Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0387
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 41 7e-04
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 41 7e-04
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 41 7e-04
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 41 7e-04
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 41 7e-04
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 41 7e-04
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 34 0.11
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 34 0.11
U64600-4|AAK39201.1| 299|Caenorhabditis elegans C.elegans homeo... 31 0.58
Z81554-1|CAB04506.1| 838|Caenorhabditis elegans Hypothetical pr... 31 1.0
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 30 1.3
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 30 1.8
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 29 2.3
Z46935-1|CAA87049.2| 519|Caenorhabditis elegans Hypothetical pr... 29 3.1
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 3.1
U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical pr... 29 3.1
U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 3.1
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 3.1
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 3.1
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 3.1
U41272-9|AAA82452.4| 1256|Caenorhabditis elegans Prion-like-(q/n... 29 4.1
Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z73972-6|CAI46600.1| 262|Caenorhabditis elegans Hypothetical pr... 28 7.1
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 28 7.1
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 28 7.1
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 28 7.1
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 28 7.1
AC084159-12|ABO16466.1| 377|Caenorhabditis elegans F-box a prot... 28 7.1
Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z74029-2|CAA98432.1| 334|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z71185-6|CAI46563.1| 286|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical pr... 27 9.4
U80840-6|AAB37934.1| 317|Caenorhabditis elegans Hypothetical pr... 27 9.4
U50311-8|AAA92312.1| 145|Caenorhabditis elegans Hypothetical pr... 27 9.4
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele... 27 9.4
AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc... 27 9.4
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -2
Query: 515 IQCFNCCRFGHTKVQCRSKPR-CFKCG-QGHTGDTC 414
++CFNC GH +C PR CF CG QGH + C
Sbjct: 242 MKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 277
Score = 31.1 bits (67), Expect = 0.77
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 7/42 (16%)
Frame = -2
Query: 509 CFNCCRFGHTKVQC-----RSKPR-CFKCGQ-GHTGDTCNVE 405
CFNC + GH C +PR C+ C Q GHT C E
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEE 201
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -2
Query: 515 IQCFNCCRFGHTKVQCRSKPR-CFKCG-QGHTGDTC 414
++CFNC GH +C PR CF CG QGH + C
Sbjct: 453 MKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 7/42 (16%)
Frame = -2
Query: 509 CFNCCRFGHTKVQC-----RSKPR-CFKCGQ-GHTGDTCNVE 405
CFNC + GH C +PR C+ C Q GH C E
Sbjct: 259 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEE 300
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 7/42 (16%)
Frame = -2
Query: 509 CFNCCRFGHTKVQC-----RSKPR-CFKCGQ-GHTGDTCNVE 405
CFNC + GH C +PR C+ C Q GH C E
Sbjct: 373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEE 414
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -2
Query: 515 IQCFNCCRFGHTKVQCRSKPR-CFKCG-QGHTGDTC 414
++CFNC GH +C PR CF CG QGH + C
Sbjct: 453 MKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 7/42 (16%)
Frame = -2
Query: 509 CFNCCRFGHTKVQC-----RSKPR-CFKCGQ-GHTGDTCNVE 405
CFNC + GH C +PR C+ C Q GH C E
Sbjct: 259 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEE 300
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 7/42 (16%)
