Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0383
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    24   1.0  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    24   1.0  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.1  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.4  

>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -2

Query: 188 AGFLGSTATRTTGDTLNFITFMLWAFLKVVMVPVLTK 78
           +GF     T    D  N++TF    F+ V++  +L K
Sbjct: 32  SGFENFVKTYLVSDFENYVTFFCSLFIVVILKLILAK 68


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -1

Query: 669 NFIEVLNSFGAIHQDVGAGTLGAKAPNLTGFG 574
           N ++ +N+    +Q  G   +G  AP+   FG
Sbjct: 325 NHMQAMNNMAGTYQMTGYSAMGMAAPHHQNFG 356


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +1

Query: 187 ADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAG 288
           AD  KLV GL    +S  +    N + G  IVAG
Sbjct: 255 ADPGKLVLGLGVYGRSFTLASASNNKLGAPIVAG 288


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 68  TPTRPQMLPEGTSSIASHNVP 6
           T  +PQ+LP+  S I + ++P
Sbjct: 267 TDFKPQVLPQWPSPIGASHLP 287



 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 621  GAGTLGAKAPNLTGF 577
            G G+ G+K+P + GF
Sbjct: 1119 GPGSTGSKSPPVAGF 1133


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 371 TGSDFLIGMQAWSSSRSLRQISRWS 297
           TG +        + S SLR  SRWS
Sbjct: 345 TGGNSASNSSGDAQSTSLRPFSRWS 369


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 151 PVVRVAVEPKNPADLPKLV 207
           PV+R+ V   NP D   L+
Sbjct: 480 PVMRICVSAWNPKDCDPLI 498


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.136    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,559
Number of Sequences: 336
Number of extensions: 3935
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)