184 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 363
L+PL++GAPD+AFPR+NN+ F +E GAGTG TVYPPL+ N+AH G
Sbjct: 71 LIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGA 130
Query: 364 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
SVDL IFSLHLAGISS S Q PLFV AV ITA LLLLSL
Sbjct: 131 SVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLITAVLLLLSL 188
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 166 bits (403), Expect = 3e-40
Identities = 92/178 (51%), Positives = 107/178 (60%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN* 183
FG +G++GT+L LLIRAEL PG+L+GDDQIYN IVTAHA N
Sbjct: 22 FGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNW 81
Query: 184 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 363
LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G
Sbjct: 82 LVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGA 141
Query: 364 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
SVDL IFSLHLAG+SS S Q PLFV AV +TA LLLLSL
Sbjct: 142 SVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVLLLLSL 199
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 163 bits (397), Expect = 2e-39
Identities = 90/178 (50%), Positives = 107/178 (60%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN* 183
FG +G++GT+L LLIRAEL PG+L+GDDQIYN IVTAHA N
Sbjct: 22 FGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNW 81
Query: 184 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 363
LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G
Sbjct: 82 LVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGA 141
Query: 364 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
SVDL IFSLHLAG+SS + Q PLFV +V +TA LLLLSL
Sbjct: 142 SVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLVTAVLLLLSL 199
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 162 bits (393), Expect = 5e-39
Identities = 89/178 (50%), Positives = 107/178 (60%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN* 183
FG +G++GT+L LLIRAELG PG+L+G+D IYN IVTAHA N
Sbjct: 22 FGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNW 81
Query: 184 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 363
LVPL++GAPD+AFPR+NN+ F +VE GAGTG TVYPPL+ N +H G
Sbjct: 82 LVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGA 141
Query: 364 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
SVDL IFSLHLAG+SS + Q PLFV +V ITA LLLLSL
Sbjct: 142 SVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSL 199
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 160 bits (388), Expect = 2e-38
Identities = 87/178 (48%), Positives = 105/178 (58%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN* 183
FG SG IGT+ +LIR EL +PGS++GDD +YN IVTAHA N
Sbjct: 23 FGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNW 82
Query: 184 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 363
VPL++GAPD+AFPR+NNI F +VE GAGTG TVYPPL+S AH G
Sbjct: 83 FVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGG 142
Query: 364 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
SVD+AIFSLHLAG+SS + ++PLFV +V ITA LLLLSL
Sbjct: 143 SVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAILLLLSL 200
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 149 bits (361), Expect = 4e-35
Identities = 82/178 (46%), Positives = 103/178 (57%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN* 183
FG+ SG++G S+ L+IR ELG PGSLIG+DQIYN+IVT+HA N
Sbjct: 6 FGMWSGMLGFSMSLIIRLELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNW 65
Query: 184 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 363
L+PL+LG+PD++FPR+NN+ F + G GTG TVYPPLS + H G
Sbjct: 66 LIPLMLGSPDMSFPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGM 125
Query: 364 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
SVDL IFSLHLAG SS + D++ LF +V ITA LLLLSL
Sbjct: 126 SVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSL 183
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 144 bits (349), Expect = 1e-33
Identities = 83/180 (46%), Positives = 101/180 (56%), Gaps = 2/180 (1%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXX 177
F + + +IGT+ +LIR EL PG L GD Q+YN I+TAHA
Sbjct: 20 FAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFG 79
Query: 178 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 357
N LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHS 139
Query: 358 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
G SVDLAIFSLHL+GISS + +LPLFV A+ +TA LLLLSL
Sbjct: 140 GGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSL 199
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 144 bits (349), Expect = 1e-33
Identities = 83/180 (46%), Positives = 101/180 (56%), Gaps = 2/180 (1%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXX 177
F + + +IGT+ +LIR EL PG L GD Q+YN I+TAHA
Sbjct: 20 FAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFG 79
Query: 178 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 357
N LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHS 139
Query: 358 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
G SVDLAIFSLHL+GISS + +LPLFV A+ +TA LLLLSL
Sbjct: 140 GGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSL 199
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 144 bits (349), Expect = 1e-33
Identities = 83/180 (46%), Positives = 101/180 (56%), Gaps = 2/180 (1%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXX 177
F + + +IGT+ +LIR EL PG L GD Q+YN I+TAHA
Sbjct: 20 FAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFG 79
Query: 178 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 357
N LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHS 139
Query: 358 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
G SVDLAIFSLHL+GISS + +LPLFV A+ +TA LLLLSL
Sbjct: 140 GGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSL 199
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 143 bits (347), Expect = 2e-33
Identities = 79/180 (43%), Positives = 102/180 (56%), Gaps = 2/180 (1%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXX 177
FG +G++GT +LIR EL PG I G+ Q+YN ++TAHA
Sbjct: 23 FGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFG 82
Query: 178 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 357
N VP+++GAPD+AFPR+NNI F +VE G+GTG TVYPPLS +H
Sbjct: 83 NWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHS 142
Query: 358 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
G +VDLAIFSLHL+G+SS + +LPLFV +V +TAFLLLLSL
Sbjct: 143 GGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSL 202
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 138 bits (335), Expect = 6e-32
Identities = 81/176 (46%), Positives = 99/176 (56%), Gaps = 2/176 (1%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
SG+ GT++ L+IR EL PGS L G+ Q++N +V HA N L+
Sbjct: 25 SGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLL 84
Query: 190 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 369
PL++GA D AFPRINNI F +VE+GAGTG TVYPPLSS AH G SV
Sbjct: 85 PLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSV 144
Query: 370 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
DLAIF+LHL ISS + +LPLFV ++ ITAFLLLLSL