Frame = -2
Query: 509 CFNCCRFGHTKVQC-----RSKPR-CFKCGQ-GHTGDTCNVE 405
CFNC + GH C +PR C+ C Q GH C E
Sbjct: 373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEE 414
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -2
Query: 515 IQCFNCCRFGHTKVQCRSKPR-CFKCG-QGHTGDTC 414
++CFNC GH +C PR CF CG QGH + C
Sbjct: 242 MKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 277
Score = 31.1 bits (67), Expect = 0.77
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 7/42 (16%)
Frame = -2
Query: 509 CFNCCRFGHTKVQC-----RSKPR-CFKCGQ-GHTGDTCNVE 405
CFNC + GH C +PR C+ C Q GHT C E
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEE 201
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -2
Query: 515 IQCFNCCRFGHTKVQCRSKPR-CFKCG-QGHTGDTC 414
++CFNC GH +C PR CF CG QGH + C
Sbjct: 242 MKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 277
Score = 31.1 bits (67), Expect = 0.77
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 7/42 (16%)
Frame = -2
Query: 509 CFNCCRFGHTKVQC-----RSKPR-CFKCGQ-GHTGDTCNVE 405
CFNC + GH C +PR C+ C Q GHT C E
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEE 201
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -2
Query: 515 IQCFNCCRFGHTKVQCRSKPR-CFKCG-QGHTGDTC 414
++CFNC GH +C PR CF CG QGH + C
Sbjct: 453 MKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 7/42 (16%)
Frame = -2
Query: 509 CFNCCRFGHTKVQC-----RSKPR-CFKCGQ-GHTGDTCNVE 405
CFNC + GH C +PR C+ C Q GH C E
Sbjct: 259 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEE 300
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 7/42 (16%)
Frame = -2
Query: 509 CFNCCRFGHTKVQC-----RSKPR-CFKCGQ-GHTGDTCNVE 405
CFNC + GH C +PR C+ C Q GH C E
Sbjct: 373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEE 414
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -2
Query: 509 CFNCCRFGHTKVQCRSKPR-CFKCGQ-GHTGDTC 414
CFNC ++GH +C + R C CG H + C
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANEC 237
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -2
Query: 509 CFNCCRFGHTKVQCRSKPR-CFKCGQ-GHTGDTC 414
CFNC ++GH +C + R C CG H + C
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANEC 237
>U64600-4|AAK39201.1| 299|Caenorhabditis elegans C.elegans homeobox
protein 30 protein.
Length = 299
Score = 31.5 bits (68), Expect = 0.58
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = -2
Query: 362 ASSKKCPEYVRQTDIKVT-MAENSLSYIEASKLHPPISKSFADIVSSLPTKSVPGGNTVL 186
AS+ C + + +++ + E S + S H P +S S+ P S PGG+ +
Sbjct: 90 ASTSPCNKISSSSSFRISDILEQSPNNSSHSNDHDPSPQSIKSDFSTSPRASSPGGDRM- 148
Query: 185 PGSPSSRTISYK-KTVFT 135
GSP S S K +T+FT
Sbjct: 149 -GSPGSCKKSRKARTIFT 165
>Z81554-1|CAB04506.1| 838|Caenorhabditis elegans Hypothetical
protein F57G4.1 protein.
Length = 838
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Frame = -3
Query: 286 ILKRQNYIPPFLNHLLILYPLSQLNLFLVEIQYCLVHHPHVQYLIKKQSSL---NPELLL 116
I K QN++ F +HL I+ LS N F+ + + ++++ ++L K +S+L NP L +
Sbjct: 72 IFKNQNFMEFFFSHLTII--LSSTN-FISYLSFSIINNSTSKFLEKLKSTLSTKNPALKV 128
Query: 115 N 113
N
Sbjct: 129 N 129
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -2
Query: 509 CFNCCRFGHTKVQCRSKPR-CFKC-GQGHT 426
CF C R GH + +C S+PR C C G HT
Sbjct: 348 CFGCLRSGHQRSKC-SRPRTCNHCKGNHHT 376
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 6/39 (15%)
Frame = -2
Query: 512 QCFNCCRFGHTKVQC-----RSKPRCFKCGQ-GHTGDTC 414
+C+NC R GH +C + RC++C + GH C
Sbjct: 108 KCYNCGRSGHISRECTESGSAEEKRCYQCQETGHISRDC 146
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 29.5 bits (63), Expect = 2.3
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = -2
Query: 230 SSLPTKSVPGGNTVLPGSPSSRTISYKKTVFTKPRTPPQHSKGFDHVAHESLVR-DYNMP 54
+S P SV N PG+ S + S + P+ PP F+ SL+ P
Sbjct: 51 TSSPGSSVGTSNAHSPGTSPSTSASGASGI---PQPPPL-PYWFNRECKSSLMMIGPQPP 106
Query: 53 EPSNGCALPSSSNAN 9
PS+G ++PSSS+ N
Sbjct: 107 GPSSGMSMPSSSSTN 121
>Z46935-1|CAA87049.2| 519|Caenorhabditis elegans Hypothetical
protein M106.2 protein.
