Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0388
         (681 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC030783-1|AAH30783.1|  828|Homo sapiens glycerol-3-phosphate ac...    31   5.0  
AL833093-1|CAD89932.1|  828|Homo sapiens hypothetical protein pr...    31   5.0  
AL391986-2|CAH73717.1|  710|Homo sapiens glycerol 3-phosphate ac...    31   5.0  
AL391986-1|CAH73716.1|  828|Homo sapiens glycerol 3-phosphate ac...    31   5.0  
AL833061-1|CAD89967.1|  828|Homo sapiens hypothetical protein pr...    30   6.6  
AK172799-1|BAD18772.1|  828|Homo sapiens protein ( Homo sapiens ...    30   6.6  

>BC030783-1|AAH30783.1|  828|Homo sapiens glycerol-3-phosphate
           acyltransferase, mitochondrial protein.
          Length = 828

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 391 TKYSLGNCETRFHEWGESVLSHYIY*LLVIEW*DKCITR-NPFI 519
           ++YS+G C+    EWGE      I+    ++W +  ++R  PF+
Sbjct: 20  SEYSVGRCKHTSEEWGECGFRPTIFRSATLKWKESLMSRKRPFV 63


>AL833093-1|CAD89932.1|  828|Homo sapiens hypothetical protein
           protein.
          Length = 828

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 391 TKYSLGNCETRFHEWGESVLSHYIY*LLVIEW*DKCITR-NPFI 519
           ++YS+G C+    EWGE      I+    ++W +  ++R  PF+
Sbjct: 20  SEYSVGRCKHTSEEWGECGFRPTIFRSATLKWKESLMSRKRPFV 63


>AL391986-2|CAH73717.1|  710|Homo sapiens glycerol 3-phosphate
           acyltransferase, mitochondrial (KIAA1560) protein.
          Length = 710

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 391 TKYSLGNCETRFHEWGESVLSHYIY*LLVIEW*DKCITR-NPFI 519
           ++YS+G C+    EWGE      I+    ++W +  ++R  PF+
Sbjct: 20  SEYSVGRCKHTSEEWGECGFRPTIFRSATLKWKESLMSRKRPFV 63


>AL391986-1|CAH73716.1|  828|Homo sapiens glycerol 3-phosphate
           acyltransferase, mitochondrial (KIAA1560) protein.
          Length = 828

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 391 TKYSLGNCETRFHEWGESVLSHYIY*LLVIEW*DKCITR-NPFI 519
           ++YS+G C+    EWGE      I+    ++W +  ++R  PF+
Sbjct: 20  SEYSVGRCKHTSEEWGECGFRPTIFRSATLKWKESLMSRKRPFV 63


>AL833061-1|CAD89967.1|  828|Homo sapiens hypothetical protein
           protein.
          Length = 828

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 391 TKYSLGNCETRFHEWGESVLSHYIY*LLVIEW*DKCITR-NPFI 519
           ++YS+G C+    EWGE      ++    ++W +  ++R  PF+
Sbjct: 20  SEYSVGRCKHTSEEWGECGFRPTVFRSATLKWKESLMSRKRPFV 63


>AK172799-1|BAD18772.1|  828|Homo sapiens protein ( Homo sapiens
           cDNA FLJ23960 fis, clone HEP14724, highly similar to
           Glycerol-3-phosphate acyltransferase, mitochondrial
           precursor (EC ).
          Length = 828

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 391 TKYSLGNCETRFHEWGESVLSHYIY*LLVIEW*DKCITR-NPFI 519
           ++YS+G C+    EWGE      ++    ++W +  ++R  PF+
Sbjct: 20  SEYSVGRCKHTSEEWGECGFRPTVFRSATLKWKESLMSRKRPFV 63


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,211,166
Number of Sequences: 237096
Number of extensions: 2045154
Number of successful extensions: 6701
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6701
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)