Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0387
(684 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. 27 0.22
AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta... 27 0.22
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 24 1.2
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 23 2.1
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 23 3.6
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 3.6
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 4.7
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 22 6.3
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 6.3
DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein ... 21 8.3
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 8.3
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 8.3
>AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein.
Length = 145
Score = 26.6 bits (56), Expect = 0.22
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 568 RLGKTCPSNVNTTVCEGF 621
RL +TC +++ T CEGF
Sbjct: 55 RLKRTCSGDISVTKCEGF 72
>AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta
protein precursor protein.
Length = 145
Score = 26.6 bits (56), Expect = 0.22
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 568 RLGKTCPSNVNTTVCEGF 621
RL +TC +++ T CEGF
Sbjct: 55 RLKRTCSGDISVTKCEGF 72
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = -2
Query: 470 CRSKPRCFKCGQGHTGDTCNVEEDCVSCCLC 378
CR + CF D C+ E C + C C
Sbjct: 737 CRYEAHCFALCHCCDFDACDCEMTCPAGCKC 767
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Frame = +1
Query: 562 NTRLG--KTCPSNVNTTVCEGFHV 627
N RLG CP+N+ TTV H+
Sbjct: 261 NDRLGFLTFCPTNLGTTVRASVHI 284
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 653 YKVMINNTPTWKPSQTVVFTFDGQ 582
YKV+ PT P T+ DGQ
Sbjct: 50 YKVVDQTGPTHAPIFTIAVQIDGQ 73
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 221 PTKSVPGGNTVLPGSPSSRTISYKKTVFTK 132
P + N LP PS+ T + K+ +F+K
Sbjct: 664 PDSFIEAPNKTLPSLPSTLTKNSKQGLFSK 693
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 497 CRFGHTKVQCRSKPRCFKC 441
C G T V+ +SKP F C
Sbjct: 1711 CASGCTAVETKSKPYKFHC 1729
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 21.8 bits (44), Expect = 6.3
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 223 REDTISANDLEMGGCNFD 276
R D S N+LE G N+D
Sbjct: 122 RADANSVNELESQGFNYD 139
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.8 bits (44), Expect = 6.3
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -2
Query: 92 VAHESLVRDYNMPEPSNGCA-LPSSSNANS 6
V HE +V + P P+ A PSSS ++S
Sbjct: 499 VIHEPVVETNSSPSPNPRIASAPSSSTSSS 528
>DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein 5
protein.
Length = 104
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -3
Query: 190 YCLVHHPHVQYLIKKQSSLNPELLLN 113
+C++ H + KK L PE+L N
Sbjct: 38 HCILDRGHCDVIGKKIKELLPEVLNN 63
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/32 (21%), Positives = 16/32 (50%)
Frame = +2
Query: 344 DTFCSKQSAAQNISSKIHSLPPHYKYLQCGPD 439
D S ++ + + S + PP + + +C P+
Sbjct: 452 DLSVSGEAGIEEVKSPVLRSPPAFSHSRCPPE 483
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/32 (21%), Positives = 16/32 (50%)
Frame = +2
Query: 344 DTFCSKQSAAQNISSKIHSLPPHYKYLQCGPD 439
D S ++ + + S + PP + + +C P+
Sbjct: 452 DLSVSGEAGIEEVKSPVLRSPPAFSHSRCPPE 483
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,528
Number of Sequences: 438
Number of extensions: 4502
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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