Length = 519
Score = 29.1 bits (62), Expect = 3.1
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Frame = -2
Query: 326 TDIKVTMAENSLSYIEASKLHPPISKSFA-----DIVSSLPTKSVPGGNTVLP---GSPS 171
T + T A+N L YI+A+ + P +S A + S +K + + P P
Sbjct: 143 TPVSTTTADNILDYIKATHVSPSLSVDAALQQARALTKSPISKKITSRSATAPSVYAIPH 202
Query: 170 SRTISYKKTVFTKPRTPP 117
S T S + T P PP
Sbjct: 203 SSTASPPQIAITHPIQPP 220
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 29.1 bits (62), Expect = 3.1
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 5/121 (4%)
Frame = -2
Query: 362 ASSKKCPEYVRQTDIKVTMAENSL----SYIEASKLHPPISKSFADIVSSLPTKSVPGGN 195
ASS P T T + S S I S H +SK+ + S+ P+ + G+
Sbjct: 1409 ASSSPVPSQTSSTPTNPTGSTESSTLLSSTISGSTQHTTMSKASSG--STSPSTNSQTGS 1466
Query: 194 TVLPGSPSSRTISYKKTVFTKPR-TPPQHSKGFDHVAHESLVRDYNMPEPSNGCALPSSS 18
TV GS S+ +S T+P+ + Q S VA + + PS+ + S+S
Sbjct: 1467 TVTMGSSSTSGVSTSSASSTQPQMSTSQGSSAGSTVASSTASPAASSTAPSSTGTMSSTS 1526
Query: 17 N 15
+
Sbjct: 1527 S 1527
>U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical
protein D1044.2c protein.
Length = 1090
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 7/37 (18%)
Frame = -2
Query: 464 SKPRCFKCGQGHTGDTCNVE-------EDCVSCCLCS 375
S+ R C G GDTC+ E DC CC CS
Sbjct: 300 SELRVISCKSGIKGDTCDQECSNGEWGPDCAYCCHCS 336
>U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical
protein D1044.2a protein.
Length = 1051
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 7/37 (18%)
Frame = -2
Query: 464 SKPRCFKCGQGHTGDTCNVE-------EDCVSCCLCS 375
S+ R C G GDTC+ E DC CC CS
Sbjct: 300 SELRVISCKSGIKGDTCDQECSNGEWGPDCAYCCHCS 336
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 446 KCGQGHTGDTCNVEEDCVSCCLCSGLHFASSKKC 345
+C QG TG CNV + C+ CS F KC
Sbjct: 324 ECRQGFTGANCNVLDVCLGDAACS--MFGPLAKC 355
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 446 KCGQGHTGDTCNVEEDCVSCCLCSGLHFASSKKC 345
+C QG TG CNV + C+ CS F KC
Sbjct: 324 ECRQGFTGANCNVLDVCLGDAACS--MFGPLAKC 355
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 446 KCGQGHTGDTCNVEEDCVSCCLCSGLHFASSKKC 345
+C QG TG CNV + C+ CS F KC
Sbjct: 324 ECRQGFTGANCNVLDVCLGDAACS--MFGPLAKC 355
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 446 KCGQGHTGDTCNVEEDCVSCCLCSGLHFASSKKC 345
+C QG TG CNV + C+ CS F KC
Sbjct: 324 ECRQGFTGANCNVLDVCLGDAACS--MFGPLAKC 355
>U41272-9|AAA82452.4| 1256|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 62
protein.
Length = 1256
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 193 QYCLVHHPHVQYLIKKQSSLNPELLLNTV 107
Q+ HHPHV + QS ++ E + TV
Sbjct: 988 QFLEFHHPHVPQRVSSQSDVDMEAIFKTV 1016
>Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical
protein C25F9.2 protein.
Length = 1469
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = -2
Query: 509 CFNCCRFGHTKVQCRSKPRCFKCGQGHTGDTCNVEEDCVSCCLCSGLHFASSKKCPE 339
C+ C F + K +C CG +TC D + C C+ ++F S+ C E
Sbjct: 466 CYKCATFANDNHYLYCKAKCMNCGT----NTCEPGNDKIVCGECN-VYF-KSQDCYE 516
>Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.2 protein.