Sbjct: 145 DLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSL 200
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 138 bits (335), Expect = 6e-32
Identities = 81/176 (46%), Positives = 99/176 (56%), Gaps = 2/176 (1%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
SG+ GT++ L+IR EL PGS L G+ Q++N +V HA N L+
Sbjct: 25 SGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLL 84
Query: 190 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 369
PL++GA D AFPRINNI F +VE+GAGTG TVYPPLSS AH G SV
Sbjct: 85 PLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSV 144
Query: 370 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
DLAIF+LHL ISS + +LPLFV ++ ITAFLLLLSL
Sbjct: 145 DLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSL 200
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 138 bits (335), Expect = 6e-32
Identities = 76/180 (42%), Positives = 103/180 (57%), Gaps = 2/180 (1%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXX 177
FG SG++G + +LIR EL P + L+G+ QIYN ++TAHA
Sbjct: 28 FGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPVMIGGFG 87
Query: 178 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 357
N LVP+++G+PD+AFPR+NNI F +VE G GTG TVYPPLSS +H
Sbjct: 88 NWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHS 147
Query: 358 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
G +VDLAIFSLH++G SS S ++PLFV ++ +TAFLLLL++
Sbjct: 148 GGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAFLLLLAV 207
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 135 bits (327), Expect = 5e-31
Identities = 78/176 (44%), Positives = 100/176 (56%), Gaps = 2/176 (1%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
SG+ G+++ ++IR EL PGS L G+ Q++N +V HA N ++
Sbjct: 25 SGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYML 84
Query: 190 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 369
PL++GA D++FPRIN+I F +VE+GAGTG TVYPPLSS AH G SV
Sbjct: 85 PLMIGATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSV 144
Query: 370 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
DLAIFSLHL ISS S ++PLFV A+ ITAFLLLLSL
Sbjct: 145 DLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLLLSL 200
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 132 bits (318), Expect = 6e-30
Identities = 77/179 (43%), Positives = 96/179 (53%), Gaps = 1/179 (0%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN 180
+ + +G+IGT+ +LIR EL PG I D+Q+YN+I+TAHA N
Sbjct: 22 YALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGN 81
Query: 181 *LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 360
L+PL LG PD+ FPR+NNI + +ENG GTG T+YPPLS +H G
Sbjct: 82 FLLPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSG 141
Query: 361 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
SVDLAIF LHL+GISS +L LF AV ITA LLLLSL
Sbjct: 142 PSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITAVLLLLSL 200
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 131 bits (316), Expect = 1e-29
Identities = 76/176 (43%), Positives = 98/176 (55%), Gaps = 2/176 (1%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
SG+ GT++ L+IR EL PG L G++Q++N +V HA N ++
Sbjct: 25 SGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYML 84
Query: 190 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 369
PL++GA D AFPRINNI F +VE+GAGTG TVYPPL+S AH G SV
Sbjct: 85 PLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSV 144
Query: 370 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
DLAIF+LH+ ISS + +LPLFV A+ ITA LLLL+L
Sbjct: 145 DLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVLLLLTL 200
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 130 bits (313), Expect = 3e-29
Identities = 72/179 (40%), Positives = 95/179 (53%), Gaps = 1/179 (0%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN 180
F + SG++GT+ +LIR EL PG I D+Q+YN+I+T+H N
Sbjct: 48 FALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGN 107
Query: 181 *LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 360
L+P+++G PD+AFPR+NN+ + I+ENG GTG T+YPPLS +H
Sbjct: 108 FLLPILIGGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSS 167
Query: 361 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
VDL IF LHL+GISS +L LF AV ITA LLLLSL
Sbjct: 168 MGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLLLLSL 226
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 125 bits (302), Expect = 6e-28
Identities = 76/180 (42%), Positives = 95/180 (52%), Gaps = 2/180 (1%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXX 177
F + S +IGT L +IR EL N GS L G+ Q +N ++TAHA
Sbjct: 26 FALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFG 85
Query: 178 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 357
N L+PL+LGA D+AF R+NNI F +VE GAGTG TVY PL+ +H
Sbjct: 86 NYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHS 145
Query: 358 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
G +VDLAIFSLHL+G SS ++ +PLF AV TA LLLLSL
Sbjct: 146 GPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLLLSL 205
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 123 bits (297), Expect = 2e-27
Identities = 68/180 (37%), Positives = 100/180 (55%), Gaps = 2/180 (1%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXX 177
F + SG++G SL +L+R EL NP L+ + Q++N ++TAHA
Sbjct: 38 FSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALA 97
Query: 178 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 357
N LVPL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157
Query: 358 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
G S+D+AIF+LHL+G+SS + +LPLFV +V ITA L++L+L
Sbjct: 158 GSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILAL 217
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 123 bits (297), Expect = 2e-27
Identities = 68/180 (37%), Positives = 100/180 (55%), Gaps = 2/180 (1%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXX 177
F + SG++G SL +L+R EL NP L+ + Q++N ++TAHA
Sbjct: 38 FSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALA 97
Query: 178 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 357
N LVPL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157
Query: 358 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
G S+D+AIF+LHL+G+SS + +LPLFV +V ITA L++L+L
Sbjct: 158 GSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILAL 217
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 123 bits (297), Expect = 2e-27
Identities = 68/180 (37%), Positives = 100/180 (55%), Gaps = 2/180 (1%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXX 177
F + SG++G SL +L+R EL NP L+ + Q++N ++TAHA
Sbjct: 38 FSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALA 97
Query: 178 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 357
N LVPL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157
Query: 358 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
G S+D+AIF+LHL+G+SS + +LPLFV +V ITA L++L+L
Sbjct: 158 GSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILAL 217
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 123 bits (297), Expect = 2e-27
Identities = 68/180 (37%), Positives = 100/180 (55%), Gaps = 2/180 (1%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXX 177
