Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0384
         (654 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061110-1|AAL28658.1|  221|Drosophila melanogaster LD09559p pro...   280   1e-75
AE013599-451|AAM71098.1|  221|Drosophila melanogaster CG30499-PA...   280   1e-75
BT003492-1|AAO39495.1|  766|Drosophila melanogaster RE55430p pro...    38   0.009
AE014297-2928|AAF55848.1|  766|Drosophila melanogaster CG7034-PA...    38   0.009
AF189221-1|AAF61856.1|  743|Drosophila melanogaster HERC2 protein.     29   7.3  
BT016130-1|AAV37015.1|  275|Drosophila melanogaster GH19958p pro...    28   9.6  
AY061310-1|AAL28858.1|  215|Drosophila melanogaster LD22863p pro...    28   9.6  
AF006955-1|AAB96894.1|  275|Drosophila melanogaster rolling ston...    28   9.6  
AE014134-1590|AAF52733.1|  275|Drosophila melanogaster CG9552-PA...    28   9.6  

>AY061110-1|AAL28658.1|  221|Drosophila melanogaster LD09559p
           protein.
          Length = 221

 Score =  280 bits (686), Expect = 1e-75
 Identities = 129/170 (75%), Positives = 148/170 (87%)
 Frame = +1

Query: 145 LKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPVVKCLRGKIK 324
           ++A IGPSILNADLS L  ESQKLLDNGADYLHLDVMDG FVPNLTFGHP+VK LR KIK
Sbjct: 3   VQAKIGPSILNADLSNLAAESQKLLDNGADYLHLDVMDGTFVPNLTFGHPMVKSLRNKIK 62

Query: 325 DAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGT 504
            AFFETHMMV+ PEQWI PMADAGVN YTFH+EPV+DV+ V R+V+E GMKVG+AIKPGT
Sbjct: 63  TAFFETHMMVQNPEQWIEPMADAGVNLYTFHVEPVQDVVRVSRRVQESGMKVGLAIKPGT 122

Query: 505 PVSEVEKYISISDMVLIMTVEPXFGGQKFMENQMAKVQYLRENYPLLDIE 654
            V ++EKY+SI+D+VL+MTVEP FGGQ FM + M KV++LRENYP LDIE
Sbjct: 123 EVQDLEKYLSIADVVLVMTVEPGFGGQSFMADMMPKVKWLRENYPNLDIE 172


>AE013599-451|AAM71098.1|  221|Drosophila melanogaster CG30499-PA
           protein.
          Length = 221

 Score =  280 bits (686), Expect = 1e-75
 Identities = 129/170 (75%), Positives = 148/170 (87%)
 Frame = +1

Query: 145 LKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPVVKCLRGKIK 324
           ++A IGPSILNADLS L  ESQKLLDNGADYLHLDVMDG FVPNLTFGHP+VK LR KIK
Sbjct: 3   VQAKIGPSILNADLSNLAAESQKLLDNGADYLHLDVMDGTFVPNLTFGHPMVKSLRNKIK 62

Query: 325 DAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGT 504
            AFFETHMMV+ PEQWI PMADAGVN YTFH+EPV+DV+ V R+V+E GMKVG+AIKPGT
Sbjct: 63  TAFFETHMMVQNPEQWIEPMADAGVNLYTFHVEPVQDVVRVSRRVQESGMKVGLAIKPGT 122

Query: 505 PVSEVEKYISISDMVLIMTVEPXFGGQKFMENQMAKVQYLRENYPLLDIE 654
            V ++EKY+SI+D+VL+MTVEP FGGQ FM + M KV++LRENYP LDIE
Sbjct: 123 EVQDLEKYLSIADVVLVMTVEPGFGGQSFMADMMPKVKWLRENYPNLDIE 172


>BT003492-1|AAO39495.1|  766|Drosophila melanogaster RE55430p
           protein.
          Length = 766

 Score = 38.3 bits (85), Expect = 0.009
 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
 Frame = +1

Query: 187 SQLYEESQKLLDNGA-DYLHLDVMDGQFVPNLTFGHPVVKCLRGKIKDAFFETHMMVEKP 363
           S +Y+E  K +  GA   ++LD+M  +F        PV     G++   F     +++  
Sbjct: 640 SIMYDEDVKQISTGALTQINLDLMQCEF---FAASEPVPGLKEGELSKYFLRNRQLLDLL 696

Query: 364 --EQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMK 477
             E+W T   D G  +  +H+   + +I +  K+RE   K
Sbjct: 697 ILEEWSTYFHDYGKQENRYHLVQPQSIIVILEKIREADKK 736


>AE014297-2928|AAF55848.1|  766|Drosophila melanogaster CG7034-PA
           protein.
          Length = 766

 Score = 38.3 bits (85), Expect = 0.009
 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
 Frame = +1

Query: 187 SQLYEESQKLLDNGA-DYLHLDVMDGQFVPNLTFGHPVVKCLRGKIKDAFFETHMMVEKP 363
           S +Y+E  K +  GA   ++LD+M  +F        PV     G++   F     +++  
Sbjct: 640 SIMYDEDVKQISTGALTQINLDLMQCEF---FAASEPVPGLKEGELSKYFLRNRQLLDLL 696

Query: 364 --EQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMK 477
             E+W T   D G  +  +H+   + +I +  K+RE   K
Sbjct: 697 ILEEWSTYFHDYGKQENRYHLVQPQSIIVILEKIREADKK 736


>AF189221-1|AAF61856.1|  743|Drosophila melanogaster HERC2 protein.
          Length = 743

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = +1

Query: 388 DAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVS 513
           +AG N+  F ++P    +      R  G+ +G+A++ G+P+S
Sbjct: 430 EAGANRDCFLLDPTLSSVLQMNMFRFLGVLMGIAVRTGSPLS 471


>BT016130-1|AAV37015.1|  275|Drosophila melanogaster GH19958p
           protein.
          Length = 275

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -1

Query: 477 LHSVLSNFSAHFYYIFDRFYMKCVLIDSSISHWCYPLL 364
           LH V     A F+++F   Y  C   D   +H+ YP+L
Sbjct: 186 LHMVYGMSLAIFFFLFTLIYHLCGGTDEFGNHYVYPIL 223


>AY061310-1|AAL28858.1|  215|Drosophila melanogaster LD22863p
           protein.
          Length = 215

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -1

Query: 477 LHSVLSNFSAHFYYIFDRFYMKCVLIDSSISHWCYPLL 364
           LH V     A F+++F   Y  C   D   +H+ YP+L
Sbjct: 126 LHMVYGMSLAIFFFLFTLIYHLCGGTDEFGNHYVYPIL 163


>AF006955-1|AAB96894.1|  275|Drosophila melanogaster rolling stone
           protein.
          Length = 275

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -1

Query: 477 LHSVLSNFSAHFYYIFDRFYMKCVLIDSSISHWCYPLL 364
           LH V     A F+++F   Y  C   D   +H+ YP+L
Sbjct: 186 LHMVYGMSLAIFFFLFTLIYHLCGGTDEFGNHYVYPIL 223


>AE014134-1590|AAF52733.1|  275|Drosophila melanogaster CG9552-PA
           protein.
          Length = 275

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -1

Query: 477 LHSVLSNFSAHFYYIFDRFYMKCVLIDSSISHWCYPLL 364
           LH V     A F+++F   Y  C   D   +H+ YP+L
Sbjct: 186 LHMVYGMSLAIFFFLFTLIYHLCGGTDEFGNHYVYPIL 223


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,424,261
Number of Sequences: 53049
Number of extensions: 477790
Number of successful extensions: 973
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)