Length = 297
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -2
Query: 485 HTKVQC-RSKPRCFKCGQGHTGDTCNV 408
H +QC R +P C KC +G G T ++
Sbjct: 134 HAPIQCPRQQPGCVKCPRGPAGPTGSI 160
>Z73972-6|CAI46600.1| 262|Caenorhabditis elegans Hypothetical
protein F15H10.10 protein.
Length = 262
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3
Query: 199 EIQYCLVHHPHVQYLIKKQSSLNPELLLNTVK 104
E+ + HP +QY I+++ LN LL+TV+
Sbjct: 116 ELSQLFLSHPLIQYEIRQRIPLNNSKLLSTVE 147
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 7/61 (11%)
Frame = -2
Query: 509 CFNCCRFGHTKVQCRSKPRCFKCGQGHTGDTCN--VEE-----DCVSCCLCSGLHFASSK 351
C CR QC ++ C G GD C+ E+ DC+ C C G +S
Sbjct: 772 CRQVCRCTSEYKQCNAQTGECSCPAGFQGDRCDKPCEDGYYGPDCIKKCKCQGTATSSCN 831
Query: 350 K 348
+
Sbjct: 832 R 832
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 7/61 (11%)
Frame = -2
Query: 509 CFNCCRFGHTKVQCRSKPRCFKCGQGHTGDTCN--VEE-----DCVSCCLCSGLHFASSK 351
C CR QC ++ C G GD C+ E+ DC+ C C G +S
Sbjct: 772 CRQVCRCTSEYKQCNAQTGECSCPAGFQGDRCDKPCEDGYYGPDCIKKCKCQGTATSSCN 831
Query: 350 K 348
+
Sbjct: 832 R 832
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 7/61 (11%)
Frame = -2
Query: 509 CFNCCRFGHTKVQCRSKPRCFKCGQGHTGDTCN--VEE-----DCVSCCLCSGLHFASSK 351
C CR QC ++ C G GD C+ E+ DC+ C C G +S
Sbjct: 772 CRQVCRCTSEYKQCNAQTGECSCPAGFQGDRCDKPCEDGYYGPDCIKKCKCQGTATSSCN 831
Query: 350 K 348
+
Sbjct: 832 R 832
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 7/61 (11%)
Frame = -2
Query: 509 CFNCCRFGHTKVQCRSKPRCFKCGQGHTGDTCN--VEE-----DCVSCCLCSGLHFASSK 351
C CR QC ++ C G GD C+ E+ DC+ C C G +S
Sbjct: 772 CRQVCRCTSEYKQCNAQTGECSCPAGFQGDRCDKPCEDGYYGPDCIKKCKCQGTATSSCN 831
Query: 350 K 348
+
Sbjct: 832 R 832
>AC084159-12|ABO16466.1| 377|Caenorhabditis elegans F-box a protein
protein 222 protein.
Length = 377
Score = 27.9 bits (59), Expect = 7.1
Identities = 8/37 (21%), Positives = 19/37 (51%)
Frame = +3
Query: 465 PTLDLGVPKAATIKALDGWVYIQFNRHRIITHKYTFG 575
P +D A + + W +++F++H I+ ++ G
Sbjct: 107 PEIDAAAHSAVSFRMCRDWTFLEFSKHEIVYREFEGG 143
>Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical
protein K01G5.1 protein.
Length = 384
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = -2
Query: 452 CFKCGQGHTGDTCNVEEDCVSCCLCSGLHFASSKKCPEYVRQTDIKVTMAENSLSYIEAS 273
CF CG D + C C+ F S KCP + T+ + A+ L+Y++
Sbjct: 241 CFICGNPFV-DPIVTKCKHYFCTGCALKSFQKSSKCPICQQNTENIMNTAKELLTYLKRK 299
Query: 272 K 270
K
Sbjct: 300 K 300
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Frame = -2
Query: 512 QCFNCCRFGHTKVQCRSKPRCFKCGQGHTGDTCNVEEDCVSCC---LCSGLHFASSKKC 345
QC N C T + S P C C Q C C+ C CS L S C
Sbjct: 72 QCSNQCNQQCTSITISSGPSCSSC-QSACSSACTT-PTCIRTCQRNSCSNLCNTGSNSC 128
>Z74029-2|CAA98432.1| 334|Caenorhabditis elegans Hypothetical
protein C45B11.4 protein.