F + SG++G SL +L+R EL NP L+ + Q++N ++TAHA
Sbjct: 38 FSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALA 97
Query: 178 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 357
N LVPL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157
Query: 358 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
G S+D+AIF+LHL+G+SS + +LPLFV +V ITA L++L+L
Sbjct: 158 GSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILAL 217
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 118 bits (285), Expect = 6e-26
Identities = 63/141 (44%), Positives = 84/141 (59%), Gaps = 5/141 (3%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN 180
F + SG++GT+ +LIR EL PG I ++Q+YN+I+TAHA N
Sbjct: 50 FALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPALIGGFGN 109
Query: 181 *LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNI 348
L+PL++G PD+AFPR+NNI F I+E G GTG T+ YPPLS
Sbjct: 110 FLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQ 169
Query: 349 AHRGRSVDLAIFSLHLAGISS 411
+H G SVDLAIF+LHL+G+SS
Sbjct: 170 SHSGPSVDLAIFALHLSGVSS 190
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 117 bits (282), Expect = 1e-25
Identities = 66/181 (36%), Positives = 88/181 (48%), Gaps = 2/181 (1%)
Frame = +1
Query: 1 YFGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXX 174
+FG+ +G + L +L+R EL PG L G+ YN I T H
Sbjct: 23 FFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGF 82
Query: 175 XN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 354
N VP+++GAPD++FPR+NN F E G GTG TVYPPLSS +H
Sbjct: 83 GNYFVPILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSH 142
Query: 355 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 534
G SVDL IFS HL GI S LPLFV +V +T+FL++++
Sbjct: 143 SGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFLVIVA 202
Query: 535 L 537
+
Sbjct: 203 I 203
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 111 bits (268), Expect = 7e-24
Identities = 60/112 (53%), Positives = 71/112 (63%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN* 183
FG +G+IGT+L LLIRAELG PG+L+GDDQ N IVTAHA N
Sbjct: 23 FGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNW 82
Query: 184 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 339
LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 83 LVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 111 bits (268), Expect = 7e-24
Identities = 63/136 (46%), Positives = 76/136 (55%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN* 183
FGI SG++GTSL L+IR ELG PGSL+ DDQ+YN +VTAH N
Sbjct: 6 FGIWSGLLGTSLSLMIRTELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNW 65
Query: 184 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 363
LVPL+LGAPD+AFPR+NN+ F + G + PL G
Sbjct: 66 LVPLMLGAPDMAFPRMNNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGP 123
Query: 364 SVDLAIFSLHLAGISS 411
SVDLAIF LHLAG+SS
Sbjct: 124 SVDLAIFPLHLAGVSS 139
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 100 bits (240), Expect = 2e-20
Identities = 74/198 (37%), Positives = 97/198 (48%), Gaps = 20/198 (10%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPG-------SLIGD------DQIY---NTIVTAHAXXX 135
F I +GIIG ++ L+RAEL PG + D DQ Y N ++TAH
Sbjct: 46 FAIIAGIIGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYHLWNVLITAHGLIM 105
Query: 136 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVE----NG 303
N VP+++GAPD+AFPR+NNI F V NG
Sbjct: 106 VFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALLLGSTFVPGGTGNG 165
Query: 304 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 483
AGTG TVY PLS++ G +VD+AI SLH+AG SS + ++
Sbjct: 166 AGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLHKM 224
Query: 484 PLFV*AVGITAFLLLLSL 537
PLFV +V +TAFLLLL+L
Sbjct: 225 PLFVWSVLVTAFLLLLAL 242
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 98.3 bits (234), Expect = 1e-19
Identities = 59/115 (51%), Positives = 66/115 (57%)
Frame = +1
Query: 193 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 372
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 373 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
LAIFSLH+AG+ S + ++PLFV AV ITA LLLLSL
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSL 118
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 95.1 bits (226), Expect = 9e-19
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Frame = +1
Query: 52 RAELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 225
+A LG L G D ++N ++T H N +PL++GAPD+AFP
Sbjct: 142 QALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFP 201
Query: 226 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 405
R+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 202 RLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGA 261
Query: 406 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
SS + ++PLF +V +TA+LLLLSL
Sbjct: 262 SSILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSL 305
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 91.1 bits (216), Expect = 1e-17
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 2/179 (1%)
Frame = +1
Query: 7 GI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN 180
G +G+ G+ L +LIR EL +PG G Q+YN+++T H N
Sbjct: 32 GYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGN 91
Query: 181 *LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 360
++PL+LGAP++AFPR+N + F + G G+ T YPPLS
Sbjct: 92 WMLPLMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPE 150
Query: 361 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
S+D I LH GI S + DQ+ +FV +T+FLL+LS+
Sbjct: 151 LSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSV 209
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 90.2 bits (214), Expect = 3e-17
Identities = 56/176 (31%), Positives = 76/176 (43%), Gaps = 2/176 (1%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
SG +G L IR EL G L GD Q YN ++T+H N +
Sbjct: 27 SGFVGYVYSLFIRLELSLIGCGILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFI 86
Query: 190 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 369
P++ G PD+ FPR+NN+ F + E G G G T+YP L H +
Sbjct: 87 PVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLAC 146
Query: 370 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
D +F++HL GISS SF LF+ A ITA LL+++L
Sbjct: 147 DFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLIITL 202
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 88.2 bits (209), Expect = 1e-16
Identities = 46/137 (33%), Positives = 70/137 (51%)
Frame = +1
Query: 1 YFGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN 180
Y G+ SG+ G SL +R EL +PG + +Y++I+T HA N
Sbjct: 23 YMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGN 82
Query: 181 *LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 360
+PL++ D++ PR+NN+ + G G G T+YPPLS++ G
Sbjct: 83 WFIPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDG 142
Query: 361 RSVDLAIFSLHLAGISS 411
+DLA+FSLH+AG+SS
Sbjct: 143 LPIDLAVFSLHMAGMSS 159
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 85.8 bits (203), Expect = 6e-16
Identities = 50/117 (42%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXX 177
F + + +IGT+ +LIR EL PG L GD Q+YN I+TAHA
Sbjct: 20 FAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFG 79
Query: 178 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 348
N LVP+++GAPD+AFPR+NNI F VE GAGTG TV LS I
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 80.6 bits (190), Expect = 2e-14
Identities = 42/109 (38%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXX 177
FG +G++GT +LIR EL PG+ I G+ Q+YN ++TAHA
Sbjct: 24 FGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFG 83
Query: 178 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 324
N VP+++G+PD+AFPR+NNI F +VE G G+G TV
Sbjct: 84 NWFVPILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 80.2 bits (189), Expect = 3e-14
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +1
Query: 193 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 372
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 373 LAIFS 387
LAI+S
Sbjct: 61 LAIYS 65
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 77.4 bits (182), Expect = 2e-13
Identities = 47/117 (40%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXX 177
F + S +IGT L +IR EL N GS L G+ Q +N ++TAHA
Sbjct: 26 FALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFG 85
Query: 178 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 348
N L+PL+LGA D+AF R+NNI F +VE GAGTG TV SS +
Sbjct: 86 NYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVKKICSSKM 142
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 75.8 bits (178), Expect = 6e-13
Identities = 54/176 (30%), Positives = 81/176 (46%), Gaps = 3/176 (1%)
Frame = +1
Query: 19 GIIGTSLRLLIRAELGNPG-SLIGDD--QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
G+IG + +LIR EL G +I D +IYN + T H N L
Sbjct: 32 GMIGFYMSVLIRTELSMSGLKIITMDTLEIYNLLFTLHGLIMVFFNIMTGLFGGIGNYLY 91
Query: 190 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 369
P++LG D+ +PR+N +E G+GTG T+YPPLS+++++ G +
Sbjct: 92 PVLLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--I 149
Query: 370 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
D IF L AGI+S D++ ++ +T+FLLLLSL
Sbjct: 150 DFIIFGLLAAGIASTLSSVNFITTFTSVKTIGFVIDRISPAAWSIVLTSFLLLLSL 205
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 75.4 bits (177), Expect = 8e-13
Identities = 50/128 (39%), Positives = 58/128 (45%)
Frame = +1
Query: 28 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 207
G L R L G +IG QI VTA A L PL +GA
Sbjct: 20 GXXFXLXXRXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGA 79
Query: 208 PDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 387
P +A PR+ N+ F + G G VYPP SS +AH +VDL IF
Sbjct: 80 PXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFX 139
Query: 388 LHLAGISS 411
LHLAGISS
Sbjct: 140 LHLAGISS 147
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 71.3 bits (167), Expect = 1e-11
Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXX 177
F I G+ GT++ ++IR EL PG+ L G+ Q++N +V HA
Sbjct: 21 FAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFG 80
Query: 178 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 324
N L+PL++GA D++F R+NNI F +VE+GAGTG TV
Sbjct: 81 NYLLPLMIGASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 68.1 bits (159), Expect = 1e-10
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 6/185 (3%)
Frame = +1
Query: 1 YFGI*SGIIGTSLRLLIRAELGNPGSLI----GDDQIYNTIVTAHAXXXXXXXXXXXXXX 168
Y G +GI+G + +LIR EL G I + IYN +T H
Sbjct: 27 YMGYIAGILGYIISMLIRMELNTQGLAIVRKVKEVTIYNNWITIHGLIMLFVFIMPVGIG 86
Query: 169 XXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI-VENGAGTG*TVYPPLSSN 345
N L+P+++G +++ PR+N I F + + +G T+YPPLS+
Sbjct: 87 FYGNYLIPMLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTR 146
Query: 346 IAHR-GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFL 522
A G ++DL++ +H+ GISS +F + ++ ++ +T+ L
Sbjct: 147 DADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNINIYNFSIIVTSIL 206
Query: 523 LLLSL 537
L+ SL
Sbjct: 207 LIGSL 211
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 67.7 bits (158), Expect = 2e-10
Identities = 47/135 (34%), Positives = 62/135 (45%)
Frame = +1
Query: 7 GI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*L 186
GI S ++G S LL R +L P L D +YN VT H N L
Sbjct: 20 GIFSALLGMSFSLLFRLQLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAIGFFANLL 77
Query: 187 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRS 366
+P PD+ FPR+N + F ++ + A G T YPPLSS S
Sbjct: 78 IPYHCNLPDLLFPRMNALSFWLMPFSLSL-----LLFSMASAGWTFYPPLSS----LSPS 128
Query: 367 VDLAIFSLHLAGISS 411
V+ ++FSLHLAGI+S
Sbjct: 129 VEFSVFSLHLAGIAS 143
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 65.7 bits (153), Expect = 6e-10
Identities = 45/136 (33%), Positives = 60/136 (44%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN* 183
FG+ G IG L LLIR L +P + +YN +VT H N
Sbjct: 120 FGLWGGFIGLGLSLLIRLNLCDPYYNLVSVDVYNYLVTNHGVAMIFFFLMPILIGGFGNY 179
Query: 184 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 363
+P+ L D+ PR+N++ + G G G T+YPPLS G
Sbjct: 180 FLPIFLCLDDLLLPRLNSLSLWLMVPSIFYMELS--LYYGCGIGWTLYPPLSI-WEGSGF 236
Query: 364 SVDLAIFSLHLAGISS 411
VD +FSLHLAG+SS
Sbjct: 237 GVDYLMFSLHLAGVSS 252
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 65.3 bits (152), Expect = 8e-10
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Frame = +1
Query: 1 YFGI*SGIIGTSLRLLIRAELGNPG-SLIGDDQI--YNTIVTAHAXXXXXXXXXXXXXXX 171
+F G G L +++R EL + +I + + YN I T H
Sbjct: 23 WFSFLFGSYGFLLSVILRTELYSSSLRIIAQENVNLYNMIFTIHGIIMIFFNIMPGLFGG 82
Query: 172 XXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIA 351
N +P++ G+P++A+PRIN+I E G GTG T+YPPLS+++
Sbjct: 83 FGNYFLPILCGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLM 142
Query: 352 HRGR-SVDLAIFSLHLAGISS 411
+VD+ IF L ++G++S
Sbjct: 143 SLSPVAVDVIIFGLLVSGVAS 163
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 64.9 bits (151), Expect = 1e-09
Identities = 48/171 (28%), Positives = 70/171 (40%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
++G LLIR EL PG I D YN T H N ++PL+L
Sbjct: 58 LVGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLML 117
Query: 202 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 381
GA D+AFPR+N + ++ G TG T Y P S AH +V +
Sbjct: 118 GAKDVAFPRLNLLSL-YIYLAGAVLALWGMLNGGLDTGWTFYTPYS---AHTTTTVAPVL 173
Query: 382 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 534
F + G SS ++ ++PLFV A+ T+ + +L+
Sbjct: 174 FGAFIIGFSSIVTGINFIVTCHTMRAPGITWFKMPLFVWAIYATSCIQVLA 224
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 64.9 bits (151), Expect = 1e-09
Identities = 35/69 (50%), Positives = 43/69 (62%)
Frame = +1
Query: 331 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 510
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 511 TAFLLLLSL 537
T LLLLSL
Sbjct: 132 TTVLLLLSL 140
Score = 35.1 bits (77), Expect = 1.0
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +3
Query: 165 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 290
W IWKL P NK YKILT PL Y K+N
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 64.9 bits (151), Expect = 1e-09
Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN* 183
FG+ + +G + +L+R EL +PG + + YN+++T+H N
Sbjct: 104 FGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NY 162
Query: 184 LVPLILGAPDIAFPRINNIRF--XXXXXXXXXXXXXXIVE-NGAGTG*TVYPPLS----- 339
L+PL++GA D+AFPRIN I F I E A TG T+Y PLS
Sbjct: 163 LIPLLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYTPLSVGEGM 222
Query: 340 SNIAHRGRSVDLAIFSLHLAGISS 411
N A+ G VDL + LHL+G+S+
Sbjct: 223 GNQANAG--VDLMLLGLHLSGVSA 244
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 64.5 bits (150), Expect = 1e-09
Identities = 49/170 (28%), Positives = 71/170 (41%)
Frame = +1
Query: 25 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 204
+G LLIR EL PG I D YN + T H N L+P+++G
Sbjct: 52 LGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIG 111
Query: 205 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 384
A D+AFP++N + F +V+ GA TG T Y P S+ + V L F
Sbjct: 112 AKDVAFPKLNLLSF-YVYLAGAVVALFGMVQGGADTGWTFYTPYSTTTITKVVPVLLGAF 170
Query: 385 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 534
L G SS + +LPLFV ++ T+ + +L+
Sbjct: 171 IL---GFSSILTGLNFIVTTHTMRAPGMGWTRLPLFVWSIYATSVIQILA 217
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 60.9 bits (141), Expect = 2e-08
Identities = 46/170 (27%), Positives = 68/170 (40%), Gaps = 1/170 (0%)
Frame = +1
Query: 25 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 204
+G + LLIRAEL PG ++ +N + T H N ++PL +G
Sbjct: 55 LGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIG 113
Query: 205 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT-G*TVYPPLSSNIAHRGRSVDLAI 381
APD+AFPR+N F + GA G T+Y PLS I G D+ I
Sbjct: 114 APDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHSPGLGSDMWI 173
Query: 382 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLL 531
+ GI S + ++P+F + + + L LL
Sbjct: 174 VGVGATGIGSVASAINMLTTILCLRAPGMTMFRMPIFTWNIFVVSVLALL 223
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 6e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +1
Query: 289 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 411
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 58.8 bits (136), Expect = 7e-08
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 1/172 (0%)
Frame = +1
Query: 25 IGTSLRLLIRAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
+G L LL+R +L P + IG D+ YN I T H LVPL++
Sbjct: 46 LGGVLALLMRLQLAQPEARFIGPDR-YNQIFTMHGSNMMFLFAVPVMQAMAIY-LVPLMV 103
Query: 202 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 381
G IAFPR+N + V+ G G Y PLS G+ D+
Sbjct: 104 GTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGKRADIWA 163
Query: 382 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
+ +S+ S D++PLFV ++ +T+FL++L++
Sbjct: 164 QMITFTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFVWSMLVTSFLVILAM 215
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 58.4 bits (135), Expect = 1e-07
Identities = 44/171 (25%), Positives = 68/171 (39%)
Frame = +1
Query: 25 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 204
+G LL+R +L P + +++N + T H N VPL++G
Sbjct: 49 VGGFEALLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIG 107
Query: 205 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 384
A D+AFPR+N+ F + + G Y PLSS + VD I
Sbjct: 108 ARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSSLQGVDYWII 167
Query: 385 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
L + GI S S ++PLFV + + A L++L+L
Sbjct: 168 GLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMMLMQAILIILAL 218
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 58.0 bits (134), Expect = 1e-07
Identities = 48/181 (26%), Positives = 74/181 (40%), Gaps = 14/181 (7%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNP-------GSLI-GDDQI-----YNTIVTAHAXXXXXXXXXXXX 162
++G +L +LIR + G P G L+ G+ + Y I T H
Sbjct: 47 LVGGALAMLIRWQWGFPYRPVPLVGRLLFGESGVIGPATYQQIFTTHGLVMIFFAVTPVL 106
Query: 163 XXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS 339
N L+PL++GA D+AFPR+N F G AG G T Y PLS
Sbjct: 107 IGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVLASFFAPLGSAGAGWTTYTPLS 166
Query: 340 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 519
+N+ G L + ++ + G+SS ++ +LPL + + +TA
Sbjct: 167 TNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLRAPGMTYMRLPLTIWGLWLTAI 226
Query: 520 L 522
L
Sbjct: 227 L 227
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 58.0 bits (134), Expect = 1e-07
Identities = 40/164 (24%), Positives = 64/164 (39%)
Frame = +1
Query: 43 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 222
L++RA+L P + D YN I T H N +VPL +GA D+AF
Sbjct: 76 LMMRAQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAF 134
Query: 223 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 402
P +NN+ F ++ G T Y PL+SN G + + L +AG
Sbjct: 135 PYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQIAG 194
Query: 403 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 534
I + + ++P+F IT +++ +
Sbjct: 195 IGTLMTGINFMVTILKMRTKGMTLMRMPMFTWTTLITMVIIVFA 238
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 58.0 bits (134), Expect = 1e-07
Identities = 45/170 (26%), Positives = 68/170 (40%), Gaps = 1/170 (0%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
+I SL LL R +L P S Y VT H N +VPL +
Sbjct: 37 LIAGSLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIMLLWFASPFAFGLA-NYIVPLQI 95
Query: 202 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLA 378
GA D+AFPR+N + + E+GA G T+Y PL++ I G +DLA
Sbjct: 96 GARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYTPGIGLDLA 155
Query: 379 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLL 528
++ L +S + ++P+F ++ T L+L
Sbjct: 156 ALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFTWSILFTVILML 205
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 56.8 bits (131), Expect = 3e-07
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 3/161 (1%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
++G L +++R EL P + + D +YN + T H N L+P ++
Sbjct: 52 LVGGLLAMIVRGELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMI 110
Query: 202 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS--SNIAHRGRSVD 372
GAPD+AFP++N F G A +G YPP+S + + H
Sbjct: 111 GAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPLGHFINGEF 170
Query: 373 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 495
L I ++ L+GISS F ++P+FV
Sbjct: 171 LWILAVALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVFV 211
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 56.4 bits (130), Expect = 4e-07
Identities = 42/171 (24%), Positives = 66/171 (38%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
+IG LL+R +LG P + +YN + T H N +VPL++
Sbjct: 47 LIGGIEALLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMI 105
Query: 202 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 381
GA D+AFPR+N + V G Y PL+ VD I
Sbjct: 106 GARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFAYAPLTQKQFAPTAGVDYWI 165
Query: 382 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 534
+ L G++S + +++PLFV + AF+L+ +
Sbjct: 166 VGIGLTGVASIAGALNFIVTILNMRAPGMTLNRMPLFVWMQLVVAFILIFA 216
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 56.4 bits (130), Expect = 4e-07
Identities = 49/170 (28%), Positives = 65/170 (38%)
Frame = +1
Query: 25 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 204
IG S +R EL P ++YN ++T H N L+PL++G
Sbjct: 44 IGGSFAEAMRTELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVG 102
Query: 205 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 384
D+AFPR+N + F V G T YPPLS G +L I
Sbjct: 103 TEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLSLLSGKWGE--ELWIL 159
Query: 385 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 534
SL L G SS +PLF A+ T+ L+LLS
Sbjct: 160 SLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCWAMLATSSLILLS 209
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 54.0 bits (124), Expect = 2e-06
Identities = 40/169 (23%), Positives = 65/169 (38%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
++G L +LIRA+L P S + YN + T H L+P +L
Sbjct: 45 VVGGVLAMLIRAQLATPRSAFLGPEHYNQVFTMHGTIMMFLFAIPVFEGFAVY-LLPKLL 103
Query: 202 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 381
G+ D+AFPR+ F + +G +YPPLSS + G + D +
Sbjct: 104 GSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGINSDFWL 163
Query: 382 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLL 528
+ IS+ S ++P+F +TA ++L
Sbjct: 164 IGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPIFAWYALVTAVMIL 212
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 53.2 bits (122), Expect = 4e-06
Identities = 35/114 (30%), Positives = 49/114 (42%)
Frame = +1
Query: 70 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 249
PG + D + YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 250 XXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 411
I N T T YPP S N + L +F +HL G SS
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASS 113
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 53.2 bits (122), Expect = 4e-06
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Frame = +1
Query: 43 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 222
LL+R EL + +YN ++T+H N +PL++ A D+AF
Sbjct: 91 LLMRTELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAF 149
Query: 223 PRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 396
PRIN I F ++ A T T+Y PLS ++ +VD+ + LHL
Sbjct: 150 PRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQMS--SPAVDMMMLGLHL 207
Query: 397 AGISS 411
G+S+
Sbjct: 208 TGVSA 212
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 52.4 bits (120), Expect = 6e-06
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +1
Query: 1 YFGI*SGIIGTSLRLLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXX 174
YF + +G+ G +L +IR EL +P S GD Y +VTAH
Sbjct: 69 YFSMVTGLSGAALATMIRMELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGF 128
Query: 175 XN*LVPLILGAPDIAFPRINNIRF 246
N L+P +G+ D+A+PR+N+I F
Sbjct: 129 ANFLIPYHVGSKDVAYPRLNSIGF 152
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 52.4 bits (120), Expect = 6e-06
Identities = 45/166 (27%), Positives = 63/166 (37%), Gaps = 1/166 (0%)
Frame = +1
Query: 43 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 222
LLIR +L P + + YN I+T H N +VPL+LGA D+A
Sbjct: 47 LLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVAL 106
Query: 223 PRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 399
PR+N + GA G T Y P S A VD + ++ L
Sbjct: 107 PRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFS---AQSESGVDFYLAAILLL 163
Query: 400 GISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
G SS S ++P++V +V + L L SL
Sbjct: 164 GFSSLLGNANFVATIYNLRAQGMSLWKMPIYVWSVFAASVLNLFSL 209
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 51.6 bits (118), Expect = 1e-05
Identities = 38/172 (22%), Positives = 67/172 (38%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
I+G L LL+R +L P + D + YN + + H ++PL+L
Sbjct: 52 ILGVILALLMRLQLAVPENDFMDPETYNQVFSMHGITMMFLFAIPVMEGFAVY-IIPLML 110
Query: 202 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 381
G D+ FPR+N + ++ G YPPL+ G +D
Sbjct: 111 GTRDMTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGLGLDFYT 170
Query: 382 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
+ IS+ S +++P+FV AV + +F+++ +L
Sbjct: 171 TVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFAL 222
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 51.2 bits (117), Expect = 1e-05
Identities = 39/152 (25%), Positives = 61/152 (40%), Gaps = 4/152 (2%)
Frame = +1
Query: 94 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 273
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 274 XXXXXIVE-NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXX 441
+ +GA G T YPPLS ++ G + L + + G+SS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTT 205
Query: 442 XXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
+ +LPL + A+ ITA L +L
Sbjct: 206 IIQMRAPGMTMFRLPLTIWAMFITALLQAFAL 237
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 50.8 bits (116), Expect = 2e-05
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHA 126
F I SG+IG+S+ +LIR EL GS++ +QIYNT+VT+HA
Sbjct: 6 FAIWSGLIGSSMSMLIRLELETCGSVLRSEQIYNTLVTSHA 46
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 50.4 bits (115), Expect = 3e-05
Identities = 38/169 (22%), Positives = 67/169 (39%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
+IG L +LIRA+L +P S + Y + T H L+P +L
Sbjct: 45 LIGGILAMLIRAQLASPRSAFVGAETYAQLFTMHGTIMMFLFAIPMFEGLTIY-LLPKML 103
Query: 202 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 381
G+ D+A+PR++ F + +G +YPPL+S + G + D +
Sbjct: 104 GSRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPGINSDFWL 163
Query: 382 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLL 528
+ IS+ S D++P++ +TA ++L
Sbjct: 164 LGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPIYGWYALVTATMIL 212
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 49.2 bits (112), Expect = 6e-05
Identities = 44/166 (26%), Positives = 65/166 (39%), Gaps = 1/166 (0%)
Frame = +1
Query: 37 LRLLIRAELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPD 213
+ +LIR EL G I DD +YNT + H N +PL++GA D
Sbjct: 35 MAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKD 94
Query: 214 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 393
+AFPR+N + + + T YPP S I H + FS+
Sbjct: 95 VAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIMWTGYPPYSI-ITHGNTA--FYTFSVL 151
Query: 394 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLL 531
L G +S +++L +FV A + AF+L L
Sbjct: 152 LLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFVWAT-LAAFVLQL 196
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 48.8 bits (111), Expect = 8e-05
Identities = 36/171 (21%), Positives = 65/171 (38%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
++G + IR +L P + Q YN ++T H N +VPL +
Sbjct: 40 LVGGIEAMFIRIQLAKPENAFLSAQAYNEVMTMHGTTMIFLAAMPLLFALM-NAVVPLQI 98
Query: 202 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 381
GA D++FP +N + F + G T Y LS + +G +D +
Sbjct: 99 GARDVSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTSYASLS--LHSKGHGIDFFV 156
Query: 382 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 534
L ++G+ + ++ +LPLF + + L+L +
Sbjct: 157 LGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLFTWTTFVASALILFA 207
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 47.2 bits (107), Expect = 2e-04
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 178 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAH 354
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--IS 143
Query: 355 RGRSVDLAIFSLHLAGISS 411
+ VDL + + +AG SS
Sbjct: 144 KSIGVDLILLGIIIAGFSS 162
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 46.8 bits (106), Expect = 3e-04
Identities = 36/171 (21%), Positives = 65/171 (38%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
+I LL+R +L P + + YN + T H L+PL++
Sbjct: 71 LIAGVFALLVRLQLMVPENTFLSSETYNQLFTMHGTIMMFLFAIPMLEGFAVY-LIPLMI 129
Query: 202 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 381
GA D+ FPR+ + + + G +Y PLS++ G S D +
Sbjct: 130 GARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGLSADFWL 189
Query: 382 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 534
+ LA I+S S ++P+ + + TAF++ ++
Sbjct: 190 IGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWYLLATAFMIAIA 240
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 46.8 bits (106), Expect = 3e-04
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 2/107 (1%)
Frame = +1
Query: 19 GIIGTSLRLLIRAELGNPGSL-IGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 195
G++ L L+R +LG PG+ D Y +T H N L+PL
Sbjct: 53 GLVALVLSWLMRLQLGFPGTFSFIDANQYLQFITMHGMIMVIYLLTALFLGGFGNYLIPL 112
Query: 196 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPP 333
++GA D+ FP +N + + V G G G T+YPP
Sbjct: 113 MVGARDMVFPYVNMLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPP 159
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 46.4 bits (105), Expect = 4e-04
Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 1/172 (0%)
Frame = +1
Query: 25 IGTSLRLLIRAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
+G +L LLIRAEL PG+ I D +N + T H N VP+++
Sbjct: 37 LGGALALLIRAELFFPGTQFIADSMTFNRMFTVHGTTLIFLFILPFASAVG-NYFVPIMV 95
Query: 202 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 381
D+A+P++N I F + T PP S I+ G + D+ I
Sbjct: 96 RYKDMAYPKLNAIAFWMIPPAGALVWLGFADFSWYAT-----PPYSV-ISAPGPAADMWI 149
Query: 382 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
F L + GISS S Q+PL + ++ ++L++L
Sbjct: 150 FGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYLSSSLIVLVAL 201
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 44.8 bits (101), Expect = 0.001
Identities = 27/78 (34%), Positives = 39/78 (50%)
Frame = +1
Query: 178 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 357
N +VPL +GA D+AFP +N++ F V N A TG YPPL+
Sbjct: 125 NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLAELGFSP 184
Query: 358 GRSVDLAIFSLHLAGISS 411
VD I++L ++GI +
Sbjct: 185 DVGVDYYIWALQISGIGT 202
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 44.8 bits (101), Expect = 0.001
Identities = 27/78 (34%), Positives = 38/78 (48%)
Frame = +1
Query: 178 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 357
N VPL +GA D+AFP +N++ F V A TG YPPL+
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSP 183
Query: 358 GRSVDLAIFSLHLAGISS 411
G VD I++L L+G+ +
Sbjct: 184 GVGVDYYIWALQLSGLGT 201
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 44.0 bits (99), Expect = 0.002
Identities = 40/171 (23%), Positives = 61/171 (35%)
Frame = +1
Query: 25 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 204
+G L L IR +L P + YN ++T HA N +PL LG
Sbjct: 49 LGGLLALAIRVQLALPEQTLLVGTTYNQVLTMHAAIMLFFFLIPLGLFGFGNYFLPLQLG 108
Query: 205 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 384
D+A PR+N G T Y PL+ + G SV +
Sbjct: 109 VRDVALPRLNTFAVWLFIASLILVVLGLFNGGAPSVGWTFYYPLTMDGNQTGVSVFMV-- 166
Query: 385 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
++ L G+ S ++P+F ++ T+ L LL+L
Sbjct: 167 AVILNGLGSLLGSANFAATIVNLRAPGMGLWKMPVFAWSIFATSILQLLTL 217
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 44.0 bits (99), Expect = 0.002
Identities = 31/120 (25%), Positives = 49/120 (40%)
Frame = +1
Query: 178 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 357
N +VPL +GA D+AFP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 358 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
G VD I+SL LA + S +PLF TA +++ ++
Sbjct: 204 GIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTALCTAIMMIFAM 263
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 43.2 bits (97), Expect = 0.004
Identities = 29/119 (24%), Positives = 50/119 (42%)
Frame = +1
Query: 178 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 357
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 358 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 534
VD +S+ ++GI + F+++ +F+ + L+L+S
Sbjct: 179 WVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKLFFNKISIFMWTCLCSNILILIS 237
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 41.5 bits (93), Expect = 0.012
Identities = 42/170 (24%), Positives = 67/170 (39%), Gaps = 4/170 (2%)
Frame = +1
Query: 37 LRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 216
LR ++ + G L + + Y +VT H N L+PL +GA D+
Sbjct: 83 LRPILGGWITEAGKL--EPEFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDM 140
Query: 217 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG-*TVYPPLSS---NIAHRGRSVDLAIF 384
A +N + + +E G +G +YPPLS+ ++ G + + +
Sbjct: 141 ASGFMNMLSYWFFFGSSVIMFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLI 200
Query: 385 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 534
S+ L IS SF +LPL + A ITA + LLS
Sbjct: 201 SMALFIISVLLGGINYITTVINLRVKGMSFTRLPLTIWAFFITAIIGLLS 250
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 40.3 bits (90), Expect = 0.027
Identities = 33/151 (21%), Positives = 53/151 (35%), Gaps = 3/151 (1%)
Frame = +1
Query: 94 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 273
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 274 XXXXXIVENGAGTG*TVYP---PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 444
G G T YP L+ G + + + G SS
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTI 209
Query: 445 XXXXXXXXSFDQLPLFV*AVGITAFLLLLSL 537
+F +LP+ + + ITA L +L
Sbjct: 210 INMRAPGMTFFRLPMTIWGLFITAILQAFAL 240
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 40.3 bits (90), Expect = 0.027
Identities = 30/107 (28%), Positives = 43/107 (40%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
+ G L LL R EL + G+ + YN V+ H N LVPL +
Sbjct: 38 VFGGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFWFISPFAFGFA-NYLVPLQI 96
Query: 202 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSS 342
GA D+AFPR+N + + G T+Y PL++
Sbjct: 97 GADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMYAPLNT 143
>UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=2;
Saccharomycetaceae|Rep: Putative COX1/OXI3 intron 2
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 854
Score = 40.3 bits (90), Expect = 0.027
Identities = 19/39 (48%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHA 126
SG+ GT++ L+IR EL PGS L G+ Q++N +V HA
Sbjct: 25 SGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHA 63
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 39.5 bits (88), Expect = 0.048
Identities = 40/178 (22%), Positives = 67/178 (37%), Gaps = 1/178 (0%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNP-GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN 180
F I +GI+G L++R +L P L+G D YN I T H
Sbjct: 53 FFILAGILG----LIMRTQLAVPENDLVGQD-FYNQIFTVHGTTMMFLFAVPVVEALGVM 107
Query: 181 *LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRG 360
L+P +L A D+ FPR++ + G +YPPL+ G
Sbjct: 108 -LLPQMLAARDLPFPRLSAFAIWAYIVGGLVFFSTVFYDLAPKGGWFMYPPLTLKEYSPG 166
Query: 361 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 534
+ D + + IS+ S ++P+F A+ I A +++++
Sbjct: 167 DNADFWLLGIGFIEISAIAGAIEIIVGTLRTRPPGMSLTRMPIFAWAMLIFAAMIMIA 224
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 39.1 bits (87), Expect = 0.063
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = +3
Query: 222 PTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 392
P NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 38.7 bits (86), Expect = 0.084
Identities = 35/158 (22%), Positives = 59/158 (37%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
++G L++R +L P + + Y+++ T H N L PL+L
Sbjct: 65 LLGGVEALVMRIQLARPNATVLTPAQYDSLFTMHGVTMIFLYALPVLSGFA-NYLWPLML 123
Query: 202 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 381
G+ D+AFPR+ + + G Y PL+S G ++D+
Sbjct: 124 GSRDMAFPRLTAFSYWSFLFAGLFLYASFPLGAVPDGGWFNYVPLTSLDYSAGANIDIYG 183
Query: 382 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 495
+ L GIS+ S D+LP+ V
Sbjct: 184 LGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIV 221
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 37.1 bits (82), Expect = 0.26
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
++G ++R +L PG + + +N + T HA N +PL++
Sbjct: 45 LVGGLEAWIMRLQLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMI 103
Query: 202 GAPDIAFPRIN 234
GA D+AFPR+N
Sbjct: 104 GARDVAFPRLN 114
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 36.7 bits (81), Expect = 0.34
Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 1/108 (0%)
Frame = +1
Query: 184 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRG 360
L+PL +G+ D+ +PR+N + + + G TG TVY PLSS
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPY 170
Query: 361 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 504
D A ++ L GI + LPLFV AV
Sbjct: 171 LGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPLFVWAV 218
>UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia
polymorpha|Rep: CoxI intron2 ORF - Marchantia polymorpha
(Liverwort)
Length = 802
Score = 35.5 bits (78), Expect = 0.78
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGSLI--GDDQIYN 105
FG +G++GT +LIR EL PG+ I G+ Q+YN
Sbjct: 24 FGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|Rep:
Maturase-like protein - Pellia epiphylla
Length = 843
Score = 35.5 bits (78), Expect = 0.78
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +1
Query: 4 FGI*SGIIGTSLRLLIRAELGNPGSLI--GDDQIYN 105
FG +G++GT +LIR EL PG+ I G+ Q+YN
Sbjct: 24 FGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_P03877 Cluster: Intron-encoded DNA endonuclease aI3
precursor (DNA endonuclease I- SceIII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI3 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceIII)]; n=5; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI3 precursor (DNA
endonuclease I- SceIII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI3 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceIII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 403
Score = 35.5 bits (78), Expect = 0.78
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIV 114
SG+ GT++ L+IR EL PGS L G+ Q++N +V
Sbjct: 25 SGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLV 59
>UniRef50_A5H2T8 Cluster: Cytochrome c oxidase subunit 1; n=1;
Pichia guilliermondii|Rep: Cytochrome c oxidase subunit
1 - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 168
Score = 34.3 bits (75), Expect = 1.8
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAEL--GNPGSLIGDDQIYNTIVTAHA 126
+ ++GT + ++IR EL GN G++Q YN ++T HA
Sbjct: 3 ASMVGTGMSVIIRMELSSGNSQFFHGNNQAYNVLITGHA 41
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 34.3 bits (75), Expect = 1.8
Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Frame = +1
Query: 178 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS-SNIAH 354
N LVP ++GA D+ +P+IN + F ++ G +Y PLS +
Sbjct: 80 NYLVPRMIGAHDLYWPKINALSFWMLVPAVILAAISPLL-GAVDLGWYMYAPLSVETTVN 138
Query: 355 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLLLS 534
G +L +L L+G+SS + ++PLFV TA L++++
Sbjct: 139 YGLGTNLIQIALILSGLSS--TLTGVNFVMTITKMKKVPYLKMPLFVWGFFTTAILMIIA 196
Query: 535 L 537
+
Sbjct: 197 M 197
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 33.5 bits (73), Expect = 3.1
Identities = 27/125 (21%), Positives = 48/125 (38%)
Frame = +1
Query: 37 LRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 216
L +L+R +L PG+ +N T H L+P +LGA D+
Sbjct: 78 LAVLMRVQLAVPGNDFLSADRFNQFFTMHGSAMMFLFAVPMFEAISII-LLPALLGARDL 136
Query: 217 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 396
FPR++ + + + +G +YPPL++ G D+ + L
Sbjct: 137 PFPRLSAYGYWCFLIGGVFVMGSILFDAAPKSGWFMYPPLATQ--DEGLGSDIWLLGLSF 194
Query: 397 AGISS 411
++S
Sbjct: 195 IEVAS 199
>UniRef50_P03875 Cluster: Putative COX1/OXI3 intron 1 protein; n=1;
Saccharomyces cerevisiae|Rep: Putative COX1/OXI3 intron
1 protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 834
Score = 33.5 bits (73), Expect = 3.1
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTA 120
SG+ GT++ L+IR EL PGS L G+ Q++N T+
Sbjct: 25 SGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNGAPTS 61
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 33.1 bits (72), Expect = 4.2
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = +1
Query: 64 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 243
G PG ++ + Y +++T H N +P+ +GA D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 244 FXXXXXXXXXXXXXXIVENGAG-TG*TVYPPLSS 342
F + +G +G T Y LS+
Sbjct: 134 FWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSA 167
>UniRef50_Q8ID15 Cluster: Putative uncharacterized protein
MAL13P1.352; n=2; Plasmodium|Rep: Putative
uncharacterized protein MAL13P1.352 - Plasmodium
falciparum (isolate 3D7)
Length = 1106
Score = 32.3 bits (70), Expect = 7.3
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 255 TPLPYIINFKKNCRKWCRN 311
T L Y + KK+CRKWCRN
Sbjct: 697 TKLMYCVIKKKHCRKWCRN 715
>UniRef50_Q0BZ17 Cluster: Amidohydrolase family/endoribonuclease
L-PSP; n=1; Hyphomonas neptunium ATCC 15444|Rep:
Amidohydrolase family/endoribonuclease L-PSP -
Hyphomonas neptunium (strain ATCC 15444)
Length = 755
Score = 31.9 bits (69), Expect = 9.6
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 320 VHPVPAPFSTILLEINNIREGGRSQNLILFIRGNAISG-APSIRG 189
+H AP+S + + + ++R+G S ++ + GN I+G AP + G
Sbjct: 164 LHRYGAPYSILNVRVLDVRDGSLSAPSVVTVSGNVITGVAPYVEG 208
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 387,967,462
Number of Sequences: 1657284
Number of extensions: 6042295
Number of successful extensions: 11779
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 11267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11643
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34156095254
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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