Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0388
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   5.3  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   7.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.1  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   9.3  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   9.3  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   9.3  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   9.3  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 77  QHIELRFQYKQEILKNRSNPRADSC 3
           +H++ R     E+LKN S    D C
Sbjct: 84  KHLDFRNSATAELLKNPSLSSPDEC 108


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 77  QHIELRFQYKQEILKNRSNPRADSC 3
           +H++ R     E+LKN S    D C
Sbjct: 84  KHLDFRNSATAELLKNPSLSSPDEC 108


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = +3

Query: 324 YTLFISIFSCFYYFAKFYLNTWNQIFTR 407
           YT    + S    F  ++ N W  +F+R
Sbjct: 51  YTYIKLVVSVLMDFIAYFFNFWTILFSR 78


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 321 LYTLFISIFSCFYYFAKFYL 380
           L+T+ + +  C YYF   +L
Sbjct: 247 LFTVHLLLLVCIYYFYYMHL 266


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -1

Query: 255 NELWYNCSKCKFH*SVIICS 196
           N + YN    KF    IICS
Sbjct: 347 NPILYNLMSSKFRTGFIICS 366


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 224 NSTDLL*FAVVCRFKMNNLLRFRKLTQQTLHNQN 123
           N  DLL  AV  R ++N  L    L+   LH Q+
Sbjct: 103 NVDDLLSVAVYARDRVNPYLFSYALSVAILHRQD 136


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -3

Query: 472 IINICSAI-ERIHPIHETSFHNSLVNIWFQVFK 377
           + ++C  + E++  I  TSF N+   I FQVF+
Sbjct: 274 LCHLCFLLDEKLSYIILTSFLNNFYFIIFQVFE 306


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 520 HPYGVSKNQFNYIV 561
           HPY + KNQ  Y V
Sbjct: 300 HPYQIIKNQLVYDV 313


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,224
Number of Sequences: 336
Number of extensions: 3769
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)