Length = 334
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 271 NYIPPFLNHLLILYPLSQLNLFLVEIQYCLVHHPHVQYLIK 149
NY LN+ ++L+ + F+ L+HHP+ Q+LI+
Sbjct: 286 NYYDQSLNNFIVLF--ISFHDFVSTFIIILIHHPYRQFLIQ 324
>Z71185-6|CAI46563.1| 286|Caenorhabditis elegans Hypothetical
protein C35A5.10 protein.
Length = 286
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/58 (27%), Positives = 24/58 (41%)
Frame = -2
Query: 497 CRFGHTKVQCRSKPRCFKCGQGHTGDTCNVEEDCVSCCLCSGLHFASSKKCPEYVRQT 324
C GH+ C + C +C G + C ++ DC + C G + CP V T
Sbjct: 205 CPSGHS---CVAGNVCCRCPVGSSAGNCILQSDCSAGYECMGTGYC----CPSQVLST 255
>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 9/55 (16%)
Frame = -2
Query: 503 NCCRFGHTKVQCRSKPRCFKC--GQGHTGDTCN-------VEEDCVSCCLCSGLH 366
N C G + R + + F+C G+ G+ CN +EE CV+ C LH
Sbjct: 199 NICNHGRC-IPNRDEDKNFRCVCDSGYEGEFCNKDKNECLIEETCVNNSTCFNLH 252
>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 9/55 (16%)
Frame = -2
Query: 503 NCCRFGHTKVQCRSKPRCFKC--GQGHTGDTCN-------VEEDCVSCCLCSGLH 366
N C G + R + + F+C G+ G+ CN +EE CV+ C LH
Sbjct: 199 NICNHGRC-IPNRDEDKNFRCVCDSGYEGEFCNKDKNECLIEETCVNNSTCFNLH 252
>Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical
protein ZC84.6 protein.
Length = 1474
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -2
Query: 440 GQGHTGDTCNVEEDCVSCCLCSG 372
G G GD C DC++ C+G
Sbjct: 15 GSGRVGDACAFNTDCLAGMFCNG 37
>U80840-6|AAB37934.1| 317|Caenorhabditis elegans Hypothetical
protein F08D12.11 protein.
Length = 317
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 502 LKHWMVGYIYNLTGIEL 552
LKHW++G+I NL ++L
Sbjct: 239 LKHWIIGFIGNLNMVQL 255
>U50311-8|AAA92312.1| 145|Caenorhabditis elegans Hypothetical
protein C25E10.7 protein.
Length = 145
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/57 (31%), Positives = 23/57 (40%)
Frame = -2
Query: 509 CFNCCRFGHTKVQCRSKPRCFKCGQGHTGDTCNVEEDCVSCCLCSGLHFASSKKCPE 339
C C F T KP C G+ +T N DCV C+ A + +CPE
Sbjct: 31 CEPQCGFDPTVCSLECKPNACVCKDGYVRNTKN---DCVRRLECT----AETSRCPE 80
>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein (
C.elegans glp-1 gene,complete cds. ).
Length = 1295
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 9/55 (16%)
Frame = -2
Query: 503 NCCRFGHTKVQCRSKPRCFKC--GQGHTGDTCN-------VEEDCVSCCLCSGLH 366
N C G + R + + F+C G+ G+ CN +EE CV+ C LH
Sbjct: 199 NICNHGRC-IPNRDEDKNFRCVCDSGYEGEFCNKDKNECLIEETCVNNSTCFNLH 252
>AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc
finger protein protein.
Length = 384
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = -2
Query: 452 CFKCGQGHTGDTCNVEEDCVSCCLCSGLHFASSKKCPEYVRQTDIKVTMAENSLSYIEAS 273
CF CG D + C C+ F S KCP + T+ + A+ L+Y++
Sbjct: 241 CFICGNPFV-DPIVTKCKHYFCTGCALKSFQKSSKCPICQQNTENIMNTAKELLTYLKRK 299
Query: 272 K 270
K
Sbjct: 300 K 300
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,320,084
Number of Sequences: 27780
Number of extensions: 399936
Number of successful extensions: 1430
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1427
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -